RNA–Protein interactions for RNA: ENST00000489559.1

ACAA1-218, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 4

Gene ACAA1, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-218ENST00000489559 NISCHQ9Y2I1 1504 aa54.73■■■■■ 6.35
ACAA1-218ENST00000489559 CCDC180Q9P1Z9 1646 aa48.85■■■■■ 5.41
ACAA1-218ENST00000489559 ABCC9O60706 1549 aa47.97■■■■■ 5.27
ACAA1-218ENST00000489559 RB1CC1Q8TDY2 1594 aa46.07■■■■■ 4.97
ACAA1-218ENST00000489559 NACADO15069 1562 aa45.94■■■■■ 4.94
ACAA1-218ENST00000489559 DCAF8L2P0C7V8 631 aa45.77■■■■■ 4.92
ACAA1-218ENST00000489559 MYO15BQ96JP2 1530 aa45.58■■■■■ 4.89
ACAA1-218ENST00000489559 ZCCHC6Q5VYS8 1495 aaKnown RBP45.54■■■■■ 4.88
ACAA1-218ENST00000489559 DCAF1Q9Y4B6 1507 aa45.29■■■■■ 4.84
ACAA1-218ENST00000489559 UNC13AQ9UPW8 1703 aa45.08■■■■■ 4.81
ACAA1-218ENST00000489559 PABPN1Q86U42 306 aaKnown RBP eCLIP44.73■■■■■ 4.75
ACAA1-218ENST00000489559 BICRAQ9NZM4 1560 aa44.67■■■■■ 4.74
ACAA1-218ENST00000489559 SCRIBQ14160 1630 aa44.5■■■■■ 4.71
ACAA1-218ENST00000489559 DNAJC5BQ9UF47 199 aa44.21■■■■■ 4.67
ACAA1-218ENST00000489559 SHROOM4Q9ULL8 1493 aa44.19■■■■■ 4.66
ACAA1-218ENST00000489559 EIF4G1Q04637 1599 aaKnown RBP43.51■■■■■ 4.56
ACAA1-218ENST00000489559 CC2D2AQ9P2K1 1620 aa43.41■■■■■ 4.54
ACAA1-218ENST00000489559 CECR2Q9BXF3 1484 aa43.13■■■■■ 4.49
ACAA1-218ENST00000489559 SMARCA4P51532 1647 aa42.55■■■■■ 4.4
ACAA1-218ENST00000489559 BAZ1AQ9NRL2 1556 aaPredicted RBP42.46■■■■■ 4.39
ACAA1-218ENST00000489559 NCAPD3P42695 1498 aa42.36■■■■■ 4.37
ACAA1-218ENST00000489559 ATAD2BQ9ULI0 1458 aa42.35■■■■■ 4.37
ACAA1-218ENST00000489559 SMARCA2P51531 1590 aa42.31■■■■■ 4.36
ACAA1-218ENST00000489559 HMGXB3Q12766 1538 aa42.17■■■■■ 4.34
ACAA1-218ENST00000489559 MROH2BQ7Z745 1585 aa42.17■■■■■ 4.34
ACAA1-218ENST00000489559 PEG3Q9GZU2 1588 aa42.14■■■■■ 4.34
ACAA1-218ENST00000489559 BAZ1BQ9UIG0 1483 aaKnown RBP42■■■■■ 4.31
ACAA1-218ENST00000489559 WIZO95785 1651 aa41.73■■■■■ 4.27
ACAA1-218ENST00000489559 RSF1Q96T23 1441 aaPredicted RBP41.57■■■■■ 4.25
ACAA1-218ENST00000489559 NESP48681 1621 aa41.43■■■■■ 4.22
ACAA1-218ENST00000489559 ERCC6Q03468 1493 aa41.37■■■■■ 4.21
ACAA1-218ENST00000489559 LAMC3Q9Y6N6 1575 aa41.33■■■■■ 4.21
ACAA1-218ENST00000489559 TOP2AP11388 1531 aaKnown RBP41.27■■■■■ 4.2
ACAA1-218ENST00000489559 CADPSQ9ULU8 1353 aa41.11■■■■■ 4.17
ACAA1-218ENST00000489559 CUX2O14529 1486 aa41.04■■■■■ 4.16
ACAA1-218ENST00000489559 PDS5BQ9NTI5 1447 aa41.02■■■■■ 4.16
ACAA1-218ENST00000489559 KIF21AQ7Z4S6 1674 aa41■■■■■ 4.15
ACAA1-218ENST00000489559 THOC2Q8NI27 1593 aaKnown RBP40.91■■■■■ 4.14
ACAA1-218ENST00000489559 CFTRP13569 1480 aa40.82■■■■■ 4.12
ACAA1-218ENST00000489559 CCDC88BA6NC98 1476 aa40.75■■■■■ 4.11
ACAA1-218ENST00000489559 FANCD2Q9BXW9 1451 aa40.64■■■■■ 4.1
ACAA1-218ENST00000489559 MRC2Q9UBG0 1479 aa40.64■■■■■ 4.1
ACAA1-218ENST00000489559 CEP164Q9UPV0 1460 aa40.64■■■■■ 4.1
ACAA1-218ENST00000489559 PRDM2Q13029 1718 aa40.61■■■■■ 4.09
ACAA1-218ENST00000489559 WDR62O43379 1518 aa40.52■■■■■ 4.08
ACAA1-218ENST00000489559 SUPT5HO00267 1087 aaKnown RBP40.29■■■■■ 4.04
ACAA1-218ENST00000489559 URB2Q14146 1524 aaKnown RBP40.26■■■■■ 4.04
ACAA1-218ENST00000489559 DNAJC5Q9H3Z4 198 aa40.05■■■■■ 4
ACAA1-218ENST00000489559 TOPBP1Q92547 1522 aa39.98■■■■□ 3.99
ACAA1-218ENST00000489559 ABCC8Q09428 1581 aa39.97■■■■□ 3.99
ACAA1-218ENST00000489559 DNMBPQ6XZF7 1577 aa39.93■■■■□ 3.98
ACAA1-218ENST00000489559 IFT140Q96RY7 1462 aa39.79■■■■□ 3.96
ACAA1-218ENST00000489559 POLA1P09884 1462 aaPredicted RBP39.62■■■■□ 3.93
ACAA1-218ENST00000489559 ZNF608Q9ULD9 1512 aaPredicted RBP39.61■■■■□ 3.93
ACAA1-218ENST00000489559 TARBP1Q13395 1621 aaKnown RBP39.58■■■■□ 3.93
ACAA1-218ENST00000489559 CUX1P39880 1505 aa39.58■■■■□ 3.93
ACAA1-218ENST00000489559 EIF4G3O43432 1585 aaKnown RBP39.5■■■■□ 3.91
ACAA1-218ENST00000489559 FGD5Q6ZNL6 1462 aa39.49■■■■□ 3.91
ACAA1-218ENST00000489559 SOGA1O94964 1423 aa39.44■■■■□ 3.9
ACAA1-218ENST00000489559 RAD54L2Q9Y4B4 1467 aa39.43■■■■□ 3.9
ACAA1-218ENST00000489559 AQRO60306 1485 aaKnown RBP eCLIP39.35■■■■□ 3.892e-8■■■■■ 39.8
ACAA1-218ENST00000489559 WDR97A6NE52 1622 aa39.29■■■■□ 3.88
ACAA1-218ENST00000489559 OSCARQ8IYS5 282 aa39.25■■■■□ 3.87
ACAA1-218ENST00000489559 TDRD9Q8NDG6 1382 aaKnown RBP39.23■■■■□ 3.87
ACAA1-218ENST00000489559 WRNQ14191 1432 aaPredicted RBP eCLIP39.22■■■■□ 3.87
ACAA1-218ENST00000489559 BIVM-ERCC5R4GMW8 1640 aa39.22■■■■□ 3.87
ACAA1-218ENST00000489559 TOP2BQ02880 1626 aa39.19■■■■□ 3.86
ACAA1-218ENST00000489559 SYNJ1O43426 1573 aa39.16■■■■□ 3.86
ACAA1-218ENST00000489559 ABCA10Q8WWZ4 1543 aa39.09■■■■□ 3.85
ACAA1-218ENST00000489559 CHD1O14646 1710 aa39.09■■■■□ 3.85
ACAA1-218ENST00000489559 GRIN2BQ13224 1484 aa39.02■■■■□ 3.84
ACAA1-218ENST00000489559 SNAPC4Q5SXM2 1469 aa39.01■■■■□ 3.84
ACAA1-218ENST00000489559 PBRM1Q86U86 1689 aa39■■■■□ 3.83
ACAA1-218ENST00000489559 ABCA5Q8WWZ7 1642 aa39■■■■□ 3.83
ACAA1-218ENST00000489559 GAPVD1Q14C86 1478 aa38.99■■■■□ 3.83
ACAA1-218ENST00000489559 MAGI1Q96QZ7 1491 aaPredicted RBP38.96■■■■□ 3.83
ACAA1-218ENST00000489559 FBLN2P98095 1184 aa38.91■■■■□ 3.82
ACAA1-218ENST00000489559 SYNJ2O15056 1496 aa38.8■■■■□ 3.8
ACAA1-218ENST00000489559 CHMP7Q8WUX9 453 aaPredicted RBP38.78■■■■□ 3.8
ACAA1-218ENST00000489559 RIMBP3CA6NJZ7 1639 aa38.72■■■■□ 3.79
ACAA1-218ENST00000489559 RIMBP3BA6NNM3 1639 aa38.72■■■■□ 3.79
ACAA1-218ENST00000489559 RIMBP3Q9UFD9 1639 aa38.72■■■■□ 3.79
ACAA1-218ENST00000489559 ARHGEF11O15085 1522 aa38.66■■■■□ 3.78
ACAA1-218ENST00000489559 ADAMTS12P58397 1594 aa38.64■■■■□ 3.78
ACAA1-218ENST00000489559 ERICH3Q5RHP9 1530 aa38.63■■■■□ 3.78
ACAA1-218ENST00000489559 CLASP1Q7Z460 1538 aa38.62■■■■□ 3.77
ACAA1-218ENST00000489559 TRIM41Q8WV44 630 aa38.61■■■■□ 3.77
ACAA1-218ENST00000489559 FHAD1B1AJZ9 1412 aa38.53■■■■□ 3.76
ACAA1-218ENST00000489559 GRIN2AQ12879 1464 aa38.53■■■■□ 3.76
ACAA1-218ENST00000489559 KIF27Q86VH2 1401 aa38.42■■■■□ 3.74
ACAA1-218ENST00000489559 CEP170Q5SW79 1584 aa38.36■■■■□ 3.73
ACAA1-218ENST00000489559 NUP160Q12769 1436 aa38.36■■■■□ 3.73
ACAA1-218ENST00000489559 ARAP1Q96P48 1450 aa38.32■■■■□ 3.72
ACAA1-218ENST00000489559 IGF1RP08069 1367 aa38.27■■■■□ 3.72
ACAA1-218ENST00000489559 CUL7Q14999 1698 aa38.27■■■■□ 3.72
ACAA1-218ENST00000489559 CYB5RLQ6IPT4 315 aa38.26■■■■□ 3.72
ACAA1-218ENST00000489559 SHROOM2Q13796 1616 aa38.14■■■■□ 3.7
ACAA1-218ENST00000489559 RUSC2Q8N2Y8 1516 aa38.07■■■■□ 3.69
ACAA1-218ENST00000489559 ERCC6L2Q5T890 1561 aa38.05■■■■□ 3.68
ACAA1-218ENST00000489559 CARMIL1Q5VZK9 1371 aa38.05■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms