RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 PLEKHH2Q8IVE3 1493 aa9.44□□□□□ -0.9
A1CF-210ENST00000493415 CASKIN1Q8WXD9 1431 aa9.43□□□□□ -0.9
A1CF-210ENST00000493415 PPP4R3CPQ6ZMV5 832 aa9.43□□□□□ -0.9
A1CF-210ENST00000493415 IQGAP1P46940 1657 aa9.42□□□□□ -0.9
A1CF-210ENST00000493415 RNF17Q9BXT8 1623 aaKnown RBP9.42□□□□□ -0.9
A1CF-210ENST00000493415 TNRQ92752 1358 aa9.42□□□□□ -0.9
A1CF-210ENST00000493415 VWDEQ8N2E2 1590 aa9.41□□□□□ -0.9
A1CF-210ENST00000493415 GPATCH8Q9UKJ3 1502 aaKnown RBP9.41□□□□□ -0.9
A1CF-210ENST00000493415 FYCO1Q9BQS8 1478 aa9.41□□□□□ -0.9
A1CF-210ENST00000493415 CCNB3Q8WWL7 1395 aa9.41□□□□□ -0.9
A1CF-210ENST00000493415 CFDP1Q9UEE9 299 aaPredicted RBP9.41□□□□□ -0.9
A1CF-210ENST00000493415 SYNMO15061 1565 aa9.41□□□□□ -0.9
A1CF-210ENST00000493415 KDM5DQ9BY66 1539 aa9.41□□□□□ -0.9
A1CF-210ENST00000493415 NPHP4O75161 1426 aaPredicted RBP9.39□□□□□ -0.91
A1CF-210ENST00000493415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.39□□□□□ -0.91
A1CF-210ENST00000493415 UGGT1Q9NYU2 1555 aa9.39□□□□□ -0.91
A1CF-210ENST00000493415 ANKLE2Q86XL3 938 aa9.39□□□□□ -0.91
A1CF-210ENST00000493415 FAM135AQ9P2D6 1515 aa9.39□□□□□ -0.91
A1CF-210ENST00000493415 STRCP1A6NGW2 1772 aa9.39□□□□□ -0.91
A1CF-210ENST00000493415 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
A1CF-210ENST00000493415 DEPDC5O75140 1603 aa9.38□□□□□ -0.91
A1CF-210ENST00000493415 ALKQ9UM73 1620 aa9.38□□□□□ -0.91
A1CF-210ENST00000493415 PZPP20742 1482 aa9.38□□□□□ -0.91
A1CF-210ENST00000493415 KCNA4P22459 653 aa9.37□□□□□ -0.91
A1CF-210ENST00000493415 FBXO31Q5XUX0 539 aaPredicted RBP9.37□□□□□ -0.91
A1CF-210ENST00000493415 TIAM1Q13009 1591 aa9.37□□□□□ -0.91
A1CF-210ENST00000493415 MTUS2Q5JR59 1369 aa9.37□□□□□ -0.91
A1CF-210ENST00000493415 CFAP65Q6ZU64 1925 aaKnown RBP9.37□□□□□ -0.91
A1CF-210ENST00000493415 SETD1AO15047 1707 aaKnown RBP9.36□□□□□ -0.91
A1CF-210ENST00000493415 KIF3BO15066 747 aa9.36□□□□□ -0.91
A1CF-210ENST00000493415 NLRP1Q9C000 1473 aa9.35□□□□□ -0.91
A1CF-210ENST00000493415 THEMISQ8N1K5 641 aaPredicted RBP9.35□□□□□ -0.91
A1CF-210ENST00000493415 LRRC7Q96NW7 1537 aa9.35□□□□□ -0.91
A1CF-210ENST00000493415 WASHC2CQ9Y4E1 1318 aa9.34□□□□□ -0.91
A1CF-210ENST00000493415 EHBP1L1Q8N3D4 1523 aa9.34□□□□□ -0.91
A1CF-210ENST00000493415 MED14O60244 1454 aa9.34□□□□□ -0.91
A1CF-210ENST00000493415 ZC3H13Q5T200 1668 aaKnown RBP9.33□□□□□ -0.92
A1CF-210ENST00000493415 DHX29Q7Z478 1369 aaKnown RBP9.33□□□□□ -0.92
A1CF-210ENST00000493415 CEP152O94986 1710 aa9.33□□□□□ -0.92
A1CF-210ENST00000493415 CCDC141Q6ZP82 1450 aa9.33□□□□□ -0.92
A1CF-210ENST00000493415 ZNF644Q9H582 1327 aaPredicted RBP9.32□□□□□ -0.92
A1CF-210ENST00000493415 RTEL1-TNFRSF6BF6WH68 1400 aa9.32□□□□□ -0.92
A1CF-210ENST00000493415 MIA2Q96PC5 1412 aa9.32□□□□□ -0.92
A1CF-210ENST00000493415 XIRP1Q702N8 1843 aaKnown RBP9.32□□□□□ -0.92
A1CF-210ENST00000493415 UBR1Q8IWV7 1749 aa9.31□□□□□ -0.92
A1CF-210ENST00000493415 CAMSAP2Q08AD1 1489 aa9.3□□□□□ -0.92
A1CF-210ENST00000493415 MBD5Q9P267 1494 aa9.3□□□□□ -0.92
A1CF-210ENST00000493415 ROBO1Q9Y6N7 1651 aa9.29□□□□□ -0.92
A1CF-210ENST00000493415 ERVK-7P63135 1459 aa9.28□□□□□ -0.92
A1CF-210ENST00000493415 SCAF11Q99590 1463 aaKnown RBP9.28□□□□□ -0.92
A1CF-210ENST00000493415 ABCC3O15438 1527 aa9.28□□□□□ -0.92
A1CF-210ENST00000493415 RGS17Q9UGC6 210 aaPredicted RBP9.28□□□□□ -0.92
A1CF-210ENST00000493415 PHLPP1O60346 1717 aa9.27□□□□□ -0.93
A1CF-210ENST00000493415 POTEAQ6S8J7 498 aa9.26□□□□□ -0.93
A1CF-210ENST00000493415 EIF2AK4Q9P2K8 1649 aaKnown RBP9.26□□□□□ -0.93
A1CF-210ENST00000493415 CEP162Q5TB80 1403 aa9.25□□□□□ -0.93
A1CF-210ENST00000493415 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
A1CF-210ENST00000493415 TSPY4P0CV99 314 aa9.24□□□□□ -0.93
A1CF-210ENST00000493415 TSPY10P0CW01 314 aa9.24□□□□□ -0.93
A1CF-210ENST00000493415 EID1Q9Y6B2 187 aa9.24□□□□□ -0.93
A1CF-210ENST00000493415 PIK3C2BO00750 1634 aa9.23□□□□□ -0.93
A1CF-210ENST00000493415 NCOA2Q15596 1464 aa9.23□□□□□ -0.93
A1CF-210ENST00000493415 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
A1CF-210ENST00000493415 TXNDC2Q86VQ3 553 aa9.23□□□□□ -0.93
A1CF-210ENST00000493415 STAG3Q9UJ98 1225 aa9.23□□□□□ -0.93
A1CF-210ENST00000493415 FAM135BQ49AJ0 1406 aa9.22□□□□□ -0.93
A1CF-210ENST00000493415 SLIT1O75093 1534 aa9.22□□□□□ -0.93
A1CF-210ENST00000493415 NCBP3Q53F19 620 aaKnown RBP9.22□□□□□ -0.93
A1CF-210ENST00000493415 MROH1Q8NDA8 1641 aa9.22□□□□□ -0.93
A1CF-210ENST00000493415 MAST1Q9Y2H9 1570 aa9.21□□□□□ -0.93
A1CF-210ENST00000493415 RSPH4AQ5TD94 716 aa9.21□□□□□ -0.94
A1CF-210ENST00000493415 MEX3CQ5U5Q3 659 aaKnown RBP9.21□□□□□ -0.94
A1CF-210ENST00000493415 TMEM94Q12767 1356 aa9.21□□□□□ -0.94
A1CF-210ENST00000493415 ARHGAP23Q9P227 1491 aa9.21□□□□□ -0.94
A1CF-210ENST00000493415 LTKP29376 864 aa9.2□□□□□ -0.94
A1CF-210ENST00000493415 TRIM52Q96A61 297 aa9.2□□□□□ -0.94
A1CF-210ENST00000493415 RBM33Q96EV2 1170 aaKnown RBP9.2□□□□□ -0.94
A1CF-210ENST00000493415 BCANQ96GW7 911 aa9.2□□□□□ -0.94
A1CF-210ENST00000493415 MAP3K1Q13233 1512 aa9.2□□□□□ -0.94
A1CF-210ENST00000493415 PROSER2Q86WR7 435 aaPredicted RBP9.19□□□□□ -0.94
A1CF-210ENST00000493415 MSH6P52701 1360 aa9.19□□□□□ -0.94
A1CF-210ENST00000493415 EFCAB6Q5THR3 1501 aa9.18□□□□□ -0.94
A1CF-210ENST00000493415 JCADQ9P266 1359 aa9.18□□□□□ -0.94
A1CF-210ENST00000493415 NWD1Q149M9 1564 aa9.17□□□□□ -0.94
A1CF-210ENST00000493415 PRDM15P57071 1507 aaPredicted RBP9.17□□□□□ -0.94
A1CF-210ENST00000493415 DUOX2Q9NRD8 1548 aa9.17□□□□□ -0.94
A1CF-210ENST00000493415 NKTRP30414 1462 aaKnown RBP9.17□□□□□ -0.94
A1CF-210ENST00000493415 CROCC2H7BZ55 1655 aa9.16□□□□□ -0.94
A1CF-210ENST00000493415 KDM5AP29375 1690 aaKnown RBP9.16□□□□□ -0.94
A1CF-210ENST00000493415 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
A1CF-210ENST00000493415 TMEM2Q9UHN6 1383 aa9.16□□□□□ -0.94
A1CF-210ENST00000493415 SLC26A8Q96RN1 970 aa9.16□□□□□ -0.94
A1CF-210ENST00000493415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.16□□□□□ -0.941e-6■■□□□ 14.2
A1CF-210ENST00000493415 MYO5BQ9ULV0 1848 aa9.15□□□□□ -0.94
A1CF-210ENST00000493415 KCNA6P17658 529 aa9.15□□□□□ -0.94
A1CF-210ENST00000493415 C14orf37Q86TY3 774 aa9.15□□□□□ -0.94
A1CF-210ENST00000493415 ADGRB3O60242 1522 aa9.15□□□□□ -0.95
A1CF-210ENST00000493415 KANK1Q14678 1352 aa9.14□□□□□ -0.95
A1CF-210ENST00000493415 SHPRHQ149N8 1683 aa9.14□□□□□ -0.95
A1CF-210ENST00000493415 LRP6O75581 1613 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms