RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 TNRQ92752 1358 aa21.48■■□□□ 1.03
SCAF4-206ENST00000485790 ANKLE2Q86XL3 938 aa21.47■■□□□ 1.03
SCAF4-206ENST00000485790 CLTCQ00610 1675 aaKnown RBP21.47■■□□□ 1.03
SCAF4-206ENST00000485790 MYOM3Q5VTT5 1437 aa21.46■■□□□ 1.03
SCAF4-206ENST00000485790 PLA2R1Q13018 1463 aa21.45■■□□□ 1.02
SCAF4-206ENST00000485790 ARHGEF5Q12774 1597 aa21.44■■□□□ 1.02
SCAF4-206ENST00000485790 ZNF335Q9H4Z2 1342 aaPredicted RBP21.43■■□□□ 1.02
SCAF4-206ENST00000485790 A2ML1A8K2U0 1454 aa21.43■■□□□ 1.02
SCAF4-206ENST00000485790 FAM135AQ9P2D6 1515 aa21.4■■□□□ 1.02
SCAF4-206ENST00000485790 UBAP1LF5GYI3 381 aa21.4■■□□□ 1.02
SCAF4-206ENST00000485790 RRP7BPQ9NSQ0 103 aa21.4■■□□□ 1.02
SCAF4-206ENST00000485790 KDM5DQ9BY66 1539 aa21.39■■□□□ 1.02
SCAF4-206ENST00000485790 PZPP20742 1482 aa21.39■■□□□ 1.02
SCAF4-206ENST00000485790 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.01
SCAF4-206ENST00000485790 TCOF1Q13428 1488 aaKnown RBP21.38■■□□□ 1.01
SCAF4-206ENST00000485790 IQSEC2Q5JU85 1478 aa21.38■■□□□ 1.01
SCAF4-206ENST00000485790 LTBP4Q8N2S1 1624 aa21.36■■□□□ 1.01
SCAF4-206ENST00000485790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■■■□□ 16.6
SCAF4-206ENST00000485790 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.35■■□□□ 1.01
SCAF4-206ENST00000485790 NLRP1Q9C000 1473 aa21.34■■□□□ 1.01
SCAF4-206ENST00000485790 MYO3AQ8NEV4 1616 aa21.33■■□□□ 1.01
SCAF4-206ENST00000485790 KIF15Q9NS87 1388 aa21.32■■□□□ 1
SCAF4-206ENST00000485790 CHIC2Q9UKJ5 165 aa21.31■■□□□ 1
SCAF4-206ENST00000485790 MAST1Q9Y2H9 1570 aa21.31■■□□□ 1
SCAF4-206ENST00000485790 TOM1O60784 492 aa21.3■■□□□ 1
SCAF4-206ENST00000485790 KANK1Q14678 1352 aa21.3■■□□□ 1
SCAF4-206ENST00000485790 ABCC5O15440 1437 aa21.29■■□□□ 1
SCAF4-206ENST00000485790 DNMT1P26358 1616 aaKnown RBP21.29■■□□□ 1
SCAF4-206ENST00000485790 DUOX2Q9NRD8 1548 aa21.29■■□□□ 1
SCAF4-206ENST00000485790 ZNF142P52746 1687 aaPredicted RBP21.28■■□□□ 1
SCAF4-206ENST00000485790 ANKRD30AQ9BXX3 1397 aa21.28■■□□□ 1
SCAF4-206ENST00000485790 DISP3Q9P2K9 1392 aa21.28■■□□□ 1
SCAF4-206ENST00000485790 FAM50AQ14320 339 aaKnown RBP21.27■■□□□ 1
SCAF4-206ENST00000485790 STAG3Q9UJ98 1225 aa21.27■■□□□ 1
SCAF4-206ENST00000485790 EID1Q9Y6B2 187 aa21.26■□□□□ 0.99
SCAF4-206ENST00000485790 UGGT1Q9NYU2 1555 aa21.26■□□□□ 0.99
SCAF4-206ENST00000485790 FGD6Q6ZV73 1430 aa21.25■□□□□ 0.99
SCAF4-206ENST00000485790 ABCC3O15438 1527 aa21.24■□□□□ 0.99
SCAF4-206ENST00000485790 TXNDC2Q86VQ3 553 aa21.24■□□□□ 0.99
SCAF4-206ENST00000485790 NPHP4O75161 1426 aaPredicted RBP21.23■□□□□ 0.99
SCAF4-206ENST00000485790 DAPK1P53355 1430 aa21.23■□□□□ 0.99
SCAF4-206ENST00000485790 ERBINQ96RT1 1412 aa21.23■□□□□ 0.99
SCAF4-206ENST00000485790 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
SCAF4-206ENST00000485790 SHANK2Q9UPX8 1470 aa21.22■□□□□ 0.99
SCAF4-206ENST00000485790 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
SCAF4-206ENST00000485790 ARHGAP31Q2M1Z3 1444 aa21.2■□□□□ 0.98
SCAF4-206ENST00000485790 ERVK-7P63135 1459 aa21.2■□□□□ 0.98
SCAF4-206ENST00000485790 RNF17Q9BXT8 1623 aaKnown RBP21.19■□□□□ 0.98
SCAF4-206ENST00000485790 EIF2AK4Q9P2K8 1649 aaKnown RBP21.19■□□□□ 0.98
SCAF4-206ENST00000485790 MED14O60244 1454 aa21.19■□□□□ 0.98
SCAF4-206ENST00000485790 PTPN23Q9H3S7 1636 aa21.18■□□□□ 0.98
SCAF4-206ENST00000485790 CPS1P31327 1500 aa21.17■□□□□ 0.98
SCAF4-206ENST00000485790 SPATA31D1Q6ZQQ2 1576 aa21.16■□□□□ 0.98
SCAF4-206ENST00000485790 LTKP29376 864 aa21.14■□□□□ 0.97
SCAF4-206ENST00000485790 IDI1Q13907 227 aa21.14■□□□□ 0.97
SCAF4-206ENST00000485790 SLC52A1Q9NWF4 448 aa21.14■□□□□ 0.97
SCAF4-206ENST00000485790 ZC3H13Q5T200 1668 aaKnown RBP21.14■□□□□ 0.97
SCAF4-206ENST00000485790 HDGFP51858 240 aaKnown RBP21.12■□□□□ 0.97
SCAF4-206ENST00000485790 HSPA1LP34931 641 aa21.1■□□□□ 0.97
SCAF4-206ENST00000485790 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
SCAF4-206ENST00000485790 DEPDC5O75140 1603 aa21.09■□□□□ 0.97
SCAF4-206ENST00000485790 ILDR2Q71H61 639 aa21.09■□□□□ 0.97
SCAF4-206ENST00000485790 BCANQ96GW7 911 aa21.09■□□□□ 0.97
SCAF4-206ENST00000485790 MROH1Q8NDA8 1641 aa21.08■□□□□ 0.97
SCAF4-206ENST00000485790 TMEM2Q9UHN6 1383 aa21.08■□□□□ 0.96
SCAF4-206ENST00000485790 SCAF11Q99590 1463 aaKnown RBP21.07■□□□□ 0.96
SCAF4-206ENST00000485790 ANKRD50Q9ULJ7 1429 aa21.07■□□□□ 0.96
SCAF4-206ENST00000485790 PRDM15P57071 1507 aaPredicted RBP21.07■□□□□ 0.96
SCAF4-206ENST00000485790 SOCS7O14512 581 aa21.06■□□□□ 0.96
SCAF4-206ENST00000485790 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
SCAF4-206ENST00000485790 VWDEQ8N2E2 1590 aa21.03■□□□□ 0.96
SCAF4-206ENST00000485790 ADGRL2O95490 1459 aa21.03■□□□□ 0.96
SCAF4-206ENST00000485790 LMTK2Q8IWU2 1503 aa21.02■□□□□ 0.96
SCAF4-206ENST00000485790 ARHGAP23Q9P227 1491 aa21.01■□□□□ 0.95
SCAF4-206ENST00000485790 SLIT1O75093 1534 aa21.01■□□□□ 0.95
SCAF4-206ENST00000485790 KCNA6P17658 529 aa21.01■□□□□ 0.95
SCAF4-206ENST00000485790 ITGAEP38570 1179 aa21.01■□□□□ 0.95
SCAF4-206ENST00000485790 SLC26A8Q96RN1 970 aa21.01■□□□□ 0.95
SCAF4-206ENST00000485790 CEP152O94986 1710 aa20.99■□□□□ 0.95
SCAF4-206ENST00000485790 PPP1R15AO75807 674 aaPredicted RBP20.99■□□□□ 0.95
SCAF4-206ENST00000485790 CROCC2H7BZ55 1655 aa20.99■□□□□ 0.95
SCAF4-206ENST00000485790 IQGAP1P46940 1657 aa20.99■□□□□ 0.95
SCAF4-206ENST00000485790 LRRC7Q96NW7 1537 aa20.99■□□□□ 0.95
SCAF4-206ENST00000485790 PROSER2Q86WR7 435 aaPredicted RBP20.98■□□□□ 0.95
SCAF4-206ENST00000485790 NOS1P29475 1434 aa20.97■□□□□ 0.95
SCAF4-206ENST00000485790 CHGAP10645 457 aaKnown RBP20.97■□□□□ 0.95
SCAF4-206ENST00000485790 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.97■□□□□ 0.95
SCAF4-206ENST00000485790 ROCK1Q13464 1354 aa20.97■□□□□ 0.95
SCAF4-206ENST00000485790 PPARGC1BQ86YN6 1023 aaKnown RBP20.96■□□□□ 0.95
SCAF4-206ENST00000485790 EFCAB6Q5THR3 1501 aa20.95■□□□□ 0.94
SCAF4-206ENST00000485790 SENP3Q9H4L4 574 aaPredicted RBP20.95■□□□□ 0.94
SCAF4-206ENST00000485790 CFAP65Q6ZU64 1925 aaKnown RBP20.95■□□□□ 0.94
SCAF4-206ENST00000485790 UBR1Q8IWV7 1749 aa20.95■□□□□ 0.94
SCAF4-206ENST00000485790 RPRD2Q5VT52 1461 aaKnown RBP20.94■□□□□ 0.94
SCAF4-206ENST00000485790 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
SCAF4-206ENST00000485790 NUP155O75694 1391 aa20.91■□□□□ 0.94
SCAF4-206ENST00000485790 PIK3C2BO00750 1634 aa20.89■□□□□ 0.94
SCAF4-206ENST00000485790 TBX22Q9Y458 520 aa20.89■□□□□ 0.93
SCAF4-206ENST00000485790 TMEM94Q12767 1356 aa20.88■□□□□ 0.93
SCAF4-206ENST00000485790 RBM33Q96EV2 1170 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms