RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 PTPRKQ15262 1439 aa40.36■■■■■ 4.05
CCDC149-203ENST00000502801 FAM50AQ14320 339 aaKnown RBP40.36■■■■■ 4.05
CCDC149-203ENST00000502801 KDM5DQ9BY66 1539 aa40.36■■■■■ 4.05
CCDC149-203ENST00000502801 FAM135AQ9P2D6 1515 aa40.36■■■■■ 4.05
CCDC149-203ENST00000502801 KIF15Q9NS87 1388 aa40.35■■■■■ 4.05
CCDC149-203ENST00000502801 RRP7BPQ9NSQ0 103 aa40.35■■■■■ 4.05
CCDC149-203ENST00000502801 WASHC2CQ9Y4E1 1318 aa40.35■■■■■ 4.05
CCDC149-203ENST00000502801 RNF17Q9BXT8 1623 aaKnown RBP40.34■■■■■ 4.05
CCDC149-203ENST00000502801 PPARGC1BQ86YN6 1023 aaKnown RBP40.32■■■■■ 4.05
CCDC149-203ENST00000502801 CHIC2Q9UKJ5 165 aa40.32■■■■■ 4.05
CCDC149-203ENST00000502801 ANKRD30AQ9BXX3 1397 aa40.25■■■■■ 4.03
CCDC149-203ENST00000502801 ERBINQ96RT1 1412 aa40.24■■■■■ 4.03
CCDC149-203ENST00000502801 MROH1Q8NDA8 1641 aa40.24■■■■■ 4.03
CCDC149-203ENST00000502801 STRCQ7RTU9 1775 aa40.23■■■■■ 4.03
CCDC149-203ENST00000502801 MYO3AQ8NEV4 1616 aa40.23■■■■■ 4.03
CCDC149-203ENST00000502801 PZPP20742 1482 aa40.21■■■■■ 4.03
CCDC149-203ENST00000502801 FBXO31Q5XUX0 539 aaPredicted RBP40.21■■■■■ 4.03
CCDC149-203ENST00000502801 NCOA1Q15788 1441 aa40.21■■■■■ 4.03
CCDC149-203ENST00000502801 ZC3H13Q5T200 1668 aaKnown RBP40.19■■■■■ 4.02
CCDC149-203ENST00000502801 ABCC3O15438 1527 aa40.19■■■■■ 4.02
CCDC149-203ENST00000502801 ADGRL2O95490 1459 aa40.17■■■■■ 4.02
CCDC149-203ENST00000502801 ZNF142P52746 1687 aaPredicted RBP40.16■■■■■ 4.02
CCDC149-203ENST00000502801 CEP170BQ9Y4F5 1589 aaPredicted RBP40.14■■■■■ 4.02
CCDC149-203ENST00000502801 CEP152O94986 1710 aa40.13■■■■■ 4.02
CCDC149-203ENST00000502801 TNRQ92752 1358 aa40.11■■■■■ 4.01
CCDC149-203ENST00000502801 CAMSAP1Q5T5Y3 1602 aa40.1■■■■■ 4.01
CCDC149-203ENST00000502801 DMRT2Q9Y5R5 561 aa40.1■■■■■ 4.01
CCDC149-203ENST00000502801 PRDM15P57071 1507 aaPredicted RBP40.1■■■■■ 4.01
CCDC149-203ENST00000502801 DEPDC5O75140 1603 aa40.08■■■■■ 4.01
CCDC149-203ENST00000502801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.07■■■■■ 4.01
CCDC149-203ENST00000502801 A2ML1A8K2U0 1454 aa40.05■■■■■ 4
CCDC149-203ENST00000502801 CFAP65Q6ZU64 1925 aaKnown RBP40.03■■■■■ 4
CCDC149-203ENST00000502801 KANK1Q14678 1352 aa39.98■■■■□ 3.99
CCDC149-203ENST00000502801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.98■■■■□ 3.99
CCDC149-203ENST00000502801 ILDR1Q86SU0 546 aaPredicted RBP39.98■■■■□ 3.99
CCDC149-203ENST00000502801 PTPRTO14522 1441 aa39.98■■■■□ 3.99
CCDC149-203ENST00000502801 SPATA31D1Q6ZQQ2 1576 aa39.97■■■■□ 3.99
CCDC149-203ENST00000502801 ANKRD50Q9ULJ7 1429 aa39.97■■■■□ 3.99
CCDC149-203ENST00000502801 PLA2R1Q13018 1463 aa39.96■■■■□ 3.99
CCDC149-203ENST00000502801 ITGAEP38570 1179 aa39.96■■■■□ 3.99
CCDC149-203ENST00000502801 ERVK-7P63135 1459 aa39.95■■■■□ 3.99
CCDC149-203ENST00000502801 NCKAP5LQ9HCH0 1330 aa39.94■■■■□ 3.98
CCDC149-203ENST00000502801 NLRP1Q9C000 1473 aa39.94■■■■□ 3.98
CCDC149-203ENST00000502801 ARHGAP31Q2M1Z3 1444 aa39.92■■■■□ 3.98
CCDC149-203ENST00000502801 ROCK1Q13464 1354 aa39.92■■■■□ 3.98
CCDC149-203ENST00000502801 VWDEQ8N2E2 1590 aa39.92■■■■□ 3.98
CCDC149-203ENST00000502801 PKD2Q13563 968 aa39.88■■■■□ 3.97
CCDC149-203ENST00000502801 LMTK2Q8IWU2 1503 aa39.87■■■■□ 3.97
CCDC149-203ENST00000502801 RRBP1Q9P2E9 1410 aaKnown RBP39.87■■■■□ 3.97
CCDC149-203ENST00000502801 UGGT1Q9NYU2 1555 aa39.84■■■■□ 3.97
CCDC149-203ENST00000502801 THEMISQ8N1K5 641 aaPredicted RBP39.82■■■■□ 3.97
CCDC149-203ENST00000502801 CERKQ8TCT0 537 aa39.79■■■■□ 3.96
CCDC149-203ENST00000502801 FBXO41Q8TF61 875 aa39.77■■■■□ 3.96
CCDC149-203ENST00000502801 POLR1AO95602 1720 aaPredicted RBP39.76■■■■□ 3.96
CCDC149-203ENST00000502801 EFCAB6Q5THR3 1501 aa39.75■■■■□ 3.95
CCDC149-203ENST00000502801 UNC13BO14795 1591 aa39.74■■■■□ 3.95
CCDC149-203ENST00000502801 ANKLE2Q86XL3 938 aa39.71■■■■□ 3.95
CCDC149-203ENST00000502801 UBR1Q8IWV7 1749 aa39.7■■■■□ 3.95
CCDC149-203ENST00000502801 NEURL4Q96JN8 1562 aa39.68■■■■□ 3.94
CCDC149-203ENST00000502801 TET3O43151 1660 aa39.67■■■■□ 3.94
CCDC149-203ENST00000502801 LTBP4Q8N2S1 1624 aa39.66■■■■□ 3.94
CCDC149-203ENST00000502801 NOS1P29475 1434 aa39.64■■■■□ 3.94
CCDC149-203ENST00000502801 SYNMO15061 1565 aa39.63■■■■□ 3.93
CCDC149-203ENST00000502801 PIK3C2BO00750 1634 aa39.62■■■■□ 3.93
CCDC149-203ENST00000502801 GCC2Q8IWJ2 1684 aa39.62■■■■□ 3.93
CCDC149-203ENST00000502801 RPRD2Q5VT52 1461 aaKnown RBP39.62■■■■□ 3.93
CCDC149-203ENST00000502801 ZNF335Q9H4Z2 1342 aaPredicted RBP39.61■■■■□ 3.93
CCDC149-203ENST00000502801 IQGAP3Q86VI3 1631 aa39.59■■■■□ 3.93
CCDC149-203ENST00000502801 IDI1Q13907 227 aa39.59■■■■□ 3.93
CCDC149-203ENST00000502801 NUP155O75694 1391 aa39.58■■■■□ 3.93
CCDC149-203ENST00000502801 MED14O60244 1454 aa39.56■■■■□ 3.92
CCDC149-203ENST00000502801 NPHP4O75161 1426 aaPredicted RBP39.55■■■■□ 3.92
CCDC149-203ENST00000502801 STAG3Q9UJ98 1225 aa39.54■■■■□ 3.92
CCDC149-203ENST00000502801 E9PCH4 1651 aa39.52■■■■□ 3.92
CCDC149-203ENST00000502801 NAIPQ13075 1403 aa39.51■■■■□ 3.92
CCDC149-203ENST00000502801 KDM5AP29375 1690 aaKnown RBP39.51■■■■□ 3.91
CCDC149-203ENST00000502801 SLIT1O75093 1534 aa39.5■■■■□ 3.91
CCDC149-203ENST00000502801 ARHGAP23Q9P227 1491 aa39.5■■■■□ 3.91
CCDC149-203ENST00000502801 SLC52A1Q9NWF4 448 aa39.5■■■■□ 3.91
CCDC149-203ENST00000502801 IQGAP1P46940 1657 aa39.5■■■■□ 3.91
CCDC149-203ENST00000502801 SCAF11Q99590 1463 aaKnown RBP39.47■■■■□ 3.91
CCDC149-203ENST00000502801 LTKP29376 864 aa39.46■■■■□ 3.91
CCDC149-203ENST00000502801 TXNDC2Q86VQ3 553 aa39.46■■■■□ 3.91
CCDC149-203ENST00000502801 TMEM2Q9UHN6 1383 aa39.44■■■■□ 3.9
CCDC149-203ENST00000502801 ADGRB3O60242 1522 aa39.42■■■■□ 3.9
CCDC149-203ENST00000502801 EID1Q9Y6B2 187 aa39.42■■■■□ 3.9
CCDC149-203ENST00000502801 IQSEC2Q5JU85 1478 aa39.41■■■■□ 3.9
CCDC149-203ENST00000502801 HFM1A2PYH4 1435 aa39.4■■■■□ 3.9
CCDC149-203ENST00000502801 MYO5BQ9ULV0 1848 aa39.35■■■■□ 3.89
CCDC149-203ENST00000502801 CPS1P31327 1500 aa39.3■■■■□ 3.88
CCDC149-203ENST00000502801 TMEM131LA2VDJ0 1609 aa39.3■■■■□ 3.88
CCDC149-203ENST00000502801 CHGAP10645 457 aaKnown RBP39.26■■■■□ 3.88
CCDC149-203ENST00000502801 TRIM52Q96A61 297 aa39.25■■■■□ 3.87
CCDC149-203ENST00000502801 SPHKAPQ2M3C7 1700 aa39.25■■■■□ 3.87
CCDC149-203ENST00000502801 STRCP1A6NGW2 1772 aa39.24■■■■□ 3.87
CCDC149-203ENST00000502801 ZFYVE9O95405 1425 aa39.2■■■■□ 3.87
CCDC149-203ENST00000502801 RIMS2Q9UQ26 1411 aa39.18■■■■□ 3.86
CCDC149-203ENST00000502801 UBAP1LF5GYI3 381 aa39.15■■■■□ 3.86
CCDC149-203ENST00000502801 HDGFP51858 240 aaKnown RBP39.15■■■■□ 3.86
CCDC149-203ENST00000502801 SLC26A8Q96RN1 970 aa39.12■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms