RNA–Protein interactions for RNA: ENST00000504233.5

PAPD4-207, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 1 (best) BASIC

Gene PAPD4, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-207ENST00000504233 CCDC141Q6ZP82 1450 aa15.33■□□□□ 0.04
PAPD4-207ENST00000504233 RALGAPBQ86X10 1494 aa15.32■□□□□ 0.04
PAPD4-207ENST00000504233 ROCK2O75116 1388 aaKnown RBP15.32■□□□□ 0.04
PAPD4-207ENST00000504233 CDC42BPBQ9Y5S2 1711 aa15.32■□□□□ 0.04
PAPD4-207ENST00000504233 TMC1Q8TDI8 760 aa15.31■□□□□ 0.04
PAPD4-207ENST00000504233 SYCP2Q9BX26 1530 aa15.31■□□□□ 0.04
PAPD4-207ENST00000504233 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
PAPD4-207ENST00000504233 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
PAPD4-207ENST00000504233 UHRF1BP1Q6BDS2 1440 aa15.3■□□□□ 0.04
PAPD4-207ENST00000504233 NBPF1Q3BBV0 1214 aa15.3■□□□□ 0.04
PAPD4-207ENST00000504233 ERCC6L2Q5T890 1561 aa15.3■□□□□ 0.04
PAPD4-207ENST00000504233 CHD1O14646 1710 aa15.3■□□□□ 0.04
PAPD4-207ENST00000504233 PPP4R2Q9NY27 417 aa15.3■□□□□ 0.04
PAPD4-207ENST00000504233 FAM135AQ9P2D6 1515 aa15.29■□□□□ 0.04
PAPD4-207ENST00000504233 TTC37Q6PGP7 1564 aa15.29■□□□□ 0.04
PAPD4-207ENST00000504233 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
PAPD4-207ENST00000504233 ARHGEF5Q12774 1597 aa15.28■□□□□ 0.04
PAPD4-207ENST00000504233 CCDC144AA2RUR9 1427 aa15.28■□□□□ 0.04
PAPD4-207ENST00000504233 PREX2Q70Z35 1606 aa15.27■□□□□ 0.04
PAPD4-207ENST00000504233 KDM5DQ9BY66 1539 aa15.27■□□□□ 0.04
PAPD4-207ENST00000504233 ARHGEF12Q9NZN5 1544 aa15.26■□□□□ 0.03
PAPD4-207ENST00000504233 PNISRQ8TF01 805 aaKnown RBP15.25■□□□□ 0.03
PAPD4-207ENST00000504233 PLEKHH2Q8IVE3 1493 aa15.25■□□□□ 0.03
PAPD4-207ENST00000504233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.25■□□□□ 0.03
PAPD4-207ENST00000504233 ARID4BQ4LE39 1312 aaPredicted RBP15.24■□□□□ 0.03
PAPD4-207ENST00000504233 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
PAPD4-207ENST00000504233 RSPH4AQ5TD94 716 aa15.24■□□□□ 0.03
PAPD4-207ENST00000504233 PLA2R1Q13018 1463 aa15.22■□□□□ 0.03
PAPD4-207ENST00000504233 NUDCQ9Y266 331 aa15.22■□□□□ 0.03
PAPD4-207ENST00000504233 PRAG1Q86YV5 1406 aa15.21■□□□□ 0.03
PAPD4-207ENST00000504233 ERICH6BQ5W0A0 696 aa15.2■□□□□ 0.02
PAPD4-207ENST00000504233 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
PAPD4-207ENST00000504233 SMG6Q86US8 1419 aaKnown RBP15.19■□□□□ 0.02
PAPD4-207ENST00000504233 MYBBP1AQ9BQG0 1328 aaKnown RBP15.19■□□□□ 0.02
PAPD4-207ENST00000504233 A2MP01023 1474 aa15.19■□□□□ 0.02
PAPD4-207ENST00000504233 ABCC2Q92887 1545 aa15.17■□□□□ 0.02
PAPD4-207ENST00000504233 RALBP1Q15311 655 aa15.16■□□□□ 0.02
PAPD4-207ENST00000504233 AFAP1Q8N556 730 aa15.16■□□□□ 0.02
PAPD4-207ENST00000504233 LAS1LQ9Y4W2 734 aaKnown RBP15.16■□□□□ 0.02
PAPD4-207ENST00000504233 DISP3Q9P2K9 1392 aa15.16■□□□□ 0.02
PAPD4-207ENST00000504233 EFCAB2Q5VUJ9 269 aa15.15■□□□□ 0.02
PAPD4-207ENST00000504233 MYO5CQ9NQX4 1742 aa15.15■□□□□ 0.02
PAPD4-207ENST00000504233 TRPM1Q7Z4N2 1603 aa15.15■□□□□ 0.02
PAPD4-207ENST00000504233 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
PAPD4-207ENST00000504233 MYT1LQ9UL68 1186 aa15.15■□□□□ 0.02
PAPD4-207ENST00000504233 SHROOM2Q13796 1616 aa15.14■□□□□ 0.01
PAPD4-207ENST00000504233 KTN1Q86UP2 1357 aaKnown RBP15.14■□□□□ 0.01
PAPD4-207ENST00000504233 UNC13BO14795 1591 aa15.13■□□□□ 0.01
PAPD4-207ENST00000504233 BRD4O60885 1362 aaPredicted RBP15.13■□□□□ 0.01
PAPD4-207ENST00000504233 TESK2Q96S53 571 aa15.13■□□□□ 0.01
PAPD4-207ENST00000504233 PANK3Q9H999 370 aa15.13■□□□□ 0.01
PAPD4-207ENST00000504233 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
PAPD4-207ENST00000504233 NLRP13Q86W25 1043 aa15.12■□□□□ 0.01
PAPD4-207ENST00000504233 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
PAPD4-207ENST00000504233 PER1O15534 1290 aaPredicted RBP15.11■□□□□ 0.01
PAPD4-207ENST00000504233 LRPPRCP42704 1394 aaKnown RBP15.11■□□□□ 0.01
PAPD4-207ENST00000504233 PLCH2O75038 1416 aa15.11■□□□□ 0.01
PAPD4-207ENST00000504233 SPAG9O60271 1321 aaKnown RBP15.1■□□□□ 0.01
PAPD4-207ENST00000504233 DUOX2Q9NRD8 1548 aa15.1■□□□□ 0.01
PAPD4-207ENST00000504233 NOP58Q9Y2X3 529 aaKnown RBP15.1■□□□□ 0.01
PAPD4-207ENST00000504233 ZCCHC11Q5TAX3 1644 aaKnown RBP15.09■□□□□ 0.01
PAPD4-207ENST00000504233 IQGAP3Q86VI3 1631 aa15.09■□□□□ 0.01
PAPD4-207ENST00000504233 E9PCH4 1651 aa15.09■□□□□ 0.01
PAPD4-207ENST00000504233 PLXNC1O60486 1568 aa15.09■□□□□ 0.01
PAPD4-207ENST00000504233 ERBINQ96RT1 1412 aa15.09■□□□□ 0.01
PAPD4-207ENST00000504233 GPRASP1Q5JY77 1395 aa15.08■□□□□ 0
PAPD4-207ENST00000504233 PARD3Q8TEW0 1356 aa15.08■□□□□ 0
PAPD4-207ENST00000504233 CDCA7LQ96GN5 454 aa15.08■□□□□ 0
PAPD4-207ENST00000504233 TMF1P82094 1093 aa15.08■□□□□ 0
PAPD4-207ENST00000504233 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
PAPD4-207ENST00000504233 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
PAPD4-207ENST00000504233 RNF123Q5XPI4 1314 aa15.07■□□□□ 0
PAPD4-207ENST00000504233 PRDM15P57071 1507 aaPredicted RBP15.05■□□□□ -0
PAPD4-207ENST00000504233 DAXXQ9UER7 740 aaPredicted RBP15.05■□□□□ -0
PAPD4-207ENST00000504233 ABCC1P33527 1531 aa15.05■□□□□ -0
PAPD4-207ENST00000504233 RCAN3Q9UKA8 241 aa15.04■□□□□ -0
PAPD4-207ENST00000504233 EXOC6Q8TAG9 804 aa15.03■□□□□ -0
PAPD4-207ENST00000504233 KIF3BO15066 747 aa15.03■□□□□ -0
PAPD4-207ENST00000504233 RRP1P56182 461 aaKnown RBP15.03■□□□□ -0
PAPD4-207ENST00000504233 MAGI2Q86UL8 1455 aa15.02□□□□□ -0.01
PAPD4-207ENST00000504233 PLIN1O60240 522 aa15.01□□□□□ -0.01
PAPD4-207ENST00000504233 EIF2AK4Q9P2K8 1649 aaKnown RBP15□□□□□ -0.01
PAPD4-207ENST00000504233 CLASP1Q7Z460 1538 aa15□□□□□ -0.01
PAPD4-207ENST00000504233 ATP10AO60312 1499 aa14.99□□□□□ -0.01
PAPD4-207ENST00000504233 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
PAPD4-207ENST00000504233 SCAPERQ9BY12 1400 aa14.98□□□□□ -0.01
PAPD4-207ENST00000504233 ADAMTS8Q9UP79 889 aa14.98□□□□□ -0.01
PAPD4-207ENST00000504233 BRPF3Q9ULD4 1205 aa14.97□□□□□ -0.01
PAPD4-207ENST00000504233 ZFYVE16Q7Z3T8 1539 aa14.97□□□□□ -0.01
PAPD4-207ENST00000504233 UHRF1BP1LA0JNW5 1464 aa14.97□□□□□ -0.01
PAPD4-207ENST00000504233 LAMC1P11047 1609 aa14.96□□□□□ -0.02
PAPD4-207ENST00000504233 FANCAO15360 1455 aa14.96□□□□□ -0.02
PAPD4-207ENST00000504233 CFAP70Q5T0N1 1121 aa14.95□□□□□ -0.02
PAPD4-207ENST00000504233 ZBTB47Q9UFB7 747 aaPredicted RBP14.95□□□□□ -0.02
PAPD4-207ENST00000504233 SKAP1Q86WV1 359 aa14.95□□□□□ -0.02
PAPD4-207ENST00000504233 ARXQ96QS3 562 aa14.95□□□□□ -0.02
PAPD4-207ENST00000504233 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
PAPD4-207ENST00000504233 CHGAP10645 457 aaKnown RBP14.94□□□□□ -0.02
PAPD4-207ENST00000504233 CLTCL1P53675 1640 aa14.94□□□□□ -0.02
PAPD4-207ENST00000504233 MADDQ8WXG6 1647 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms