RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 ABCC5O15440 1437 aa30.75■■■□□ 2.51
SMC4-222ENST00000490207 DAPK1P53355 1430 aa30.73■■■□□ 2.51
SMC4-222ENST00000490207 MYO3AQ8NEV4 1616 aa30.73■■■□□ 2.51
SMC4-222ENST00000490207 DUOX2Q9NRD8 1548 aa30.72■■■□□ 2.51
SMC4-222ENST00000490207 PTPRKQ15262 1439 aa30.7■■■□□ 2.5
SMC4-222ENST00000490207 ZNF142P52746 1687 aaPredicted RBP30.69■■■□□ 2.5
SMC4-222ENST00000490207 STRCQ7RTU9 1775 aa30.68■■■□□ 2.5
SMC4-222ENST00000490207 ZC3H13Q5T200 1668 aaKnown RBP30.68■■■□□ 2.5
SMC4-222ENST00000490207 MROH1Q8NDA8 1641 aa30.65■■■□□ 2.5
SMC4-222ENST00000490207 KIF15Q9NS87 1388 aa30.65■■■□□ 2.5
SMC4-222ENST00000490207 PZPP20742 1482 aa30.62■■■□□ 2.49
SMC4-222ENST00000490207 CEP170BQ9Y4F5 1589 aaPredicted RBP30.62■■■□□ 2.49
SMC4-222ENST00000490207 ERBINQ96RT1 1412 aa30.61■■■□□ 2.49
SMC4-222ENST00000490207 ABCC3O15438 1527 aa30.6■■■□□ 2.49
SMC4-222ENST00000490207 CEP152O94986 1710 aa30.6■■■□□ 2.49
SMC4-222ENST00000490207 WASHC2CQ9Y4E1 1318 aa30.6■■■□□ 2.49
SMC4-222ENST00000490207 CAMSAP1Q5T5Y3 1602 aa30.57■■■□□ 2.48
SMC4-222ENST00000490207 FAM50AQ14320 339 aaKnown RBP30.56■■■□□ 2.48
SMC4-222ENST00000490207 PRDM15P57071 1507 aaPredicted RBP30.56■■■□□ 2.48
SMC4-222ENST00000490207 ANKRD30AQ9BXX3 1397 aa30.55■■■□□ 2.48
SMC4-222ENST00000490207 RRP7BPQ9NSQ0 103 aa30.55■■■□□ 2.48
SMC4-222ENST00000490207 NCOA1Q15788 1441 aa30.55■■■□□ 2.48
SMC4-222ENST00000490207 DEPDC5O75140 1603 aa30.55■■■□□ 2.48
SMC4-222ENST00000490207 ADGRL2O95490 1459 aa30.54■■■□□ 2.48
SMC4-222ENST00000490207 CHIC2Q9UKJ5 165 aa30.52■■■□□ 2.48
SMC4-222ENST00000490207 TNRQ92752 1358 aa30.51■■■□□ 2.47
SMC4-222ENST00000490207 A2ML1A8K2U0 1454 aa30.5■■■□□ 2.47
SMC4-222ENST00000490207 DMRT2Q9Y5R5 561 aa30.48■■■□□ 2.47
SMC4-222ENST00000490207 FBXO31Q5XUX0 539 aaPredicted RBP30.47■■■□□ 2.47
SMC4-222ENST00000490207 PLA2R1Q13018 1463 aa30.46■■■□□ 2.47
SMC4-222ENST00000490207 ILDR1Q86SU0 546 aaPredicted RBP30.46■■■□□ 2.47
SMC4-222ENST00000490207 PTPRTO14522 1441 aa30.46■■■□□ 2.47
SMC4-222ENST00000490207 SPATA31D1Q6ZQQ2 1576 aa30.45■■■□□ 2.47
SMC4-222ENST00000490207 PPARGC1BQ86YN6 1023 aaKnown RBP30.43■■■□□ 2.46
SMC4-222ENST00000490207 ERVK-7P63135 1459 aa30.41■■■□□ 2.46
SMC4-222ENST00000490207 NLRP1Q9C000 1473 aa30.41■■■□□ 2.46
SMC4-222ENST00000490207 CFAP65Q6ZU64 1925 aaKnown RBP30.39■■■□□ 2.46
SMC4-222ENST00000490207 POLR1AO95602 1720 aaPredicted RBP30.38■■■□□ 2.45
SMC4-222ENST00000490207 KANK1Q14678 1352 aa30.38■■■□□ 2.45
SMC4-222ENST00000490207 VWDEQ8N2E2 1590 aa30.37■■■□□ 2.45
SMC4-222ENST00000490207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.36■■■□□ 2.451e-7■■■■□ 24.4
SMC4-222ENST00000490207 UGGT1Q9NYU2 1555 aa30.34■■■□□ 2.45
SMC4-222ENST00000490207 LMTK2Q8IWU2 1503 aa30.34■■■□□ 2.45
SMC4-222ENST00000490207 ARHGAP31Q2M1Z3 1444 aa30.34■■■□□ 2.45
SMC4-222ENST00000490207 ANKRD50Q9ULJ7 1429 aa30.34■■■□□ 2.45
SMC4-222ENST00000490207 NCKAP5LQ9HCH0 1330 aa30.33■■■□□ 2.45
SMC4-222ENST00000490207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.32■■■□□ 2.443e-6■□□□□ 10.4
SMC4-222ENST00000490207 PKD2Q13563 968 aa30.32■■■□□ 2.44
SMC4-222ENST00000490207 FBXO41Q8TF61 875 aa30.3■■■□□ 2.44
SMC4-222ENST00000490207 ROCK1Q13464 1354 aa30.29■■■□□ 2.44
SMC4-222ENST00000490207 EFCAB6Q5THR3 1501 aa30.28■■■□□ 2.44
SMC4-222ENST00000490207 UNC13BO14795 1591 aa30.28■■■□□ 2.44
SMC4-222ENST00000490207 CERKQ8TCT0 537 aa30.27■■■□□ 2.44
SMC4-222ENST00000490207 NEURL4Q96JN8 1562 aa30.27■■■□□ 2.44
SMC4-222ENST00000490207 UBR1Q8IWV7 1749 aa30.26■■■□□ 2.43
SMC4-222ENST00000490207 RRBP1Q9P2E9 1410 aaKnown RBP30.24■■■□□ 2.43
SMC4-222ENST00000490207 LTBP4Q8N2S1 1624 aa30.24■■■□□ 2.43
SMC4-222ENST00000490207 ITGAEP38570 1179 aa30.22■■■□□ 2.43
SMC4-222ENST00000490207 THEMISQ8N1K5 641 aaPredicted RBP30.22■■■□□ 2.43
SMC4-222ENST00000490207 TET3O43151 1660 aa30.21■■■□□ 2.43
SMC4-222ENST00000490207 GCC2Q8IWJ2 1684 aa30.2■■■□□ 2.42
SMC4-222ENST00000490207 PIK3C2BO00750 1634 aa30.18■■■□□ 2.42
SMC4-222ENST00000490207 SYNMO15061 1565 aa30.17■■■□□ 2.42
SMC4-222ENST00000490207 IQGAP3Q86VI3 1631 aa30.14■■■□□ 2.42
SMC4-222ENST00000490207 IQGAP1P46940 1657 aa30.14■■■□□ 2.42
SMC4-222ENST00000490207 ANKLE2Q86XL3 938 aa30.14■■■□□ 2.42
SMC4-222ENST00000490207 RPRD2Q5VT52 1461 aaKnown RBP30.13■■■□□ 2.41
SMC4-222ENST00000490207 KDM5AP29375 1690 aaKnown RBP30.13■■■□□ 2.41
SMC4-222ENST00000490207 NOS1P29475 1434 aa30.12■■■□□ 2.41
SMC4-222ENST00000490207 MED14O60244 1454 aa30.12■■■□□ 2.41
SMC4-222ENST00000490207 ZNF335Q9H4Z2 1342 aaPredicted RBP30.11■■■□□ 2.41
SMC4-222ENST00000490207 NPHP4O75161 1426 aaPredicted RBP30.1■■■□□ 2.41
SMC4-222ENST00000490207 SLIT1O75093 1534 aa30.09■■■□□ 2.41
SMC4-222ENST00000490207 IQSEC2Q5JU85 1478 aa30.09■■■□□ 2.41
SMC4-222ENST00000490207 E9PCH4 1651 aa30.08■■■□□ 2.41
SMC4-222ENST00000490207 ARHGAP23Q9P227 1491 aa30.07■■■□□ 2.4
SMC4-222ENST00000490207 ADGRB3O60242 1522 aa30.06■■■□□ 2.4
SMC4-222ENST00000490207 SCAF11Q99590 1463 aaKnown RBP30.05■■■□□ 2.4
SMC4-222ENST00000490207 STAG3Q9UJ98 1225 aa30■■■□□ 2.39
SMC4-222ENST00000490207 NUP155O75694 1391 aa30■■■□□ 2.39
SMC4-222ENST00000490207 IDI1Q13907 227 aa29.99■■■□□ 2.39
SMC4-222ENST00000490207 CPS1P31327 1500 aa29.98■■■□□ 2.39
SMC4-222ENST00000490207 MYO5BQ9ULV0 1848 aa29.97■■■□□ 2.39
SMC4-222ENST00000490207 TMEM2Q9UHN6 1383 aa29.97■■■□□ 2.39
SMC4-222ENST00000490207 NAIPQ13075 1403 aa29.96■■■□□ 2.39
SMC4-222ENST00000490207 SLC52A1Q9NWF4 448 aa29.95■■■□□ 2.39
SMC4-222ENST00000490207 LTKP29376 864 aa29.93■■■□□ 2.38
SMC4-222ENST00000490207 TXNDC2Q86VQ3 553 aa29.93■■■□□ 2.38
SMC4-222ENST00000490207 EID1Q9Y6B2 187 aa29.92■■■□□ 2.38
SMC4-222ENST00000490207 STRCP1A6NGW2 1772 aa29.91■■■□□ 2.38
SMC4-222ENST00000490207 TMEM131LA2VDJ0 1609 aa29.91■■■□□ 2.38
SMC4-222ENST00000490207 HFM1A2PYH4 1435 aa29.9■■■□□ 2.38
SMC4-222ENST00000490207 SPHKAPQ2M3C7 1700 aa29.9■■■□□ 2.38
SMC4-222ENST00000490207 ZFYVE9O95405 1425 aa29.81■■■□□ 2.36
SMC4-222ENST00000490207 RIMS2Q9UQ26 1411 aa29.79■■■□□ 2.36
SMC4-222ENST00000490207 UBAP1LF5GYI3 381 aa29.77■■■□□ 2.36
SMC4-222ENST00000490207 CHGAP10645 457 aaKnown RBP29.76■■■□□ 2.35
SMC4-222ENST00000490207 LRRC7Q96NW7 1537 aa29.76■■■□□ 2.35
SMC4-222ENST00000490207 TRPM2O94759 1503 aa29.74■■■□□ 2.35
SMC4-222ENST00000490207 CLTCL1P53675 1640 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms