RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 MBD5Q9P267 1494 aa9.89□□□□□ -0.83
EPHA3-203ENST00000494014 NCOA1Q15788 1441 aa9.88□□□□□ -0.83
EPHA3-203ENST00000494014 UBTFP17480 764 aaKnown RBP9.87□□□□□ -0.83
EPHA3-203ENST00000494014 LTBP4Q8N2S1 1624 aa9.87□□□□□ -0.83
EPHA3-203ENST00000494014 ARID3CA6NKF2 412 aa9.87□□□□□ -0.83
EPHA3-203ENST00000494014 A2MP01023 1474 aa9.87□□□□□ -0.83
EPHA3-203ENST00000494014 KDM5DQ9BY66 1539 aa9.86□□□□□ -0.83
EPHA3-203ENST00000494014 ANO8Q9HCE9 1232 aaPredicted RBP9.86□□□□□ -0.83
EPHA3-203ENST00000494014 CLTCQ00610 1675 aaKnown RBP9.86□□□□□ -0.83
EPHA3-203ENST00000494014 DMRT2Q9Y5R5 561 aa9.86□□□□□ -0.83
EPHA3-203ENST00000494014 VPS8Q8N3P4 1428 aa9.85□□□□□ -0.83
EPHA3-203ENST00000494014 ARID4BQ4LE39 1312 aaPredicted RBP9.85□□□□□ -0.83
EPHA3-203ENST00000494014 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
EPHA3-203ENST00000494014 DEPDC5O75140 1603 aa9.84□□□□□ -0.83
EPHA3-203ENST00000494014 POLR1AO95602 1720 aaPredicted RBP9.84□□□□□ -0.83
EPHA3-203ENST00000494014 PTPRKQ15262 1439 aa9.84□□□□□ -0.83
EPHA3-203ENST00000494014 CEP170BQ9Y4F5 1589 aaPredicted RBP9.84□□□□□ -0.83
EPHA3-203ENST00000494014 RSPH4AQ5TD94 716 aa9.84□□□□□ -0.83
EPHA3-203ENST00000494014 KDM5AP29375 1690 aaKnown RBP9.83□□□□□ -0.84
EPHA3-203ENST00000494014 CCDC141Q6ZP82 1450 aa9.83□□□□□ -0.84
EPHA3-203ENST00000494014 CCER2I3L3R5 266 aa9.83□□□□□ -0.84
EPHA3-203ENST00000494014 CROCC2H7BZ55 1655 aa9.83□□□□□ -0.84
EPHA3-203ENST00000494014 ITGAEP38570 1179 aa9.82□□□□□ -0.84
EPHA3-203ENST00000494014 CCNB3Q8WWL7 1395 aa9.82□□□□□ -0.84
EPHA3-203ENST00000494014 UBE2Q2Q8WVN8 375 aa9.81□□□□□ -0.84
EPHA3-203ENST00000494014 A2ML1A8K2U0 1454 aa9.81□□□□□ -0.84
EPHA3-203ENST00000494014 PZPP20742 1482 aa9.81□□□□□ -0.84
EPHA3-203ENST00000494014 SHANK2Q9UPX8 1470 aa9.81□□□□□ -0.84
EPHA3-203ENST00000494014 CAMSAP2Q08AD1 1489 aa9.81□□□□□ -0.84
EPHA3-203ENST00000494014 AFAP1Q8N556 730 aa9.81□□□□□ -0.84
EPHA3-203ENST00000494014 MIA2Q96PC5 1412 aa9.81□□□□□ -0.84
EPHA3-203ENST00000494014 DHX29Q7Z478 1369 aaKnown RBP9.8□□□□□ -0.84
EPHA3-203ENST00000494014 DNMT1P26358 1616 aaKnown RBP9.8□□□□□ -0.84
EPHA3-203ENST00000494014 CAMSAP1Q5T5Y3 1602 aa9.8□□□□□ -0.84
EPHA3-203ENST00000494014 NCOA2Q15596 1464 aa9.79□□□□□ -0.84
EPHA3-203ENST00000494014 SPATA31D1Q6ZQQ2 1576 aa9.79□□□□□ -0.84
EPHA3-203ENST00000494014 SPAG9O60271 1321 aaKnown RBP9.79□□□□□ -0.84
EPHA3-203ENST00000494014 MED14O60244 1454 aa9.78□□□□□ -0.84
EPHA3-203ENST00000494014 NLRP1Q9C000 1473 aa9.78□□□□□ -0.84
EPHA3-203ENST00000494014 MROH1Q8NDA8 1641 aa9.78□□□□□ -0.84
EPHA3-203ENST00000494014 MTUS2Q5JR59 1369 aa9.78□□□□□ -0.84
EPHA3-203ENST00000494014 CERKQ8TCT0 537 aa9.78□□□□□ -0.84
EPHA3-203ENST00000494014 LRRC9Q6ZRR7 1453 aa9.77□□□□□ -0.84
EPHA3-203ENST00000494014 ZMYM3Q14202 1370 aa9.77□□□□□ -0.84
EPHA3-203ENST00000494014 NEURL4Q96JN8 1562 aa9.77□□□□□ -0.85
EPHA3-203ENST00000494014 CPS1P31327 1500 aa9.77□□□□□ -0.85
EPHA3-203ENST00000494014 SALL2Q9Y467 1007 aaPredicted RBP9.76□□□□□ -0.85
EPHA3-203ENST00000494014 PRDM15P57071 1507 aaPredicted RBP9.76□□□□□ -0.85
EPHA3-203ENST00000494014 SYNMO15061 1565 aa9.76□□□□□ -0.85
EPHA3-203ENST00000494014 PKD2Q13563 968 aa9.76□□□□□ -0.85
EPHA3-203ENST00000494014 NOP58Q9Y2X3 529 aaKnown RBP9.76□□□□□ -0.85
EPHA3-203ENST00000494014 LMTK2Q8IWU2 1503 aa9.75□□□□□ -0.85
EPHA3-203ENST00000494014 ARHGAP31Q2M1Z3 1444 aa9.75□□□□□ -0.85
EPHA3-203ENST00000494014 DUOX2Q9NRD8 1548 aa9.74□□□□□ -0.85
EPHA3-203ENST00000494014 VWDEQ8N2E2 1590 aa9.74□□□□□ -0.85
EPHA3-203ENST00000494014 CFDP1Q9UEE9 299 aaPredicted RBP9.74□□□□□ -0.85
EPHA3-203ENST00000494014 ABCC3O15438 1527 aa9.73□□□□□ -0.85
EPHA3-203ENST00000494014 ERBINQ96RT1 1412 aa9.72□□□□□ -0.85
EPHA3-203ENST00000494014 ANP32CO43423 234 aa9.72□□□□□ -0.85
EPHA3-203ENST00000494014 RTL5Q5HYW3 569 aaPredicted RBP9.72□□□□□ -0.85
EPHA3-203ENST00000494014 RRBP1Q9P2E9 1410 aaKnown RBP9.72□□□□□ -0.85
EPHA3-203ENST00000494014 RANGAP1P46060 587 aaPredicted RBP9.72□□□□□ -0.85
EPHA3-203ENST00000494014 PPP1R15AO75807 674 aaPredicted RBP9.71□□□□□ -0.85
EPHA3-203ENST00000494014 TRIM52Q96A61 297 aa9.71□□□□□ -0.85
EPHA3-203ENST00000494014 PPP4R2Q9NY27 417 aa9.71□□□□□ -0.85
EPHA3-203ENST00000494014 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.85
EPHA3-203ENST00000494014 MYOM3Q5VTT5 1437 aa9.71□□□□□ -0.86
EPHA3-203ENST00000494014 SLIT1O75093 1534 aa9.7□□□□□ -0.86
EPHA3-203ENST00000494014 UBR1Q8IWV7 1749 aa9.7□□□□□ -0.86
EPHA3-203ENST00000494014 IQGAP1P46940 1657 aa9.7□□□□□ -0.86
EPHA3-203ENST00000494014 HSPA2P54652 639 aa9.7□□□□□ -0.86
EPHA3-203ENST00000494014 ADGRL2O95490 1459 aa9.69□□□□□ -0.86
EPHA3-203ENST00000494014 ARHGAP23Q9P227 1491 aa9.69□□□□□ -0.86
EPHA3-203ENST00000494014 HNRNPMP52272 730 aaKnown RBP eCLIP9.68□□□□□ -0.86
EPHA3-203ENST00000494014 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
EPHA3-203ENST00000494014 ERVK-7P63135 1459 aa9.68□□□□□ -0.86
EPHA3-203ENST00000494014 PTPN23Q9H3S7 1636 aa9.68□□□□□ -0.86
EPHA3-203ENST00000494014 NBR1Q14596 966 aa9.68□□□□□ -0.86
EPHA3-203ENST00000494014 ESF1Q9H501 851 aaKnown RBP9.68□□□□□ -0.86
EPHA3-203ENST00000494014 TIMELESSQ9UNS1 1208 aa9.68□□□□□ -0.86
EPHA3-203ENST00000494014 TNRQ92752 1358 aa9.68□□□□□ -0.86
EPHA3-203ENST00000494014 MLECQ14165 292 aa9.67□□□□□ -0.86
EPHA3-203ENST00000494014 CEBPAP49715 358 aaPredicted RBP9.67□□□□□ -0.86
EPHA3-203ENST00000494014 CEP152O94986 1710 aa9.67□□□□□ -0.86
EPHA3-203ENST00000494014 UGGT1Q9NYU2 1555 aa9.66□□□□□ -0.86
EPHA3-203ENST00000494014 CCDC136Q96JN2 1154 aa9.64□□□□□ -0.87
EPHA3-203ENST00000494014 ALKQ9UM73 1620 aa9.64□□□□□ -0.87
EPHA3-203ENST00000494014 RPRD2Q5VT52 1461 aaKnown RBP9.64□□□□□ -0.87
EPHA3-203ENST00000494014 NWD1Q149M9 1564 aa9.64□□□□□ -0.87
EPHA3-203ENST00000494014 ANP32AP39687 249 aaKnown RBP9.63□□□□□ -0.87
EPHA3-203ENST00000494014 UNC13BO14795 1591 aa9.63□□□□□ -0.87
EPHA3-203ENST00000494014 GCC2Q8IWJ2 1684 aa9.63□□□□□ -0.87
EPHA3-203ENST00000494014 C11orf95C9JLR9 678 aaPredicted RBP9.63□□□□□ -0.87
EPHA3-203ENST00000494014 IL27Q8NEV9 243 aa9.63□□□□□ -0.87
EPHA3-203ENST00000494014 IPO9Q96P70 1041 aaKnown RBP9.62□□□□□ -0.87
EPHA3-203ENST00000494014 STRCP1A6NGW2 1772 aa9.62□□□□□ -0.87
EPHA3-203ENST00000494014 EFCAB6Q5THR3 1501 aa9.62□□□□□ -0.87
EPHA3-203ENST00000494014 WASHC2AQ641Q2 1341 aa9.62□□□□□ -0.87
EPHA3-203ENST00000494014 ZNF644Q9H582 1327 aaPredicted RBP9.62□□□□□ -0.87
EPHA3-203ENST00000494014 PAK3O75914 559 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms