RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 LTBP4Q8N2S1 1624 aa12.26□□□□□ -0.45
MATR3-210ENST00000504643 CEP170BQ9Y4F5 1589 aaPredicted RBP12.26□□□□□ -0.45
MATR3-210ENST00000504643 APLP2Q06481 763 aa12.25□□□□□ -0.45
MATR3-210ENST00000504643 TNRQ92752 1358 aa12.25□□□□□ -0.45
MATR3-210ENST00000504643 MIA2Q96PC5 1412 aa12.25□□□□□ -0.45
MATR3-210ENST00000504643 TCOF1Q13428 1488 aaKnown RBP12.25□□□□□ -0.45
MATR3-210ENST00000504643 ZNF142P52746 1687 aaPredicted RBP12.25□□□□□ -0.45
MATR3-210ENST00000504643 LRRC9Q6ZRR7 1453 aa12.25□□□□□ -0.45
MATR3-210ENST00000504643 KDM5DQ9BY66 1539 aa12.24□□□□□ -0.45
MATR3-210ENST00000504643 PZPP20742 1482 aa12.24□□□□□ -0.45
MATR3-210ENST00000504643 ANKLE2Q86XL3 938 aa12.24□□□□□ -0.45
MATR3-210ENST00000504643 MYO3AQ8NEV4 1616 aa12.24□□□□□ -0.45
MATR3-210ENST00000504643 NLRP1Q9C000 1473 aa12.22□□□□□ -0.45
MATR3-210ENST00000504643 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.45
MATR3-210ENST00000504643 ZNF335Q9H4Z2 1342 aaPredicted RBP12.21□□□□□ -0.46
MATR3-210ENST00000504643 FBXO31Q5XUX0 539 aaPredicted RBP12.21□□□□□ -0.46
MATR3-210ENST00000504643 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
MATR3-210ENST00000504643 UBAP1LF5GYI3 381 aa12.2□□□□□ -0.46
MATR3-210ENST00000504643 MAST1Q9Y2H9 1570 aa12.2□□□□□ -0.46
MATR3-210ENST00000504643 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
MATR3-210ENST00000504643 DNMT1P26358 1616 aaKnown RBP12.19□□□□□ -0.46
MATR3-210ENST00000504643 TOM1O60784 492 aa12.18□□□□□ -0.46
MATR3-210ENST00000504643 CPS1P31327 1500 aa12.17□□□□□ -0.46
MATR3-210ENST00000504643 KANK4Q5T7N3 995 aaPredicted RBP12.17□□□□□ -0.46
MATR3-210ENST00000504643 EIF2AK4Q9P2K8 1649 aaKnown RBP12.16□□□□□ -0.46
MATR3-210ENST00000504643 DUOX2Q9NRD8 1548 aa12.15□□□□□ -0.46
MATR3-210ENST00000504643 UGGT1Q9NYU2 1555 aa12.15□□□□□ -0.46
MATR3-210ENST00000504643 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.15□□□□□ -0.468e-25■■■□□ 16.6
MATR3-210ENST00000504643 ZC3H13Q5T200 1668 aaKnown RBP12.15□□□□□ -0.46
MATR3-210ENST00000504643 MED14O60244 1454 aa12.15□□□□□ -0.46
MATR3-210ENST00000504643 RNF17Q9BXT8 1623 aaKnown RBP12.14□□□□□ -0.47
MATR3-210ENST00000504643 SHANK2Q9UPX8 1470 aa12.14□□□□□ -0.47
MATR3-210ENST00000504643 NPHP4O75161 1426 aaPredicted RBP12.13□□□□□ -0.47
MATR3-210ENST00000504643 KANK1Q14678 1352 aa12.13□□□□□ -0.47
MATR3-210ENST00000504643 ERBINQ96RT1 1412 aa12.13□□□□□ -0.47
MATR3-210ENST00000504643 ABCC3O15438 1527 aa12.13□□□□□ -0.47
MATR3-210ENST00000504643 ARHGAP31Q2M1Z3 1444 aa12.13□□□□□ -0.47
MATR3-210ENST00000504643 DEPDC5O75140 1603 aa12.12□□□□□ -0.47
MATR3-210ENST00000504643 SPATA31D1Q6ZQQ2 1576 aa12.12□□□□□ -0.47
MATR3-210ENST00000504643 SOCS7O14512 581 aa12.12□□□□□ -0.47
MATR3-210ENST00000504643 KIF15Q9NS87 1388 aa12.11□□□□□ -0.47
MATR3-210ENST00000504643 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
MATR3-210ENST00000504643 EID1Q9Y6B2 187 aa12.11□□□□□ -0.47
MATR3-210ENST00000504643 ERVK-7P63135 1459 aa12.1□□□□□ -0.47
MATR3-210ENST00000504643 ANKRD30AQ9BXX3 1397 aa12.1□□□□□ -0.47
MATR3-210ENST00000504643 RRP7BPQ9NSQ0 103 aa12.1□□□□□ -0.47
MATR3-210ENST00000504643 ABCC5O15440 1437 aa12.09□□□□□ -0.47
MATR3-210ENST00000504643 NEURL4Q96JN8 1562 aa12.09□□□□□ -0.47
MATR3-210ENST00000504643 DAPK1P53355 1430 aa12.07□□□□□ -0.48
MATR3-210ENST00000504643 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
MATR3-210ENST00000504643 STAG3Q9UJ98 1225 aa12.07□□□□□ -0.48
MATR3-210ENST00000504643 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
MATR3-210ENST00000504643 FGD6Q6ZV73 1430 aa12.07□□□□□ -0.48
MATR3-210ENST00000504643 PTPN23Q9H3S7 1636 aa12.06□□□□□ -0.48
MATR3-210ENST00000504643 ILDR2Q71H61 639 aa12.06□□□□□ -0.48
MATR3-210ENST00000504643 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.06□□□□□ -0.481e-9■■□□□ 14.5
MATR3-210ENST00000504643 PIP4K2BP78356 416 aa12.06□□□□□ -0.48
MATR3-210ENST00000504643 PRDM15P57071 1507 aaPredicted RBP12.05□□□□□ -0.48
MATR3-210ENST00000504643 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
MATR3-210ENST00000504643 SCAF11Q99590 1463 aaKnown RBP12.05□□□□□ -0.48
MATR3-210ENST00000504643 MROH1Q8NDA8 1641 aa12.05□□□□□ -0.48
MATR3-210ENST00000504643 SLC52A1Q9NWF4 448 aa12.05□□□□□ -0.48
MATR3-210ENST00000504643 IQGAP1P46940 1657 aa12.04□□□□□ -0.48
MATR3-210ENST00000504643 HDGFP51858 240 aaKnown RBP12.04□□□□□ -0.48
MATR3-210ENST00000504643 HSPA1LP34931 641 aa12.04□□□□□ -0.48
MATR3-210ENST00000504643 SLIT1O75093 1534 aa12.03□□□□□ -0.48
MATR3-210ENST00000504643 ARHGAP23Q9P227 1491 aa12.03□□□□□ -0.48
MATR3-210ENST00000504643 LMTK2Q8IWU2 1503 aa12.03□□□□□ -0.48
MATR3-210ENST00000504643 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
MATR3-210ENST00000504643 TMEM2Q9UHN6 1383 aa12.02□□□□□ -0.49
MATR3-210ENST00000504643 CROCC2H7BZ55 1655 aa12.01□□□□□ -0.49
MATR3-210ENST00000504643 LTKP29376 864 aa12.01□□□□□ -0.49
MATR3-210ENST00000504643 IDI1Q13907 227 aa12□□□□□ -0.49
MATR3-210ENST00000504643 ADGRL2O95490 1459 aa12□□□□□ -0.49
MATR3-210ENST00000504643 LRRC7Q96NW7 1537 aa12□□□□□ -0.49
MATR3-210ENST00000504643 SYNMO15061 1565 aa12□□□□□ -0.49
MATR3-210ENST00000504643 CEP152O94986 1710 aa12□□□□□ -0.49
MATR3-210ENST00000504643 UBR1Q8IWV7 1749 aa12□□□□□ -0.49
MATR3-210ENST00000504643 FAM50AQ14320 339 aaKnown RBP11.99□□□□□ -0.49
MATR3-210ENST00000504643 KDM5AP29375 1690 aaKnown RBP11.99□□□□□ -0.49
MATR3-210ENST00000504643 RPRD2Q5VT52 1461 aaKnown RBP11.98□□□□□ -0.49
MATR3-210ENST00000504643 KCNA6P17658 529 aa11.98□□□□□ -0.49
MATR3-210ENST00000504643 NOS1P29475 1434 aa11.98□□□□□ -0.49
MATR3-210ENST00000504643 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
MATR3-210ENST00000504643 ANKRD50Q9ULJ7 1429 aa11.97□□□□□ -0.49
MATR3-210ENST00000504643 PHF23Q9BUL5 403 aaPredicted RBP11.96□□□□□ -0.49
MATR3-210ENST00000504643 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.95□□□□□ -0.5
MATR3-210ENST00000504643 CFAP65Q6ZU64 1925 aaKnown RBP11.94□□□□□ -0.5
MATR3-210ENST00000504643 PIK3C2BO00750 1634 aa11.94□□□□□ -0.5
MATR3-210ENST00000504643 PROSER2Q86WR7 435 aaPredicted RBP11.94□□□□□ -0.5
MATR3-210ENST00000504643 BCANQ96GW7 911 aa11.94□□□□□ -0.5
MATR3-210ENST00000504643 ROCK1Q13464 1354 aa11.94□□□□□ -0.5
MATR3-210ENST00000504643 FAM135BQ49AJ0 1406 aa11.93□□□□□ -0.5
MATR3-210ENST00000504643 MED1Q15648 1581 aaPredicted RBP11.92□□□□□ -0.5
MATR3-210ENST00000504643 PPP1R15AO75807 674 aaPredicted RBP11.91□□□□□ -0.5
MATR3-210ENST00000504643 ADGRB3O60242 1522 aa11.91□□□□□ -0.5
MATR3-210ENST00000504643 TBX22Q9Y458 520 aa11.91□□□□□ -0.5
MATR3-210ENST00000504643 TMEM94Q12767 1356 aa11.91□□□□□ -0.5
MATR3-210ENST00000504643 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
MATR3-210ENST00000504643 PLEKHG1Q9ULL1 1385 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms