RNA–Protein interactions for RNA: ENST00000494819.5

GTF2B-207, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-207ENST00000494819 GGT6Q6P531 493 aa16.5■□□□□ 0.23
GTF2B-207ENST00000494819 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
GTF2B-207ENST00000494819 KIAA1107Q9UPP5 1409 aa16.48■□□□□ 0.23
GTF2B-207ENST00000494819 CPS1P31327 1500 aa16.48■□□□□ 0.23
GTF2B-207ENST00000494819 FYCO1Q9BQS8 1478 aa16.47■□□□□ 0.23
GTF2B-207ENST00000494819 ALKQ9UM73 1620 aa16.46■□□□□ 0.23
GTF2B-207ENST00000494819 SHANK2Q9UPX8 1470 aa16.46■□□□□ 0.23
GTF2B-207ENST00000494819 PLEKHH2Q8IVE3 1493 aa16.45■□□□□ 0.22
GTF2B-207ENST00000494819 POLR1AO95602 1720 aaPredicted RBP16.45■□□□□ 0.22
GTF2B-207ENST00000494819 TOM1O60784 492 aa16.44■□□□□ 0.22
GTF2B-207ENST00000494819 VWDEQ8N2E2 1590 aa16.43■□□□□ 0.22
GTF2B-207ENST00000494819 CFDP1Q9UEE9 299 aaPredicted RBP16.42■□□□□ 0.22
GTF2B-207ENST00000494819 ADGBQ8N7X0 1667 aa16.42■□□□□ 0.22
GTF2B-207ENST00000494819 TNRQ92752 1358 aa16.41■□□□□ 0.22
GTF2B-207ENST00000494819 FBXO31Q5XUX0 539 aaPredicted RBP16.4■□□□□ 0.22
GTF2B-207ENST00000494819 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
GTF2B-207ENST00000494819 PZPP20742 1482 aa16.39■□□□□ 0.21
GTF2B-207ENST00000494819 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.38■□□□□ 0.21
GTF2B-207ENST00000494819 MBD5Q9P267 1494 aa16.38■□□□□ 0.21
GTF2B-207ENST00000494819 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
GTF2B-207ENST00000494819 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
GTF2B-207ENST00000494819 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
GTF2B-207ENST00000494819 DHX29Q7Z478 1369 aaKnown RBP16.36■□□□□ 0.21
GTF2B-207ENST00000494819 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
GTF2B-207ENST00000494819 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
GTF2B-207ENST00000494819 MED14O60244 1454 aa16.35■□□□□ 0.21
GTF2B-207ENST00000494819 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
GTF2B-207ENST00000494819 DEPDC5O75140 1603 aa16.34■□□□□ 0.21
GTF2B-207ENST00000494819 ANKLE2Q86XL3 938 aa16.33■□□□□ 0.2
GTF2B-207ENST00000494819 FAM135AQ9P2D6 1515 aa16.33■□□□□ 0.2
GTF2B-207ENST00000494819 UGGT1Q9NYU2 1555 aa16.33■□□□□ 0.2
GTF2B-207ENST00000494819 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
GTF2B-207ENST00000494819 LRRC7Q96NW7 1537 aa16.32■□□□□ 0.2
GTF2B-207ENST00000494819 STRCP1A6NGW2 1772 aa16.31■□□□□ 0.2
GTF2B-207ENST00000494819 NLRP1Q9C000 1473 aa16.31■□□□□ 0.2
GTF2B-207ENST00000494819 MIA2Q96PC5 1412 aa16.31■□□□□ 0.2
GTF2B-207ENST00000494819 KIF3BO15066 747 aa16.31■□□□□ 0.2
GTF2B-207ENST00000494819 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
GTF2B-207ENST00000494819 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
GTF2B-207ENST00000494819 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
GTF2B-207ENST00000494819 THEMISQ8N1K5 641 aaPredicted RBP16.29■□□□□ 0.2
GTF2B-207ENST00000494819 SYNMO15061 1565 aa16.29■□□□□ 0.2
GTF2B-207ENST00000494819 RGS17Q9UGC6 210 aaPredicted RBP16.28■□□□□ 0.2
GTF2B-207ENST00000494819 WASHC2CQ9Y4E1 1318 aa16.27■□□□□ 0.2
GTF2B-207ENST00000494819 EHBP1L1Q8N3D4 1523 aa16.27■□□□□ 0.2
GTF2B-207ENST00000494819 CCDC141Q6ZP82 1450 aa16.27■□□□□ 0.19
GTF2B-207ENST00000494819 CEP162Q5TB80 1403 aa16.24■□□□□ 0.19
GTF2B-207ENST00000494819 CAMSAP2Q08AD1 1489 aa16.23■□□□□ 0.19
GTF2B-207ENST00000494819 ZC3H13Q5T200 1668 aaKnown RBP16.23■□□□□ 0.19
GTF2B-207ENST00000494819 ABCC3O15438 1527 aa16.21■□□□□ 0.19
GTF2B-207ENST00000494819 ERVK-7P63135 1459 aa16.21■□□□□ 0.19
GTF2B-207ENST00000494819 NCOA2Q15596 1464 aa16.17■□□□□ 0.18
GTF2B-207ENST00000494819 SCAF11Q99590 1463 aaKnown RBP16.17■□□□□ 0.18
GTF2B-207ENST00000494819 MROH1Q8NDA8 1641 aa16.16■□□□□ 0.18
GTF2B-207ENST00000494819 POTEAQ6S8J7 498 aa16.16■□□□□ 0.18
GTF2B-207ENST00000494819 ARHGEF5Q12774 1597 aa16.16■□□□□ 0.18
GTF2B-207ENST00000494819 UBR1Q8IWV7 1749 aa16.16■□□□□ 0.18
GTF2B-207ENST00000494819 XIRP1Q702N8 1843 aaKnown RBP16.15■□□□□ 0.18
GTF2B-207ENST00000494819 LTKP29376 864 aa16.14■□□□□ 0.17
GTF2B-207ENST00000494819 HOXD11P31277 338 aaPredicted RBP16.14■□□□□ 0.17
GTF2B-207ENST00000494819 ARHGAP23Q9P227 1491 aa16.14■□□□□ 0.17
GTF2B-207ENST00000494819 RSPH4AQ5TD94 716 aa16.13■□□□□ 0.17
GTF2B-207ENST00000494819 SLIT1O75093 1534 aa16.13■□□□□ 0.17
GTF2B-207ENST00000494819 FAM135BQ49AJ0 1406 aa16.11■□□□□ 0.17
GTF2B-207ENST00000494819 EIF2AK4Q9P2K8 1649 aaKnown RBP16.11■□□□□ 0.17
GTF2B-207ENST00000494819 CEP152O94986 1710 aa16.11■□□□□ 0.17
GTF2B-207ENST00000494819 MAST1Q9Y2H9 1570 aa16.1■□□□□ 0.17
GTF2B-207ENST00000494819 SETD1AO15047 1707 aaKnown RBP16.09■□□□□ 0.17
GTF2B-207ENST00000494819 TSPY4P0CV99 314 aa16.09■□□□□ 0.17
GTF2B-207ENST00000494819 TSPY10P0CW01 314 aa16.09■□□□□ 0.17
GTF2B-207ENST00000494819 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
GTF2B-207ENST00000494819 TXNDC2Q86VQ3 553 aa16.08■□□□□ 0.16
GTF2B-207ENST00000494819 TMEM94Q12767 1356 aa16.07■□□□□ 0.16
GTF2B-207ENST00000494819 ROBO1Q9Y6N7 1651 aa16.07■□□□□ 0.16
GTF2B-207ENST00000494819 PIK3C2BO00750 1634 aa16.04■□□□□ 0.16
GTF2B-207ENST00000494819 ARHGAP31Q2M1Z3 1444 aa16.03■□□□□ 0.16
GTF2B-207ENST00000494819 PRDM15P57071 1507 aaPredicted RBP16.03■□□□□ 0.16
GTF2B-207ENST00000494819 TMEM2Q9UHN6 1383 aa16.02■□□□□ 0.16
GTF2B-207ENST00000494819 RBM33Q96EV2 1170 aaKnown RBP16.02■□□□□ 0.16
GTF2B-207ENST00000494819 EID1Q9Y6B2 187 aa16.01■□□□□ 0.15
GTF2B-207ENST00000494819 DUOX2Q9NRD8 1548 aa16■□□□□ 0.15
GTF2B-207ENST00000494819 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
GTF2B-207ENST00000494819 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
GTF2B-207ENST00000494819 NWD1Q149M9 1564 aa15.99■□□□□ 0.15
GTF2B-207ENST00000494819 TET3O43151 1660 aa15.99■□□□□ 0.15
GTF2B-207ENST00000494819 KCNA6P17658 529 aa15.98■□□□□ 0.15
GTF2B-207ENST00000494819 EFCAB6Q5THR3 1501 aa15.98■□□□□ 0.15
GTF2B-207ENST00000494819 SLC26A8Q96RN1 970 aa15.97■□□□□ 0.15
GTF2B-207ENST00000494819 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
GTF2B-207ENST00000494819 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
GTF2B-207ENST00000494819 KIF15Q9NS87 1388 aa15.96■□□□□ 0.15
GTF2B-207ENST00000494819 LRP6O75581 1613 aa15.95■□□□□ 0.14
GTF2B-207ENST00000494819 PHLPP1O60346 1717 aa15.95■□□□□ 0.14
GTF2B-207ENST00000494819 JCADQ9P266 1359 aa15.95■□□□□ 0.14
GTF2B-207ENST00000494819 ERBINQ96RT1 1412 aa15.94■□□□□ 0.14
GTF2B-207ENST00000494819 KDM5AP29375 1690 aaKnown RBP15.94■□□□□ 0.14
GTF2B-207ENST00000494819 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
GTF2B-207ENST00000494819 IDI1Q13907 227 aa15.93■□□□□ 0.14
GTF2B-207ENST00000494819 STAG3Q9UJ98 1225 aa15.93■□□□□ 0.14
GTF2B-207ENST00000494819 MYOM3Q5VTT5 1437 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms