RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 C11orf95C9JLR9 678 aaPredicted RBP23.46■■□□□ 1.35
LIN54-204ENST00000505397 NBPF8Q3BBV2 869 aa23.46■■□□□ 1.35
LIN54-204ENST00000505397 AFAP1Q8N556 730 aa23.46■■□□□ 1.35
LIN54-204ENST00000505397 SCAPERQ9BY12 1400 aa23.45■■□□□ 1.34
LIN54-204ENST00000505397 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
LIN54-204ENST00000505397 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
LIN54-204ENST00000505397 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
LIN54-204ENST00000505397 POLR1AO95602 1720 aaPredicted RBP23.44■■□□□ 1.34
LIN54-204ENST00000505397 CD109Q6YHK3 1445 aa23.43■■□□□ 1.34
LIN54-204ENST00000505397 IQGAP3Q86VI3 1631 aa23.43■■□□□ 1.34
LIN54-204ENST00000505397 ATP7AQ04656 1500 aa23.43■■□□□ 1.34
LIN54-204ENST00000505397 INO80Q9ULG1 1556 aaPredicted RBP23.43■■□□□ 1.34
LIN54-204ENST00000505397 HNRNPUQ00839 825 aaKnown RBP eCLIP23.42■■□□□ 1.34
LIN54-204ENST00000505397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.41■■□□□ 1.34
LIN54-204ENST00000505397 CYB5RLQ6IPT4 315 aa23.4■■□□□ 1.34
LIN54-204ENST00000505397 MYT1LQ9UL68 1186 aa23.39■■□□□ 1.34
LIN54-204ENST00000505397 MAGI2Q86UL8 1455 aa23.39■■□□□ 1.34
LIN54-204ENST00000505397 PRKRIP1Q9H875 184 aaPredicted RBP23.39■■□□□ 1.33
LIN54-204ENST00000505397 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
LIN54-204ENST00000505397 CCDC184Q52MB2 194 aa23.35■■□□□ 1.33
LIN54-204ENST00000505397 KIF7Q2M1P5 1343 aa23.33■■□□□ 1.33
LIN54-204ENST00000505397 CCDC144AA2RUR9 1427 aa23.3■■□□□ 1.32
LIN54-204ENST00000505397 KIDINS220Q9ULH0 1771 aa23.29■■□□□ 1.32
LIN54-204ENST00000505397 DEPDC5O75140 1603 aa23.29■■□□□ 1.32
LIN54-204ENST00000505397 EIF2AK4Q9P2K8 1649 aaKnown RBP23.29■■□□□ 1.32
LIN54-204ENST00000505397 POGZQ7Z3K3 1410 aa23.28■■□□□ 1.32
LIN54-204ENST00000505397 NEO1Q92859 1461 aa23.28■■□□□ 1.32
LIN54-204ENST00000505397 RBM19Q9Y4C8 960 aaKnown RBP23.27■■□□□ 1.32
LIN54-204ENST00000505397 KDM5CP41229 1560 aa23.26■■□□□ 1.31
LIN54-204ENST00000505397 ERICH6BQ5W0A0 696 aa23.26■■□□□ 1.31
LIN54-204ENST00000505397 MAP3K4Q9Y6R4 1608 aa23.26■■□□□ 1.31
LIN54-204ENST00000505397 DHX29Q7Z478 1369 aaKnown RBP23.25■■□□□ 1.31
LIN54-204ENST00000505397 ANP32EQ9BTT0 268 aa23.24■■□□□ 1.31
LIN54-204ENST00000505397 KANK1Q14678 1352 aa23.24■■□□□ 1.31
LIN54-204ENST00000505397 HECW2Q9P2P5 1572 aa23.24■■□□□ 1.31
LIN54-204ENST00000505397 ZNF326Q5BKZ1 582 aaKnown RBP23.23■■□□□ 1.31
LIN54-204ENST00000505397 GLI2P10070 1586 aa23.23■■□□□ 1.31
LIN54-204ENST00000505397 ZBED9Q6R2W3 1325 aa23.23■■□□□ 1.31
LIN54-204ENST00000505397 MRS2Q9HD23 443 aa23.22■■□□□ 1.31
LIN54-204ENST00000505397 BCORL1Q5H9F3 1711 aa23.21■■□□□ 1.31
LIN54-204ENST00000505397 KIF3BO15066 747 aa23.21■■□□□ 1.31
LIN54-204ENST00000505397 UHRF1BP1Q6BDS2 1440 aa23.21■■□□□ 1.31
LIN54-204ENST00000505397 E9PCH4 1651 aa23.2■■□□□ 1.31
LIN54-204ENST00000505397 TET3O43151 1660 aa23.2■■□□□ 1.31
LIN54-204ENST00000505397 ATP10AO60312 1499 aa23.2■■□□□ 1.3
LIN54-204ENST00000505397 PLA2R1Q13018 1463 aa23.2■■□□□ 1.3
LIN54-204ENST00000505397 MLH3Q9UHC1 1453 aa23.2■■□□□ 1.3
LIN54-204ENST00000505397 PRDM15P57071 1507 aaPredicted RBP23.19■■□□□ 1.3
LIN54-204ENST00000505397 A2MP01023 1474 aa23.18■■□□□ 1.3
LIN54-204ENST00000505397 ARID4BQ4LE39 1312 aaPredicted RBP23.18■■□□□ 1.3
LIN54-204ENST00000505397 USP47Q96K76 1375 aa23.18■■□□□ 1.3
LIN54-204ENST00000505397 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
LIN54-204ENST00000505397 DIP2BQ9P265 1576 aa23.17■■□□□ 1.3
LIN54-204ENST00000505397 VWDEQ8N2E2 1590 aa23.16■■□□□ 1.3
LIN54-204ENST00000505397 DCAF11Q8TEB1 546 aa23.16■■□□□ 1.3
LIN54-204ENST00000505397 SPHKAPQ2M3C7 1700 aa23.15■■□□□ 1.3
LIN54-204ENST00000505397 RALGAPBQ86X10 1494 aa23.15■■□□□ 1.3
LIN54-204ENST00000505397 MROH1Q8NDA8 1641 aa23.15■■□□□ 1.3
LIN54-204ENST00000505397 KDM2AQ9Y2K7 1162 aa23.14■■□□□ 1.3
LIN54-204ENST00000505397 IRX6P78412 446 aaPredicted RBP23.14■■□□□ 1.29
LIN54-204ENST00000505397 ABCA6Q8N139 1617 aa23.13■■□□□ 1.29
LIN54-204ENST00000505397 RICTORQ6R327 1708 aa23.13■■□□□ 1.29
LIN54-204ENST00000505397 FAM69CQ0P6D2 419 aa23.12■■□□□ 1.29
LIN54-204ENST00000505397 TRPM2O94759 1503 aa23.12■■□□□ 1.29
LIN54-204ENST00000505397 RNF17Q9BXT8 1623 aaKnown RBP23.12■■□□□ 1.29
LIN54-204ENST00000505397 RAPGEF3O95398 923 aa23.1■■□□□ 1.29
LIN54-204ENST00000505397 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
LIN54-204ENST00000505397 PPP4R2Q9NY27 417 aa23.1■■□□□ 1.29
LIN54-204ENST00000505397 FRMPD1Q5SYB0 1578 aa23.09■■□□□ 1.29
LIN54-204ENST00000505397 TSPOAP1O95153 1857 aa23.08■■□□□ 1.29
LIN54-204ENST00000505397 CEP152O94986 1710 aa23.07■■□□□ 1.28
LIN54-204ENST00000505397 ROCK2O75116 1388 aaKnown RBP23.06■■□□□ 1.28
LIN54-204ENST00000505397 EFCAB6Q5THR3 1501 aa23.06■■□□□ 1.28
LIN54-204ENST00000505397 PTPRTO14522 1441 aa23.06■■□□□ 1.28
LIN54-204ENST00000505397 DIP2CQ9Y2E4 1556 aa23.05■■□□□ 1.28
LIN54-204ENST00000505397 CARD11Q9BXL7 1154 aa23.05■■□□□ 1.28
LIN54-204ENST00000505397 PRAG1Q86YV5 1406 aa23.05■■□□□ 1.28
LIN54-204ENST00000505397 TRPM1Q7Z4N2 1603 aa23.04■■□□□ 1.28
LIN54-204ENST00000505397 LMTK2Q8IWU2 1503 aa23.03■■□□□ 1.28
LIN54-204ENST00000505397 SMG6Q86US8 1419 aaKnown RBP23.03■■□□□ 1.28
LIN54-204ENST00000505397 CLTCL1P53675 1640 aa23.03■■□□□ 1.28
LIN54-204ENST00000505397 PPRC1Q5VV67 1664 aaKnown RBP23.03■■□□□ 1.28
LIN54-204ENST00000505397 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
LIN54-204ENST00000505397 GGT6Q6P531 493 aa23■■□□□ 1.27
LIN54-204ENST00000505397 ZMYM4Q5VZL5 1548 aa22.97■■□□□ 1.27
LIN54-204ENST00000505397 KIF1BO60333 1816 aa22.95■■□□□ 1.27
LIN54-204ENST00000505397 KIF13AQ9H1H9 1805 aa22.95■■□□□ 1.26
LIN54-204ENST00000505397 RNF123Q5XPI4 1314 aa22.95■■□□□ 1.26
LIN54-204ENST00000505397 YEATS2Q9ULM3 1422 aa22.95■■□□□ 1.26
LIN54-204ENST00000505397 PNISRQ8TF01 805 aaKnown RBP22.95■■□□□ 1.26
LIN54-204ENST00000505397 MSH5O43196 834 aa22.94■■□□□ 1.26
LIN54-204ENST00000505397 LAMC1P11047 1609 aa22.93■■□□□ 1.26
LIN54-204ENST00000505397 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
LIN54-204ENST00000505397 ABCC3O15438 1527 aa22.93■■□□□ 1.26
LIN54-204ENST00000505397 KTN1Q86UP2 1357 aaKnown RBP22.93■■□□□ 1.26
LIN54-204ENST00000505397 NEURL4Q96JN8 1562 aa22.92■■□□□ 1.26
LIN54-204ENST00000505397 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
LIN54-204ENST00000505397 POLR3GLQ9BT43 218 aa22.92■■□□□ 1.26
LIN54-204ENST00000505397 CAMSAP1Q5T5Y3 1602 aa22.91■■□□□ 1.26
LIN54-204ENST00000505397 ST20-MTHFSA0A0A6YYL1 179 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms