RNA–Protein interactions for RNA: ENST00000489559.1

ACAA1-218, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 4

Gene ACAA1, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-218ENST00000489559 NPATQ14207 1427 aa34.51■■■■□ 3.12
ACAA1-218ENST00000489559 RNF17Q9BXT8 1623 aaKnown RBP34.51■■■■□ 3.11
ACAA1-218ENST00000489559 KDM5DQ9BY66 1539 aa34.5■■■■□ 3.11
ACAA1-218ENST00000489559 KIF15Q9NS87 1388 aa34.48■■■■□ 3.11
ACAA1-218ENST00000489559 FAM50AQ14320 339 aaKnown RBP34.46■■■■□ 3.11
ACAA1-218ENST00000489559 PTPRKQ15262 1439 aa34.43■■■■□ 3.1
ACAA1-218ENST00000489559 ANKRD30AQ9BXX3 1397 aa34.41■■■■□ 3.1
ACAA1-218ENST00000489559 WASHC2CQ9Y4E1 1318 aa34.41■■■■□ 3.1
ACAA1-218ENST00000489559 RRP7BPQ9NSQ0 103 aa34.41■■■■□ 3.1
ACAA1-218ENST00000489559 ERBINQ96RT1 1412 aa34.4■■■■□ 3.1
ACAA1-218ENST00000489559 PPARGC1BQ86YN6 1023 aaKnown RBP34.4■■■■□ 3.1
ACAA1-218ENST00000489559 ZC3H13Q5T200 1668 aaKnown RBP34.4■■■■□ 3.1
ACAA1-218ENST00000489559 CHIC2Q9UKJ5 165 aa34.39■■■■□ 3.1
ACAA1-218ENST00000489559 MROH1Q8NDA8 1641 aa34.39■■■■□ 3.1
ACAA1-218ENST00000489559 ADGRL2O95490 1459 aa34.37■■■■□ 3.09
ACAA1-218ENST00000489559 MYO3AQ8NEV4 1616 aa34.36■■■■□ 3.09
ACAA1-218ENST00000489559 NCOA1Q15788 1441 aa34.35■■■■□ 3.09
ACAA1-218ENST00000489559 PZPP20742 1482 aa34.34■■■■□ 3.09
ACAA1-218ENST00000489559 ABCC3O15438 1527 aa34.34■■■■□ 3.09
ACAA1-218ENST00000489559 ZNF142P52746 1687 aaPredicted RBP34.32■■■■□ 3.08
ACAA1-218ENST00000489559 CEP152O94986 1710 aa34.31■■■■□ 3.08
ACAA1-218ENST00000489559 DEPDC5O75140 1603 aa34.3■■■■□ 3.08
ACAA1-218ENST00000489559 PRDM15P57071 1507 aaPredicted RBP34.3■■■■□ 3.08
ACAA1-218ENST00000489559 STRCQ7RTU9 1775 aa34.29■■■■□ 3.08
ACAA1-218ENST00000489559 CEP170BQ9Y4F5 1589 aaPredicted RBP34.26■■■■□ 3.07
ACAA1-218ENST00000489559 CAMSAP1Q5T5Y3 1602 aa34.25■■■■□ 3.07
ACAA1-218ENST00000489559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.24■■■■□ 3.07
ACAA1-218ENST00000489559 FBXO31Q5XUX0 539 aaPredicted RBP34.24■■■■□ 3.07
ACAA1-218ENST00000489559 TNRQ92752 1358 aa34.23■■■■□ 3.07
ACAA1-218ENST00000489559 A2ML1A8K2U0 1454 aa34.18■■■■□ 3.06
ACAA1-218ENST00000489559 KANK1Q14678 1352 aa34.17■■■■□ 3.06
ACAA1-218ENST00000489559 ANKRD50Q9ULJ7 1429 aa34.16■■■■□ 3.06
ACAA1-218ENST00000489559 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.16■■■■□ 3.06
ACAA1-218ENST00000489559 SPATA31D1Q6ZQQ2 1576 aa34.15■■■■□ 3.06
ACAA1-218ENST00000489559 ROCK1Q13464 1354 aa34.15■■■■□ 3.06
ACAA1-218ENST00000489559 DMRT2Q9Y5R5 561 aa34.15■■■■□ 3.06
ACAA1-218ENST00000489559 RRBP1Q9P2E9 1410 aaKnown RBP34.13■■■■□ 3.05
ACAA1-218ENST00000489559 VWDEQ8N2E2 1590 aa34.13■■■■□ 3.05
ACAA1-218ENST00000489559 CFAP65Q6ZU64 1925 aaKnown RBP34.12■■■■□ 3.05
ACAA1-218ENST00000489559 ERVK-7P63135 1459 aa34.12■■■■□ 3.05
ACAA1-218ENST00000489559 PLA2R1Q13018 1463 aa34.11■■■■□ 3.05
ACAA1-218ENST00000489559 NLRP1Q9C000 1473 aa34.11■■■■□ 3.05
ACAA1-218ENST00000489559 ARHGAP31Q2M1Z3 1444 aa34.11■■■■□ 3.05
ACAA1-218ENST00000489559 LMTK2Q8IWU2 1503 aa34.09■■■■□ 3.05
ACAA1-218ENST00000489559 ITGAEP38570 1179 aa34.09■■■■□ 3.05
ACAA1-218ENST00000489559 PTPRTO14522 1441 aa34.08■■■■□ 3.05
ACAA1-218ENST00000489559 UNC13BO14795 1591 aa34.02■■■■□ 3.04
ACAA1-218ENST00000489559 UGGT1Q9NYU2 1555 aa34.02■■■■□ 3.04
ACAA1-218ENST00000489559 PKD2Q13563 968 aa34■■■■□ 3.03
ACAA1-218ENST00000489559 NCKAP5LQ9HCH0 1330 aa34■■■■□ 3.03
ACAA1-218ENST00000489559 EFCAB6Q5THR3 1501 aa33.99■■■■□ 3.03
ACAA1-218ENST00000489559 POLR1AO95602 1720 aaPredicted RBP33.97■■■■□ 3.03
ACAA1-218ENST00000489559 TET3O43151 1660 aa33.94■■■■□ 3.02
ACAA1-218ENST00000489559 THEMISQ8N1K5 641 aaPredicted RBP33.94■■■■□ 3.02
ACAA1-218ENST00000489559 UBR1Q8IWV7 1749 aa33.91■■■■□ 3.02
ACAA1-218ENST00000489559 GCC2Q8IWJ2 1684 aa33.91■■■■□ 3.02
ACAA1-218ENST00000489559 ILDR1Q86SU0 546 aaPredicted RBP33.89■■■■□ 3.02
ACAA1-218ENST00000489559 RPRD2Q5VT52 1461 aaKnown RBP33.88■■■■□ 3.01
ACAA1-218ENST00000489559 IQGAP3Q86VI3 1631 aa33.88■■■■□ 3.01
ACAA1-218ENST00000489559 NEURL4Q96JN8 1562 aa33.87■■■■□ 3.01
ACAA1-218ENST00000489559 SYNMO15061 1565 aa33.85■■■■□ 3.01
ACAA1-218ENST00000489559 PIK3C2BO00750 1634 aa33.85■■■■□ 3.01
ACAA1-218ENST00000489559 NOS1P29475 1434 aa33.85■■■■□ 3.01
ACAA1-218ENST00000489559 ANKLE2Q86XL3 938 aa33.84■■■■□ 3.01
ACAA1-218ENST00000489559 CERKQ8TCT0 537 aa33.84■■■■□ 3.01
ACAA1-218ENST00000489559 KDM5AP29375 1690 aaKnown RBP33.8■■■■□ 3
ACAA1-218ENST00000489559 FBXO41Q8TF61 875 aa33.8■■■■□ 3
ACAA1-218ENST00000489559 E9PCH4 1651 aa33.8■■■■□ 3
ACAA1-218ENST00000489559 NUP155O75694 1391 aa33.79■■■■□ 3
ACAA1-218ENST00000489559 LTBP4Q8N2S1 1624 aa33.79■■■■□ 3
ACAA1-218ENST00000489559 NAIPQ13075 1403 aa33.79■■■■□ 3
ACAA1-218ENST00000489559 MED14O60244 1454 aa33.76■■■■□ 3
ACAA1-218ENST00000489559 IDI1Q13907 227 aa33.75■■■□□ 2.99
ACAA1-218ENST00000489559 SLIT1O75093 1534 aa33.74■■■□□ 2.99
ACAA1-218ENST00000489559 NPHP4O75161 1426 aaPredicted RBP33.73■■■□□ 2.99
ACAA1-218ENST00000489559 ARHGAP23Q9P227 1491 aa33.73■■■□□ 2.99
ACAA1-218ENST00000489559 IQGAP1P46940 1657 aa33.73■■■□□ 2.99
ACAA1-218ENST00000489559 HFM1A2PYH4 1435 aa33.72■■■□□ 2.99
ACAA1-218ENST00000489559 SLC52A1Q9NWF4 448 aa33.72■■■□□ 2.99
ACAA1-218ENST00000489559 STAG3Q9UJ98 1225 aa33.72■■■□□ 2.99
ACAA1-218ENST00000489559 ZNF335Q9H4Z2 1342 aaPredicted RBP33.71■■■□□ 2.99
ACAA1-218ENST00000489559 ADGRB3O60242 1522 aa33.7■■■□□ 2.99
ACAA1-218ENST00000489559 SCAF11Q99590 1463 aaKnown RBP33.69■■■□□ 2.98
ACAA1-218ENST00000489559 TMEM2Q9UHN6 1383 aa33.65■■■□□ 2.98
ACAA1-218ENST00000489559 TXNDC2Q86VQ3 553 aa33.63■■■□□ 2.97
ACAA1-218ENST00000489559 IQSEC2Q5JU85 1478 aa33.63■■■□□ 2.97
ACAA1-218ENST00000489559 EID1Q9Y6B2 187 aa33.62■■■□□ 2.97
ACAA1-218ENST00000489559 MYO5BQ9ULV0 1848 aa33.62■■■□□ 2.97
ACAA1-218ENST00000489559 LTKP29376 864 aa33.61■■■□□ 2.97
ACAA1-218ENST00000489559 SPHKAPQ2M3C7 1700 aa33.59■■■□□ 2.97
ACAA1-218ENST00000489559 TMEM131LA2VDJ0 1609 aa33.58■■■□□ 2.97
ACAA1-218ENST00000489559 CPS1P31327 1500 aa33.54■■■□□ 2.96
ACAA1-218ENST00000489559 TRIM52Q96A61 297 aa33.52■■■□□ 2.96
ACAA1-218ENST00000489559 CHGAP10645 457 aaKnown RBP33.47■■■□□ 2.95
ACAA1-218ENST00000489559 STRCP1A6NGW2 1772 aa33.47■■■□□ 2.95
ACAA1-218ENST00000489559 ZFYVE9O95405 1425 aa33.46■■■□□ 2.95
ACAA1-218ENST00000489559 RIMS2Q9UQ26 1411 aa33.45■■■□□ 2.94
ACAA1-218ENST00000489559 TRPM2O94759 1503 aa33.43■■■□□ 2.94
ACAA1-218ENST00000489559 HDGFP51858 240 aaKnown RBP33.42■■■□□ 2.94
ACAA1-218ENST00000489559 SLC4A1APQ9BWU0 796 aaKnown RBP33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms