RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
COL16A1-214ENST00000488128 HNRNPMP52272 730 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL16A1-214ENST00000488128 ATP10BO94823 1461 aa18.81■□□□□ 0.6
COL16A1-214ENST00000488128 ANKRD30AQ9BXX3 1397 aa18.81■□□□□ 0.6
COL16A1-214ENST00000488128 ANKRD50Q9ULJ7 1429 aa18.78■□□□□ 0.6
COL16A1-214ENST00000488128 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
COL16A1-214ENST00000488128 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
COL16A1-214ENST00000488128 NUP155O75694 1391 aa18.77■□□□□ 0.6
COL16A1-214ENST00000488128 TSPY4P0CV99 314 aa18.77■□□□□ 0.6
COL16A1-214ENST00000488128 TSPY10P0CW01 314 aa18.77■□□□□ 0.6
COL16A1-214ENST00000488128 USP35Q9P2H5 1018 aa18.76■□□□□ 0.59
COL16A1-214ENST00000488128 NFKBIBQ15653 356 aa18.76■□□□□ 0.59
COL16A1-214ENST00000488128 KIAA1107Q9UPP5 1409 aa18.76■□□□□ 0.59
COL16A1-214ENST00000488128 C20orf194Q5TEA3 1177 aa18.75■□□□□ 0.59
COL16A1-214ENST00000488128 ITSN2Q9NZM3 1697 aa18.75■□□□□ 0.59
COL16A1-214ENST00000488128 GSE1Q14687 1217 aa18.75■□□□□ 0.59
COL16A1-214ENST00000488128 PTPRGP23470 1445 aa18.75■□□□□ 0.59
COL16A1-214ENST00000488128 CC2D1BQ5T0F9 858 aaKnown RBP18.75■□□□□ 0.59
COL16A1-214ENST00000488128 FRAT1Q92837 279 aaPredicted RBP18.75■□□□□ 0.59
COL16A1-214ENST00000488128 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
COL16A1-214ENST00000488128 DAXXQ9UER7 740 aaPredicted RBP18.74■□□□□ 0.59
COL16A1-214ENST00000488128 C9orf84Q5VXU9 1444 aa18.74■□□□□ 0.59
COL16A1-214ENST00000488128 ABCA8O94911 1581 aa18.73■□□□□ 0.59
COL16A1-214ENST00000488128 WASHC2CQ9Y4E1 1318 aa18.73■□□□□ 0.59
COL16A1-214ENST00000488128 KIF15Q9NS87 1388 aa18.72■□□□□ 0.59
COL16A1-214ENST00000488128 ADGRL2O95490 1459 aa18.72■□□□□ 0.59
COL16A1-214ENST00000488128 ABCC10Q5T3U5 1492 aa18.72■□□□□ 0.59
COL16A1-214ENST00000488128 DCAF11Q8TEB1 546 aa18.72■□□□□ 0.59
COL16A1-214ENST00000488128 ADCY10Q96PN6 1610 aa18.71■□□□□ 0.59
COL16A1-214ENST00000488128 LRPPRCP42704 1394 aaKnown RBP18.71■□□□□ 0.59
COL16A1-214ENST00000488128 MS4A1P11836 297 aa18.7■□□□□ 0.58
COL16A1-214ENST00000488128 ADGBQ8N7X0 1667 aa18.68■□□□□ 0.58
COL16A1-214ENST00000488128 RGS3P49796 1198 aa18.67■□□□□ 0.58
COL16A1-214ENST00000488128 POLR1AO95602 1720 aaPredicted RBP18.67■□□□□ 0.58
COL16A1-214ENST00000488128 BRD4O60885 1362 aaPredicted RBP18.67■□□□□ 0.58
COL16A1-214ENST00000488128 CDC42BPAQ5VT25 1732 aa18.67■□□□□ 0.58
COL16A1-214ENST00000488128 RALBP1Q15311 655 aa18.67■□□□□ 0.58
COL16A1-214ENST00000488128 FRAT2O75474 233 aaPredicted RBP18.66■□□□□ 0.58
COL16A1-214ENST00000488128 RGL3Q3MIN7 710 aa18.65■□□□□ 0.58
COL16A1-214ENST00000488128 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
COL16A1-214ENST00000488128 CROCC2H7BZ55 1655 aa18.65■□□□□ 0.58
COL16A1-214ENST00000488128 DDRGK1Q96HY6 314 aa18.65■□□□□ 0.58
COL16A1-214ENST00000488128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.58
COL16A1-214ENST00000488128 MBD5Q9P267 1494 aa18.63■□□□□ 0.57
COL16A1-214ENST00000488128 ROCK2O75116 1388 aaKnown RBP18.61■□□□□ 0.57
COL16A1-214ENST00000488128 KDM5CP41229 1560 aa18.61■□□□□ 0.57
COL16A1-214ENST00000488128 ARID4BQ4LE39 1312 aaPredicted RBP18.6■□□□□ 0.57
COL16A1-214ENST00000488128 NBPF1Q3BBV0 1214 aa18.6■□□□□ 0.57
COL16A1-214ENST00000488128 ARXQ96QS3 562 aa18.6■□□□□ 0.57
COL16A1-214ENST00000488128 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
COL16A1-214ENST00000488128 KTN1Q86UP2 1357 aaKnown RBP18.59■□□□□ 0.57
COL16A1-214ENST00000488128 PDE3BQ13370 1112 aa18.58■□□□□ 0.57
COL16A1-214ENST00000488128 CCDC141Q6ZP82 1450 aa18.55■□□□□ 0.56
COL16A1-214ENST00000488128 SAMD9LQ8IVG5 1584 aa18.55■□□□□ 0.56
COL16A1-214ENST00000488128 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
COL16A1-214ENST00000488128 C8orf34Q49A92 452 aa18.54■□□□□ 0.56
COL16A1-214ENST00000488128 PANK3Q9H999 370 aa18.54■□□□□ 0.56
COL16A1-214ENST00000488128 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
COL16A1-214ENST00000488128 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
COL16A1-214ENST00000488128 ARHGAP5Q13017 1502 aa18.52■□□□□ 0.56
COL16A1-214ENST00000488128 FAM161AQ3B820 660 aa18.52■□□□□ 0.56
COL16A1-214ENST00000488128 SYCP2Q9BX26 1530 aa18.51■□□□□ 0.55
COL16A1-214ENST00000488128 UHRF1BP1Q6BDS2 1440 aa18.51■□□□□ 0.55
COL16A1-214ENST00000488128 PARD3Q8TEW0 1356 aa18.5■□□□□ 0.55
COL16A1-214ENST00000488128 CHD1O14646 1710 aa18.5■□□□□ 0.55
COL16A1-214ENST00000488128 RSPH4AQ5TD94 716 aa18.5■□□□□ 0.55
COL16A1-214ENST00000488128 RALGAPBQ86X10 1494 aa18.5■□□□□ 0.55
COL16A1-214ENST00000488128 KDM2BQ8NHM5 1336 aa18.5■□□□□ 0.55
COL16A1-214ENST00000488128 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
COL16A1-214ENST00000488128 ARHGEF5Q12774 1597 aa18.49■□□□□ 0.55
COL16A1-214ENST00000488128 FAM135AQ9P2D6 1515 aa18.49■□□□□ 0.55
COL16A1-214ENST00000488128 SLKQ9H2G2 1235 aaPredicted RBP18.49■□□□□ 0.55
COL16A1-214ENST00000488128 TTC37Q6PGP7 1564 aa18.49■□□□□ 0.55
COL16A1-214ENST00000488128 POGKQ9P215 609 aa18.48■□□□□ 0.55
COL16A1-214ENST00000488128 CENPQQ7L2Z9 268 aaPredicted RBP18.48■□□□□ 0.55
COL16A1-214ENST00000488128 KDM5DQ9BY66 1539 aa18.47■□□□□ 0.55
COL16A1-214ENST00000488128 CCDC144AA2RUR9 1427 aa18.47■□□□□ 0.55
COL16A1-214ENST00000488128 CCDC146Q8IYE0 955 aa18.47■□□□□ 0.55
COL16A1-214ENST00000488128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.46■□□□□ 0.55
COL16A1-214ENST00000488128 PREX2Q70Z35 1606 aa18.46■□□□□ 0.55
COL16A1-214ENST00000488128 UBE2Q2Q8WVN8 375 aa18.45■□□□□ 0.54
COL16A1-214ENST00000488128 PLEKHH2Q8IVE3 1493 aa18.45■□□□□ 0.54
COL16A1-214ENST00000488128 DISP3Q9P2K9 1392 aa18.44■□□□□ 0.54
COL16A1-214ENST00000488128 ARHGEF12Q9NZN5 1544 aa18.44■□□□□ 0.54
COL16A1-214ENST00000488128 DUSP27Q5VZP5 1158 aa18.44■□□□□ 0.54
COL16A1-214ENST00000488128 PLEKHH1Q9ULM0 1364 aa18.43■□□□□ 0.54
COL16A1-214ENST00000488128 SEC24BO95487 1268 aa18.43■□□□□ 0.54
COL16A1-214ENST00000488128 BCAR3O75815 825 aa18.42■□□□□ 0.54
COL16A1-214ENST00000488128 PLA2R1Q13018 1463 aa18.42■□□□□ 0.54
COL16A1-214ENST00000488128 WDR43Q15061 677 aaKnown RBP eCLIP18.42■□□□□ 0.54
COL16A1-214ENST00000488128 SPRYD3Q8NCJ5 442 aa18.41■□□□□ 0.54
COL16A1-214ENST00000488128 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
COL16A1-214ENST00000488128 ABCC2Q92887 1545 aa18.4■□□□□ 0.54
COL16A1-214ENST00000488128 PRAG1Q86YV5 1406 aa18.38■□□□□ 0.53
COL16A1-214ENST00000488128 IGHDP01880 384 aa18.38■□□□□ 0.53
COL16A1-214ENST00000488128 EFCAB2Q5VUJ9 269 aa18.38■□□□□ 0.53
COL16A1-214ENST00000488128 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
COL16A1-214ENST00000488128 AFAP1Q8N556 730 aa18.38■□□□□ 0.53
COL16A1-214ENST00000488128 TESK2Q96S53 571 aa18.37■□□□□ 0.53
COL16A1-214ENST00000488128 SHROOM2Q13796 1616 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms