RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 NPATQ14207 1427 aa20.02■□□□□ 0.79
CHMP3-208ENST00000486404 DAPK1P53355 1430 aa20.01■□□□□ 0.79
CHMP3-208ENST00000486404 KIF3BO15066 747 aa20■□□□□ 0.79
CHMP3-208ENST00000486404 DUOX2Q9NRD8 1548 aa20■□□□□ 0.79
CHMP3-208ENST00000486404 ZNF142P52746 1687 aaPredicted RBP20■□□□□ 0.79
CHMP3-208ENST00000486404 ZMYM3Q14202 1370 aa19.99■□□□□ 0.79
CHMP3-208ENST00000486404 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
CHMP3-208ENST00000486404 ABCC5O15440 1437 aa19.97■□□□□ 0.79
CHMP3-208ENST00000486404 CEP152O94986 1710 aa19.96■□□□□ 0.79
CHMP3-208ENST00000486404 KIF15Q9NS87 1388 aa19.95■□□□□ 0.79
CHMP3-208ENST00000486404 PTPRKQ15262 1439 aa19.93■□□□□ 0.78
CHMP3-208ENST00000486404 STRCQ7RTU9 1775 aa19.93■□□□□ 0.78
CHMP3-208ENST00000486404 CEP170BQ9Y4F5 1589 aaPredicted RBP19.93■□□□□ 0.78
CHMP3-208ENST00000486404 ERBINQ96RT1 1412 aa19.93■□□□□ 0.78
CHMP3-208ENST00000486404 MROH1Q8NDA8 1641 aa19.92■□□□□ 0.78
CHMP3-208ENST00000486404 PZPP20742 1482 aa19.92■□□□□ 0.78
CHMP3-208ENST00000486404 ABCC3O15438 1527 aa19.92■□□□□ 0.78
CHMP3-208ENST00000486404 CAMSAP1Q5T5Y3 1602 aa19.91■□□□□ 0.78
CHMP3-208ENST00000486404 FAM50AQ14320 339 aaKnown RBP19.91■□□□□ 0.78
CHMP3-208ENST00000486404 WASHC2CQ9Y4E1 1318 aa19.91■□□□□ 0.78
CHMP3-208ENST00000486404 PRDM15P57071 1507 aaPredicted RBP19.91■□□□□ 0.78
CHMP3-208ENST00000486404 ANKRD30AQ9BXX3 1397 aa19.9■□□□□ 0.78
CHMP3-208ENST00000486404 DEPDC5O75140 1603 aa19.9■□□□□ 0.78
CHMP3-208ENST00000486404 RRP7BPQ9NSQ0 103 aa19.87■□□□□ 0.77
CHMP3-208ENST00000486404 ADGRL2O95490 1459 aa19.86■□□□□ 0.77
CHMP3-208ENST00000486404 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
CHMP3-208ENST00000486404 TNRQ92752 1358 aa19.84■□□□□ 0.77
CHMP3-208ENST00000486404 A2ML1A8K2U0 1454 aa19.84■□□□□ 0.77
CHMP3-208ENST00000486404 NCOA1Q15788 1441 aa19.84■□□□□ 0.77
CHMP3-208ENST00000486404 CFAP65Q6ZU64 1925 aaKnown RBP19.83■□□□□ 0.77
CHMP3-208ENST00000486404 POLR1AO95602 1720 aaPredicted RBP19.82■□□□□ 0.76
CHMP3-208ENST00000486404 PPARGC1BQ86YN6 1023 aaKnown RBP19.81■□□□□ 0.76
CHMP3-208ENST00000486404 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
CHMP3-208ENST00000486404 KANK1Q14678 1352 aa19.81■□□□□ 0.76
CHMP3-208ENST00000486404 SPATA31D1Q6ZQQ2 1576 aa19.8■□□□□ 0.76
CHMP3-208ENST00000486404 PLA2R1Q13018 1463 aa19.79■□□□□ 0.76
CHMP3-208ENST00000486404 ERVK-7P63135 1459 aa19.79■□□□□ 0.76
CHMP3-208ENST00000486404 NLRP1Q9C000 1473 aa19.79■□□□□ 0.76
CHMP3-208ENST00000486404 FBXO31Q5XUX0 539 aaPredicted RBP19.77■□□□□ 0.76
CHMP3-208ENST00000486404 PTPRTO14522 1441 aa19.76■□□□□ 0.75
CHMP3-208ENST00000486404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.759e-8■■□□□ 14.4
CHMP3-208ENST00000486404 ANKRD50Q9ULJ7 1429 aa19.75■□□□□ 0.75
CHMP3-208ENST00000486404 VWDEQ8N2E2 1590 aa19.74■□□□□ 0.75
CHMP3-208ENST00000486404 UGGT1Q9NYU2 1555 aa19.74■□□□□ 0.75
CHMP3-208ENST00000486404 EFCAB6Q5THR3 1501 aa19.73■□□□□ 0.75
CHMP3-208ENST00000486404 LMTK2Q8IWU2 1503 aa19.73■□□□□ 0.75
CHMP3-208ENST00000486404 UNC13BO14795 1591 aa19.73■□□□□ 0.75
CHMP3-208ENST00000486404 ILDR1Q86SU0 546 aaPredicted RBP19.72■□□□□ 0.75
CHMP3-208ENST00000486404 GCC2Q8IWJ2 1684 aa19.71■□□□□ 0.75
CHMP3-208ENST00000486404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.71■□□□□ 0.75
CHMP3-208ENST00000486404 ARHGAP31Q2M1Z3 1444 aa19.71■□□□□ 0.75
CHMP3-208ENST00000486404 UBR1Q8IWV7 1749 aa19.71■□□□□ 0.75
CHMP3-208ENST00000486404 ROCK1Q13464 1354 aa19.7■□□□□ 0.74
CHMP3-208ENST00000486404 ITGAEP38570 1179 aa19.7■□□□□ 0.74
CHMP3-208ENST00000486404 TET3O43151 1660 aa19.7■□□□□ 0.74
CHMP3-208ENST00000486404 PKD2Q13563 968 aa19.69■□□□□ 0.74
CHMP3-208ENST00000486404 NCKAP5LQ9HCH0 1330 aa19.69■□□□□ 0.74
CHMP3-208ENST00000486404 NEURL4Q96JN8 1562 aa19.67■□□□□ 0.74
CHMP3-208ENST00000486404 RRBP1Q9P2E9 1410 aaKnown RBP19.67■□□□□ 0.74
CHMP3-208ENST00000486404 PIK3C2BO00750 1634 aa19.66■□□□□ 0.74
CHMP3-208ENST00000486404 FBXO41Q8TF61 875 aa19.65■□□□□ 0.74
CHMP3-208ENST00000486404 IQGAP3Q86VI3 1631 aa19.65■□□□□ 0.74
CHMP3-208ENST00000486404 IQGAP1P46940 1657 aa19.64■□□□□ 0.73
CHMP3-208ENST00000486404 SYNMO15061 1565 aa19.63■□□□□ 0.73
CHMP3-208ENST00000486404 THEMISQ8N1K5 641 aaPredicted RBP19.63■□□□□ 0.73
CHMP3-208ENST00000486404 CERKQ8TCT0 537 aa19.63■□□□□ 0.73
CHMP3-208ENST00000486404 KDM5AP29375 1690 aaKnown RBP19.62■□□□□ 0.73
CHMP3-208ENST00000486404 RPRD2Q5VT52 1461 aaKnown RBP19.62■□□□□ 0.73
CHMP3-208ENST00000486404 LTBP4Q8N2S1 1624 aa19.61■□□□□ 0.73
CHMP3-208ENST00000486404 E9PCH4 1651 aa19.59■□□□□ 0.73
CHMP3-208ENST00000486404 ANKLE2Q86XL3 938 aa19.59■□□□□ 0.73
CHMP3-208ENST00000486404 ADGRB3O60242 1522 aa19.58■□□□□ 0.73
CHMP3-208ENST00000486404 NPHP4O75161 1426 aaPredicted RBP19.58■□□□□ 0.72
CHMP3-208ENST00000486404 NOS1P29475 1434 aa19.56■□□□□ 0.72
CHMP3-208ENST00000486404 SLIT1O75093 1534 aa19.56■□□□□ 0.72
CHMP3-208ENST00000486404 MYO5BQ9ULV0 1848 aa19.55■□□□□ 0.72
CHMP3-208ENST00000486404 ZNF335Q9H4Z2 1342 aaPredicted RBP19.55■□□□□ 0.72
CHMP3-208ENST00000486404 MED14O60244 1454 aa19.55■□□□□ 0.72
CHMP3-208ENST00000486404 IQSEC2Q5JU85 1478 aa19.55■□□□□ 0.72
CHMP3-208ENST00000486404 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
CHMP3-208ENST00000486404 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
CHMP3-208ENST00000486404 ARHGAP23Q9P227 1491 aa19.53■□□□□ 0.72
CHMP3-208ENST00000486404 NUP155O75694 1391 aa19.52■□□□□ 0.72
CHMP3-208ENST00000486404 SPHKAPQ2M3C7 1700 aa19.51■□□□□ 0.71
CHMP3-208ENST00000486404 CPS1P31327 1500 aa19.51■□□□□ 0.71
CHMP3-208ENST00000486404 NAIPQ13075 1403 aa19.49■□□□□ 0.71
CHMP3-208ENST00000486404 EID1Q9Y6B2 187 aa19.48■□□□□ 0.71
CHMP3-208ENST00000486404 TMEM2Q9UHN6 1383 aa19.47■□□□□ 0.71
CHMP3-208ENST00000486404 SLC52A1Q9NWF4 448 aa19.47■□□□□ 0.71
CHMP3-208ENST00000486404 HFM1A2PYH4 1435 aa19.47■□□□□ 0.71
CHMP3-208ENST00000486404 IDI1Q13907 227 aa19.46■□□□□ 0.71
CHMP3-208ENST00000486404 TMEM131LA2VDJ0 1609 aa19.46■□□□□ 0.71
CHMP3-208ENST00000486404 TXNDC2Q86VQ3 553 aa19.44■□□□□ 0.7
CHMP3-208ENST00000486404 STRCP1A6NGW2 1772 aa19.44■□□□□ 0.7
CHMP3-208ENST00000486404 LTKP29376 864 aa19.4■□□□□ 0.7
CHMP3-208ENST00000486404 CHGAP10645 457 aaKnown RBP19.39■□□□□ 0.69
CHMP3-208ENST00000486404 KIF1BO60333 1816 aa19.38■□□□□ 0.69
CHMP3-208ENST00000486404 TRPM2O94759 1503 aa19.37■□□□□ 0.69
CHMP3-208ENST00000486404 RIMS2Q9UQ26 1411 aa19.37■□□□□ 0.69
CHMP3-208ENST00000486404 CLTCL1P53675 1640 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms