RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 INSRP06213 1382 aa8.37□□□□□ -1.07
CCDC6-202ENST00000491922 E9PCH4 1651 aa8.37□□□□□ -1.07
CCDC6-202ENST00000491922 CNGB1Q14028 1251 aaPredicted RBP8.37□□□□□ -1.07
CCDC6-202ENST00000491922 SAMD9Q5K651 1589 aa8.37□□□□□ -1.07
CCDC6-202ENST00000491922 POGKQ9P215 609 aa8.36□□□□□ -1.07
CCDC6-202ENST00000491922 PLEKHH2Q8IVE3 1493 aa8.36□□□□□ -1.07
CCDC6-202ENST00000491922 POLR3GLQ9BT43 218 aa8.36□□□□□ -1.07
CCDC6-202ENST00000491922 SKAP1Q86WV1 359 aa8.35□□□□□ -1.07
CCDC6-202ENST00000491922 CHIC2Q9UKJ5 165 aa8.35□□□□□ -1.07
CCDC6-202ENST00000491922 ROCK1Q13464 1354 aa8.34□□□□□ -1.07
CCDC6-202ENST00000491922 PLIN1O60240 522 aa8.34□□□□□ -1.07
CCDC6-202ENST00000491922 TRHP20396 242 aaPredicted RBP8.34□□□□□ -1.07
CCDC6-202ENST00000491922 BECN1Q14457 450 aa8.34□□□□□ -1.07
CCDC6-202ENST00000491922 NLRP13Q86W25 1043 aa8.33□□□□□ -1.08
CCDC6-202ENST00000491922 BLMP54132 1417 aaPredicted RBP8.33□□□□□ -1.08
CCDC6-202ENST00000491922 GOLGA6L3A6NEY3 463 aa8.33□□□□□ -1.08
CCDC6-202ENST00000491922 RALGAPBQ86X10 1494 aa8.32□□□□□ -1.08
CCDC6-202ENST00000491922 CDCA7LQ96GN5 454 aa8.32□□□□□ -1.08
CCDC6-202ENST00000491922 MAGI3Q5TCQ9 1506 aa8.32□□□□□ -1.08
CCDC6-202ENST00000491922 FSD2A1L4K1 749 aa8.32□□□□□ -1.08
CCDC6-202ENST00000491922 CENPJQ9HC77 1338 aaPredicted RBP8.31□□□□□ -1.08
CCDC6-202ENST00000491922 PARD3Q8TEW0 1356 aa8.31□□□□□ -1.08
CCDC6-202ENST00000491922 XRCC6P12956 609 aaKnown RBP eCLIP8.31□□□□□ -1.08
CCDC6-202ENST00000491922 UHRF1BP1Q6BDS2 1440 aa8.31□□□□□ -1.08
CCDC6-202ENST00000491922 SLC4A1APQ9BWU0 796 aaKnown RBP8.31□□□□□ -1.08
CCDC6-202ENST00000491922 TPM2P07951 284 aa8.3□□□□□ -1.08
CCDC6-202ENST00000491922 ILDR1Q86SU0 546 aaPredicted RBP8.3□□□□□ -1.08
CCDC6-202ENST00000491922 DNMT1P26358 1616 aaKnown RBP8.3□□□□□ -1.08
CCDC6-202ENST00000491922 PDE4CQ08493 712 aa8.3□□□□□ -1.08
CCDC6-202ENST00000491922 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.3□□□□□ -1.08
CCDC6-202ENST00000491922 ABCA10Q8WWZ4 1543 aa8.29□□□□□ -1.08
CCDC6-202ENST00000491922 PDIA4P13667 645 aaKnown RBP8.29□□□□□ -1.08
CCDC6-202ENST00000491922 C20orf194Q5TEA3 1177 aa8.29□□□□□ -1.08
CCDC6-202ENST00000491922 DAPK1P53355 1430 aa8.28□□□□□ -1.08
CCDC6-202ENST00000491922 RGS3P49796 1198 aa8.28□□□□□ -1.08
CCDC6-202ENST00000491922 PDCL3Q9H2J4 239 aa8.28□□□□□ -1.08
CCDC6-202ENST00000491922 ANTXR1Q9H6X2 564 aa8.28□□□□□ -1.08
CCDC6-202ENST00000491922 PZPP20742 1482 aa8.28□□□□□ -1.08
CCDC6-202ENST00000491922 USP19O94966 1318 aa8.28□□□□□ -1.08
CCDC6-202ENST00000491922 MRE11P49959 708 aa8.28□□□□□ -1.08
CCDC6-202ENST00000491922 ARHGEF12Q9NZN5 1544 aa8.28□□□□□ -1.08
CCDC6-202ENST00000491922 GAPVD1Q14C86 1478 aa8.28□□□□□ -1.08
CCDC6-202ENST00000491922 EIF3AQ14152 1382 aaKnown RBP8.27□□□□□ -1.08
CCDC6-202ENST00000491922 CADPSQ9ULU8 1353 aa8.27□□□□□ -1.08
CCDC6-202ENST00000491922 ISY1Q9ULR0 285 aaKnown RBP8.27□□□□□ -1.09
CCDC6-202ENST00000491922 KIAA1107Q9UPP5 1409 aa8.27□□□□□ -1.09
CCDC6-202ENST00000491922 CALD1Q05682 793 aaKnown RBP8.27□□□□□ -1.09
CCDC6-202ENST00000491922 NCBP3Q53F19 620 aaKnown RBP8.27□□□□□ -1.09
CCDC6-202ENST00000491922 ESPNB1AK53 854 aa8.26□□□□□ -1.09
CCDC6-202ENST00000491922 ZNF326Q5BKZ1 582 aaKnown RBP8.26□□□□□ -1.09
CCDC6-202ENST00000491922 SLKQ9H2G2 1235 aaPredicted RBP8.26□□□□□ -1.09
CCDC6-202ENST00000491922 FGD1P98174 961 aa8.26□□□□□ -1.09
CCDC6-202ENST00000491922 CYB5RLQ6IPT4 315 aa8.26□□□□□ -1.09
CCDC6-202ENST00000491922 CARD11Q9BXL7 1154 aa8.26□□□□□ -1.09
CCDC6-202ENST00000491922 NLRP1Q9C000 1473 aa8.25□□□□□ -1.09
CCDC6-202ENST00000491922 MAPK8IP3Q9UPT6 1336 aa8.25□□□□□ -1.09
CCDC6-202ENST00000491922 PANK2Q9BZ23 570 aa8.25□□□□□ -1.09
CCDC6-202ENST00000491922 ADGBQ8N7X0 1667 aa8.25□□□□□ -1.09
CCDC6-202ENST00000491922 ABCC5O15440 1437 aa8.25□□□□□ -1.09
CCDC6-202ENST00000491922 MYH16Q9H6N6 1097 aa8.25□□□□□ -1.09
CCDC6-202ENST00000491922 ZNF608Q9ULD9 1512 aaPredicted RBP8.24□□□□□ -1.09
CCDC6-202ENST00000491922 MCM4P33991 863 aa8.24□□□□□ -1.09
CCDC6-202ENST00000491922 DNMBPQ6XZF7 1577 aa8.24□□□□□ -1.09
CCDC6-202ENST00000491922 EPRSP07814 1512 aaKnown RBP8.24□□□□□ -1.09
CCDC6-202ENST00000491922 ZMYM3Q14202 1370 aa8.23□□□□□ -1.09
CCDC6-202ENST00000491922 ST20-MTHFSA0A0A6YYL1 179 aa8.23□□□□□ -1.09
CCDC6-202ENST00000491922 ARXQ96QS3 562 aa8.23□□□□□ -1.09
CCDC6-202ENST00000491922 UPF2Q9HAU5 1272 aaKnown RBP8.23□□□□□ -1.09
CCDC6-202ENST00000491922 CCDC144AA2RUR9 1427 aa8.23□□□□□ -1.09
CCDC6-202ENST00000491922 CLASP1Q7Z460 1538 aa8.23□□□□□ -1.09
CCDC6-202ENST00000491922 DUSP27Q5VZP5 1158 aa8.22□□□□□ -1.09
CCDC6-202ENST00000491922 TRIM44Q96DX7 344 aaPredicted RBP8.22□□□□□ -1.09
CCDC6-202ENST00000491922 GRPEL1Q9HAV7 217 aa8.22□□□□□ -1.09
CCDC6-202ENST00000491922 TRAK2O60296 914 aa8.21□□□□□ -1.09
CCDC6-202ENST00000491922 AAMPQ13685 434 aa8.21□□□□□ -1.09
CCDC6-202ENST00000491922 KLHL34Q8N239 644 aa8.21□□□□□ -1.09
CCDC6-202ENST00000491922 RAD54L2Q9Y4B4 1467 aa8.21□□□□□ -1.09
CCDC6-202ENST00000491922 PER1O15534 1290 aaPredicted RBP8.21□□□□□ -1.1
CCDC6-202ENST00000491922 MAP7D2Q96T17 732 aa8.21□□□□□ -1.1
CCDC6-202ENST00000491922 TBC1D2Q9BYX2 928 aa8.21□□□□□ -1.1
CCDC6-202ENST00000491922 GZF1Q9H116 711 aaPredicted RBP8.21□□□□□ -1.1
CCDC6-202ENST00000491922 ERBB4Q15303 1308 aa8.21□□□□□ -1.1
CCDC6-202ENST00000491922 POLA1P09884 1462 aaPredicted RBP8.2□□□□□ -1.1
CCDC6-202ENST00000491922 DDX11L8A8MPP1 907 aa8.2□□□□□ -1.1
CCDC6-202ENST00000491922 SEC24BO95487 1268 aa8.2□□□□□ -1.1
CCDC6-202ENST00000491922 TBC1D32Q96NH3 1257 aa8.2□□□□□ -1.1
CCDC6-202ENST00000491922 CHMP5Q9NZZ3 219 aa8.2□□□□□ -1.1
CCDC6-202ENST00000491922 PRDM4Q9UKN5 801 aa8.2□□□□□ -1.1
CCDC6-202ENST00000491922 TERF1P54274 439 aa8.2□□□□□ -1.1
CCDC6-202ENST00000491922 GOLGA2Q08379 1002 aa8.2□□□□□ -1.1
CCDC6-202ENST00000491922 ZNF521Q96K83 1311 aa8.2□□□□□ -1.1
CCDC6-202ENST00000491922 NINLQ9Y2I6 1382 aa8.2□□□□□ -1.1
CCDC6-202ENST00000491922 CEP170Q5SW79 1584 aa8.19□□□□□ -1.1
CCDC6-202ENST00000491922 A0A0U1RQG5 324 aaPredicted RBP8.19□□□□□ -1.1
CCDC6-202ENST00000491922 KIAA0586Q9BVV6 1533 aa8.19□□□□□ -1.1
CCDC6-202ENST00000491922 CGNL1Q0VF96 1302 aa8.19□□□□□ -1.1
CCDC6-202ENST00000491922 PLEKHH1Q9ULM0 1364 aa8.19□□□□□ -1.1
CCDC6-202ENST00000491922 CDK13Q14004 1512 aaKnown RBP8.19□□□□□ -1.1
CCDC6-202ENST00000491922 PKD2Q13563 968 aa8.18□□□□□ -1.1
CCDC6-202ENST00000491922 KIAA1211Q6ZU35 1233 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms