RNA–Protein interactions for RNA: ENST00000490456.6

SKAP2-207, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-207ENST00000490456 CDK11AQ9UQ88 783 aaPredicted RBP14.16□□□□□ -0.14
SKAP2-207ENST00000490456 CLIP1P30622 1438 aa14.15□□□□□ -0.14
SKAP2-207ENST00000490456 NPATQ14207 1427 aa14.15□□□□□ -0.14
SKAP2-207ENST00000490456 CDC42BPBQ9Y5S2 1711 aa14.15□□□□□ -0.14
SKAP2-207ENST00000490456 ZNF142P52746 1687 aaPredicted RBP14.15□□□□□ -0.14
SKAP2-207ENST00000490456 ITSN2Q9NZM3 1697 aa14.14□□□□□ -0.15
SKAP2-207ENST00000490456 PRKAR2AP13861 404 aaKnown RBP14.14□□□□□ -0.15
SKAP2-207ENST00000490456 KIDINS220Q9ULH0 1771 aa14.13□□□□□ -0.15
SKAP2-207ENST00000490456 TROQ12816 1431 aaPredicted RBP14.13□□□□□ -0.15
SKAP2-207ENST00000490456 CEP162Q5TB80 1403 aa14.13□□□□□ -0.15
SKAP2-207ENST00000490456 FMN1Q68DA7 1419 aa14.13□□□□□ -0.15
SKAP2-207ENST00000490456 MED1Q15648 1581 aaPredicted RBP14.13□□□□□ -0.15
SKAP2-207ENST00000490456 PLA2R1Q13018 1463 aa14.12□□□□□ -0.15
SKAP2-207ENST00000490456 PREX2Q70Z35 1606 aa14.12□□□□□ -0.15
SKAP2-207ENST00000490456 ABCC1P33527 1531 aa14.12□□□□□ -0.15
SKAP2-207ENST00000490456 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
SKAP2-207ENST00000490456 ZNF335Q9H4Z2 1342 aaPredicted RBP14.12□□□□□ -0.15
SKAP2-207ENST00000490456 MYO3AQ8NEV4 1616 aa14.12□□□□□ -0.15
SKAP2-207ENST00000490456 PKD2Q13563 968 aa14.09□□□□□ -0.15
SKAP2-207ENST00000490456 TCOF1Q13428 1488 aaKnown RBP14.08□□□□□ -0.16
SKAP2-207ENST00000490456 ATP1B4Q9UN42 357 aaPredicted RBP14.08□□□□□ -0.16
SKAP2-207ENST00000490456 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
SKAP2-207ENST00000490456 CEP170BQ9Y4F5 1589 aaPredicted RBP14.08□□□□□ -0.16
SKAP2-207ENST00000490456 LRRIQ1Q96JM4 1722 aa14.07□□□□□ -0.16
SKAP2-207ENST00000490456 EVX2Q03828 476 aa14.07□□□□□ -0.16
SKAP2-207ENST00000490456 CLTCQ00610 1675 aaKnown RBP14.07□□□□□ -0.16
SKAP2-207ENST00000490456 ZMYM3Q14202 1370 aa14.06□□□□□ -0.16
SKAP2-207ENST00000490456 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
SKAP2-207ENST00000490456 POLR1AO95602 1720 aaPredicted RBP14.04□□□□□ -0.16
SKAP2-207ENST00000490456 SAMD9LQ8IVG5 1584 aa14.03□□□□□ -0.16
SKAP2-207ENST00000490456 CPS1P31327 1500 aa14.02□□□□□ -0.16
SKAP2-207ENST00000490456 HSPA1LP34931 641 aa14.02□□□□□ -0.17
SKAP2-207ENST00000490456 TOM1O60784 492 aa14.01□□□□□ -0.17
SKAP2-207ENST00000490456 SSUH2Q9Y2M2 353 aa14.01□□□□□ -0.17
SKAP2-207ENST00000490456 PLXNC1O60486 1568 aa14□□□□□ -0.17
SKAP2-207ENST00000490456 PTPRKQ15262 1439 aa14□□□□□ -0.17
SKAP2-207ENST00000490456 CASKIN1Q8WXD9 1431 aa13.99□□□□□ -0.17
SKAP2-207ENST00000490456 CCDC18Q5T9S5 1454 aa13.99□□□□□ -0.17
SKAP2-207ENST00000490456 DNMT1P26358 1616 aaKnown RBP13.98□□□□□ -0.17
SKAP2-207ENST00000490456 PIP4K2BP78356 416 aa13.98□□□□□ -0.17
SKAP2-207ENST00000490456 MKRN4PQ13434 485 aaPredicted RBP13.98□□□□□ -0.17
SKAP2-207ENST00000490456 ATP7AQ04656 1500 aa13.98□□□□□ -0.17
SKAP2-207ENST00000490456 A2ML1A8K2U0 1454 aa13.98□□□□□ -0.17
SKAP2-207ENST00000490456 INO80Q9ULG1 1556 aaPredicted RBP13.97□□□□□ -0.17
SKAP2-207ENST00000490456 SYCP2Q9BX26 1530 aa13.97□□□□□ -0.17
SKAP2-207ENST00000490456 SPAG9O60271 1321 aaKnown RBP13.96□□□□□ -0.17
SKAP2-207ENST00000490456 SHANK2Q9UPX8 1470 aa13.96□□□□□ -0.17
SKAP2-207ENST00000490456 C19orf67A6NJJ6 358 aa13.96□□□□□ -0.17
SKAP2-207ENST00000490456 ADGBQ8N7X0 1667 aa13.95□□□□□ -0.18
SKAP2-207ENST00000490456 A2MP01023 1474 aa13.95□□□□□ -0.18
SKAP2-207ENST00000490456 FYCO1Q9BQS8 1478 aa13.95□□□□□ -0.18
SKAP2-207ENST00000490456 NEURL4Q96JN8 1562 aa13.95□□□□□ -0.18
SKAP2-207ENST00000490456 VPS8Q8N3P4 1428 aa13.94□□□□□ -0.18
SKAP2-207ENST00000490456 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
SKAP2-207ENST00000490456 PLEKHH2Q8IVE3 1493 aa13.92□□□□□ -0.18
SKAP2-207ENST00000490456 KIAA1107Q9UPP5 1409 aa13.9□□□□□ -0.18
SKAP2-207ENST00000490456 ALKQ9UM73 1620 aa13.9□□□□□ -0.18
SKAP2-207ENST00000490456 GGT6Q6P531 493 aa13.9□□□□□ -0.18
SKAP2-207ENST00000490456 ZNF777Q9ULD5 760 aaPredicted RBP13.9□□□□□ -0.18
SKAP2-207ENST00000490456 VWDEQ8N2E2 1590 aa13.9□□□□□ -0.18
SKAP2-207ENST00000490456 DEPDC5O75140 1603 aa13.89□□□□□ -0.19
SKAP2-207ENST00000490456 RNF17Q9BXT8 1623 aaKnown RBP13.88□□□□□ -0.19
SKAP2-207ENST00000490456 FAM135AQ9P2D6 1515 aa13.88□□□□□ -0.19
SKAP2-207ENST00000490456 GPATCH8Q9UKJ3 1502 aaKnown RBP13.88□□□□□ -0.19
SKAP2-207ENST00000490456 HNRNPMP52272 730 aaKnown RBP eCLIP13.87□□□□□ -0.19
SKAP2-207ENST00000490456 SYNMO15061 1565 aa13.87□□□□□ -0.19
SKAP2-207ENST00000490456 TNRQ92752 1358 aa13.86□□□□□ -0.19
SKAP2-207ENST00000490456 GABBR2O75899 941 aa13.86□□□□□ -0.19
SKAP2-207ENST00000490456 MED14O60244 1454 aa13.86□□□□□ -0.19
SKAP2-207ENST00000490456 IQGAP1P46940 1657 aa13.85□□□□□ -0.19
SKAP2-207ENST00000490456 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
SKAP2-207ENST00000490456 ANKLE2Q86XL3 938 aa13.85□□□□□ -0.19
SKAP2-207ENST00000490456 PZPP20742 1482 aa13.84□□□□□ -0.19
SKAP2-207ENST00000490456 KDM5DQ9BY66 1539 aa13.84□□□□□ -0.19
SKAP2-207ENST00000490456 NPHP4O75161 1426 aaPredicted RBP13.83□□□□□ -0.2
SKAP2-207ENST00000490456 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.2
SKAP2-207ENST00000490456 UGGT1Q9NYU2 1555 aa13.83□□□□□ -0.2
SKAP2-207ENST00000490456 MTUS2Q5JR59 1369 aa13.83□□□□□ -0.2
SKAP2-207ENST00000490456 NLRP1Q9C000 1473 aa13.82□□□□□ -0.2
SKAP2-207ENST00000490456 THEMISQ8N1K5 641 aaPredicted RBP13.82□□□□□ -0.2
SKAP2-207ENST00000490456 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.82□□□□□ -0.2
SKAP2-207ENST00000490456 CFDP1Q9UEE9 299 aaPredicted RBP13.81□□□□□ -0.2
SKAP2-207ENST00000490456 RTEL1-TNFRSF6BF6WH68 1400 aa13.81□□□□□ -0.2
SKAP2-207ENST00000490456 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
SKAP2-207ENST00000490456 CCNB3Q8WWL7 1395 aa13.8□□□□□ -0.2
SKAP2-207ENST00000490456 DHX29Q7Z478 1369 aaKnown RBP13.79□□□□□ -0.2
SKAP2-207ENST00000490456 FBXO31Q5XUX0 539 aaPredicted RBP13.78□□□□□ -0.2
SKAP2-207ENST00000490456 MIA2Q96PC5 1412 aa13.78□□□□□ -0.2
SKAP2-207ENST00000490456 TIAM1Q13009 1591 aa13.77□□□□□ -0.21
SKAP2-207ENST00000490456 RGS17Q9UGC6 210 aaPredicted RBP13.77□□□□□ -0.21
SKAP2-207ENST00000490456 ZC3H13Q5T200 1668 aaKnown RBP13.76□□□□□ -0.21
SKAP2-207ENST00000490456 KANK4Q5T7N3 995 aaPredicted RBP13.76□□□□□ -0.21
SKAP2-207ENST00000490456 LHX8Q68G74 356 aa13.76□□□□□ -0.21
SKAP2-207ENST00000490456 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
SKAP2-207ENST00000490456 EHBP1L1Q8N3D4 1523 aa13.75□□□□□ -0.21
SKAP2-207ENST00000490456 MBD5Q9P267 1494 aa13.75□□□□□ -0.21
SKAP2-207ENST00000490456 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
SKAP2-207ENST00000490456 WASHC2CQ9Y4E1 1318 aa13.74□□□□□ -0.21
SKAP2-207ENST00000490456 KIF3BO15066 747 aa13.74□□□□□ -0.21
SKAP2-207ENST00000490456 XIRP1Q702N8 1843 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms