RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TNRQ92752 1358 aa19.41■□□□□ 0.7
SREBF1-215ENST00000487401 CAMSAP1Q5T5Y3 1602 aa19.39■□□□□ 0.69
SREBF1-215ENST00000487401 STRCQ7RTU9 1775 aa19.38■□□□□ 0.69
SREBF1-215ENST00000487401 KDM5DQ9BY66 1539 aa19.37■□□□□ 0.69
SREBF1-215ENST00000487401 RRP7BPQ9NSQ0 103 aa19.37■□□□□ 0.69
SREBF1-215ENST00000487401 FAM135AQ9P2D6 1515 aa19.35■□□□□ 0.69
SREBF1-215ENST00000487401 PZPP20742 1482 aa19.35■□□□□ 0.69
SREBF1-215ENST00000487401 A2ML1A8K2U0 1454 aa19.35■□□□□ 0.69
SREBF1-215ENST00000487401 PLA2R1Q13018 1463 aa19.35■□□□□ 0.69
SREBF1-215ENST00000487401 THEMISQ8N1K5 641 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-215ENST00000487401 ABCC5O15440 1437 aa19.34■□□□□ 0.69
SREBF1-215ENST00000487401 KIF15Q9NS87 1388 aa19.33■□□□□ 0.69
SREBF1-215ENST00000487401 MAST1Q9Y2H9 1570 aa19.33■□□□□ 0.69
SREBF1-215ENST00000487401 CEP170BQ9Y4F5 1589 aaPredicted RBP19.33■□□□□ 0.69
SREBF1-215ENST00000487401 ANKLE2Q86XL3 938 aa19.31■□□□□ 0.68
SREBF1-215ENST00000487401 CHIC2Q9UKJ5 165 aa19.31■□□□□ 0.68
SREBF1-215ENST00000487401 MYO3AQ8NEV4 1616 aa19.31■□□□□ 0.68
SREBF1-215ENST00000487401 FGD6Q6ZV73 1430 aa19.31■□□□□ 0.68
SREBF1-215ENST00000487401 ZNF335Q9H4Z2 1342 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-215ENST00000487401 TCOF1Q13428 1488 aaKnown RBP19.3■□□□□ 0.68
SREBF1-215ENST00000487401 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.3■□□□□ 0.684e-7■□□□□ 10.1
SREBF1-215ENST00000487401 DUOX2Q9NRD8 1548 aa19.29■□□□□ 0.68
SREBF1-215ENST00000487401 FAM50AQ14320 339 aaKnown RBP19.28■□□□□ 0.68
SREBF1-215ENST00000487401 DAPK1P53355 1430 aa19.27■□□□□ 0.68
SREBF1-215ENST00000487401 ANKRD30AQ9BXX3 1397 aa19.27■□□□□ 0.68
SREBF1-215ENST00000487401 NLRP1Q9C000 1473 aa19.27■□□□□ 0.67
SREBF1-215ENST00000487401 SHANK2Q9UPX8 1470 aa19.27■□□□□ 0.67
SREBF1-215ENST00000487401 ABCC3O15438 1527 aa19.26■□□□□ 0.67
SREBF1-215ENST00000487401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.26■□□□□ 0.67
SREBF1-215ENST00000487401 LTBP4Q8N2S1 1624 aa19.25■□□□□ 0.67
SREBF1-215ENST00000487401 PTPN23Q9H3S7 1636 aa19.25■□□□□ 0.67
SREBF1-215ENST00000487401 ERBINQ96RT1 1412 aa19.25■□□□□ 0.67
SREBF1-215ENST00000487401 ZNF142P52746 1687 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-215ENST00000487401 KANK1Q14678 1352 aa19.24■□□□□ 0.67
SREBF1-215ENST00000487401 DNMT1P26358 1616 aaKnown RBP19.23■□□□□ 0.67
SREBF1-215ENST00000487401 RNF17Q9BXT8 1623 aaKnown RBP19.22■□□□□ 0.67
SREBF1-215ENST00000487401 UBAP1LF5GYI3 381 aa19.22■□□□□ 0.67
SREBF1-215ENST00000487401 IQSEC2Q5JU85 1478 aa19.22■□□□□ 0.67
SREBF1-215ENST00000487401 EIF2AK4Q9P2K8 1649 aaKnown RBP19.21■□□□□ 0.67
SREBF1-215ENST00000487401 ERVK-7P63135 1459 aa19.2■□□□□ 0.66
SREBF1-215ENST00000487401 UGGT1Q9NYU2 1555 aa19.19■□□□□ 0.66
SREBF1-215ENST00000487401 NPHP4O75161 1426 aaPredicted RBP19.17■□□□□ 0.66
SREBF1-215ENST00000487401 ARHGAP31Q2M1Z3 1444 aa19.17■□□□□ 0.66
SREBF1-215ENST00000487401 SPATA31D1Q6ZQQ2 1576 aa19.16■□□□□ 0.66
SREBF1-215ENST00000487401 MROH1Q8NDA8 1641 aa19.15■□□□□ 0.66
SREBF1-215ENST00000487401 STAG3Q9UJ98 1225 aa19.15■□□□□ 0.66
SREBF1-215ENST00000487401 ZC3H13Q5T200 1668 aaKnown RBP19.14■□□□□ 0.66
SREBF1-215ENST00000487401 TXNDC2Q86VQ3 553 aa19.13■□□□□ 0.65
SREBF1-215ENST00000487401 EID1Q9Y6B2 187 aa19.13■□□□□ 0.65
SREBF1-215ENST00000487401 PRDM15P57071 1507 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-215ENST00000487401 MED14O60244 1454 aa19.11■□□□□ 0.65
SREBF1-215ENST00000487401 ADGRL2O95490 1459 aa19.1■□□□□ 0.65
SREBF1-215ENST00000487401 TOM1O60784 492 aa19.1■□□□□ 0.65
SREBF1-215ENST00000487401 PPARGC1BQ86YN6 1023 aaKnown RBP19.1■□□□□ 0.65
SREBF1-215ENST00000487401 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
SREBF1-215ENST00000487401 ANKRD50Q9ULJ7 1429 aa19.09■□□□□ 0.65
SREBF1-215ENST00000487401 CROCC2H7BZ55 1655 aa19.09■□□□□ 0.65
SREBF1-215ENST00000487401 LTKP29376 864 aa19.09■□□□□ 0.65
SREBF1-215ENST00000487401 IDI1Q13907 227 aa19.09■□□□□ 0.65
SREBF1-215ENST00000487401 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.65
SREBF1-215ENST00000487401 CPS1P31327 1500 aa19.08■□□□□ 0.64
SREBF1-215ENST00000487401 PIP4K2BP78356 416 aa19.07■□□□□ 0.64
SREBF1-215ENST00000487401 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
SREBF1-215ENST00000487401 LMTK2Q8IWU2 1503 aa19.06■□□□□ 0.64
SREBF1-215ENST00000487401 ITGAEP38570 1179 aa19.06■□□□□ 0.64
SREBF1-215ENST00000487401 SLC52A1Q9NWF4 448 aa19.06■□□□□ 0.64
SREBF1-215ENST00000487401 SCAF11Q99590 1463 aaKnown RBP19.04■□□□□ 0.64
SREBF1-215ENST00000487401 DEPDC5O75140 1603 aa19.04■□□□□ 0.64
SREBF1-215ENST00000487401 CEP152O94986 1710 aa19.04■□□□□ 0.64
SREBF1-215ENST00000487401 TMEM2Q9UHN6 1383 aa19.04■□□□□ 0.64
SREBF1-215ENST00000487401 VWDEQ8N2E2 1590 aa19.02■□□□□ 0.63
SREBF1-215ENST00000487401 ROCK1Q13464 1354 aa19.01■□□□□ 0.63
SREBF1-215ENST00000487401 ARHGAP23Q9P227 1491 aa19.01■□□□□ 0.63
SREBF1-215ENST00000487401 POLR1AO95602 1720 aaPredicted RBP19■□□□□ 0.63
SREBF1-215ENST00000487401 SLIT1O75093 1534 aa19■□□□□ 0.63
SREBF1-215ENST00000487401 NOS1P29475 1434 aa19■□□□□ 0.63
SREBF1-215ENST00000487401 BCANQ96GW7 911 aa18.99■□□□□ 0.63
SREBF1-215ENST00000487401 HSPA1LP34931 641 aa18.97■□□□□ 0.63
SREBF1-215ENST00000487401 HDGFP51858 240 aaKnown RBP18.97■□□□□ 0.63
SREBF1-215ENST00000487401 EFCAB6Q5THR3 1501 aa18.96■□□□□ 0.63
SREBF1-215ENST00000487401 IQGAP1P46940 1657 aa18.96■□□□□ 0.63
SREBF1-215ENST00000487401 UBR1Q8IWV7 1749 aa18.95■□□□□ 0.62
SREBF1-215ENST00000487401 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
SREBF1-215ENST00000487401 SLC26A8Q96RN1 970 aa18.95■□□□□ 0.62
SREBF1-215ENST00000487401 RPRD2Q5VT52 1461 aaKnown RBP18.95■□□□□ 0.62
SREBF1-215ENST00000487401 NUP155O75694 1391 aa18.94■□□□□ 0.62
SREBF1-215ENST00000487401 LRRC7Q96NW7 1537 aa18.94■□□□□ 0.62
SREBF1-215ENST00000487401 PPP1R15AO75807 674 aaPredicted RBP18.93■□□□□ 0.62
SREBF1-215ENST00000487401 PIK3C2BO00750 1634 aa18.92■□□□□ 0.62
SREBF1-215ENST00000487401 KCNA6P17658 529 aa18.92■□□□□ 0.62
SREBF1-215ENST00000487401 SYNMO15061 1565 aa18.91■□□□□ 0.62
SREBF1-215ENST00000487401 ILDR2Q71H61 639 aa18.9■□□□□ 0.62
SREBF1-215ENST00000487401 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
SREBF1-215ENST00000487401 CFAP65Q6ZU64 1925 aaKnown RBP18.9■□□□□ 0.62
SREBF1-215ENST00000487401 PROSER2Q86WR7 435 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-215ENST00000487401 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.89■□□□□ 0.61
SREBF1-215ENST00000487401 ADGRB3O60242 1522 aa18.88■□□□□ 0.61
SREBF1-215ENST00000487401 RIMS2Q9UQ26 1411 aa18.86■□□□□ 0.61
SREBF1-215ENST00000487401 TMEM94Q12767 1356 aa18.84■□□□□ 0.61
SREBF1-215ENST00000487401 PLEKHG1Q9ULL1 1385 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms