RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 HDGFL2Q7Z4V5 671 aaPredicted RBP18.99■□□□□ 0.63
RXRA-203ENST00000484822 MORC1Q86VD1 984 aa18.99■□□□□ 0.63
RXRA-203ENST00000484822 SYAP1Q96A49 352 aaPredicted RBP18.99■□□□□ 0.63
RXRA-203ENST00000484822 CFAP44Q96MT7 982 aa18.99■□□□□ 0.63
RXRA-203ENST00000484822 EID1Q9Y6B2 187 aa18.99■□□□□ 0.63
RXRA-203ENST00000484822 CUX1P39880 1505 aa18.99■□□□□ 0.63
RXRA-203ENST00000484822 ITPRIPQ8IWB1 547 aa18.98■□□□□ 0.63
RXRA-203ENST00000484822 CASKIN1Q8WXD9 1431 aa18.98■□□□□ 0.63
RXRA-203ENST00000484822 PDE4AP27815 886 aa18.97■□□□□ 0.63
RXRA-203ENST00000484822 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
RXRA-203ENST00000484822 FANCIQ9NVI1 1328 aa18.95■□□□□ 0.62
RXRA-203ENST00000484822 CCDC144AA2RUR9 1427 aa18.94■□□□□ 0.62
RXRA-203ENST00000484822 IPO8O15397 1037 aaKnown RBP18.94■□□□□ 0.62
RXRA-203ENST00000484822 DHX57Q6P158 1386 aaKnown RBP18.93■□□□□ 0.62
RXRA-203ENST00000484822 FGD6Q6ZV73 1430 aa18.93■□□□□ 0.62
RXRA-203ENST00000484822 CLUAP1Q96AJ1 413 aa18.93■□□□□ 0.62
RXRA-203ENST00000484822 KIAA1211Q6ZU35 1233 aa18.93■□□□□ 0.62
RXRA-203ENST00000484822 PMFBP1Q8TBY8 1022 aa18.92■□□□□ 0.62
RXRA-203ENST00000484822 PRXQ9BXM0 1461 aa18.92■□□□□ 0.62
RXRA-203ENST00000484822 RALBP1Q15311 655 aa18.91■□□□□ 0.62
RXRA-203ENST00000484822 UACAQ9BZF9 1416 aa18.91■□□□□ 0.62
RXRA-203ENST00000484822 TMX4Q9H1E5 349 aaPredicted RBP18.91■□□□□ 0.62
RXRA-203ENST00000484822 LRRC9Q6ZRR7 1453 aa18.91■□□□□ 0.62
RXRA-203ENST00000484822 GOLGA2Q08379 1002 aa18.91■□□□□ 0.62
RXRA-203ENST00000484822 LAMC3Q9Y6N6 1575 aa18.91■□□□□ 0.62
RXRA-203ENST00000484822 EFCAB5A4FU69 1503 aa18.9■□□□□ 0.62
RXRA-203ENST00000484822 PRG4Q92954 1404 aaPredicted RBP18.89■□□□□ 0.61
RXRA-203ENST00000484822 PRDM2Q13029 1718 aa18.89■□□□□ 0.61
RXRA-203ENST00000484822 NOL8Q76FK4 1167 aaKnown RBP18.89■□□□□ 0.61
RXRA-203ENST00000484822 FYCO1Q9BQS8 1478 aa18.89■□□□□ 0.61
RXRA-203ENST00000484822 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
RXRA-203ENST00000484822 SYNJ2O15056 1496 aa18.88■□□□□ 0.61
RXRA-203ENST00000484822 GNL2Q13823 731 aaKnown RBP18.87■□□□□ 0.61
RXRA-203ENST00000484822 FOXD4L5Q5VV16 416 aaPredicted RBP18.87■□□□□ 0.61
RXRA-203ENST00000484822 FOXD4L4Q8WXT5 416 aaPredicted RBP18.87■□□□□ 0.61
RXRA-203ENST00000484822 U2AF1L5P0DN76 240 aaPredicted RBP18.87■□□□□ 0.61
RXRA-203ENST00000484822 U2AF1Q01081 240 aaKnown RBP eCLIP18.87■□□□□ 0.61
RXRA-203ENST00000484822 DDX11L8A8MPP1 907 aa18.87■□□□□ 0.61
RXRA-203ENST00000484822 SOX12O15370 315 aa18.87■□□□□ 0.61
RXRA-203ENST00000484822 FAM69CQ0P6D2 419 aa18.85■□□□□ 0.61
RXRA-203ENST00000484822 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
RXRA-203ENST00000484822 FAM161AQ3B820 660 aa18.85■□□□□ 0.61
RXRA-203ENST00000484822 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
RXRA-203ENST00000484822 EXOC6Q8TAG9 804 aa18.84■□□□□ 0.61
RXRA-203ENST00000484822 TERF2IPQ9NYB0 399 aa18.84■□□□□ 0.61
RXRA-203ENST00000484822 NCOA2Q15596 1464 aa18.84■□□□□ 0.61
RXRA-203ENST00000484822 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
RXRA-203ENST00000484822 PHLDB1Q86UU1 1377 aa18.83■□□□□ 0.61
RXRA-203ENST00000484822 CSB-PGBD3P0DP91 1061 aa18.83■□□□□ 0.61
RXRA-203ENST00000484822 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.6
RXRA-203ENST00000484822 PLIN1O60240 522 aa18.83■□□□□ 0.6
RXRA-203ENST00000484822 SMC4Q9NTJ3 1288 aa18.83■□□□□ 0.6
RXRA-203ENST00000484822 FAM13BQ9NYF5 915 aa18.82■□□□□ 0.6
RXRA-203ENST00000484822 KIF15Q9NS87 1388 aa18.82■□□□□ 0.6
RXRA-203ENST00000484822 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
RXRA-203ENST00000484822 PDE3BQ13370 1112 aa18.82■□□□□ 0.6
RXRA-203ENST00000484822 CCDC146Q8IYE0 955 aa18.82■□□□□ 0.6
RXRA-203ENST00000484822 PEG3Q9GZU2 1588 aa18.82■□□□□ 0.6
RXRA-203ENST00000484822 CCDC9Q9Y3X0 531 aaKnown RBP18.82■□□□□ 0.6
RXRA-203ENST00000484822 ZNF644Q9H582 1327 aaPredicted RBP18.81■□□□□ 0.6
RXRA-203ENST00000484822 ABCA10Q8WWZ4 1543 aa18.81■□□□□ 0.6
RXRA-203ENST00000484822 GOLGA6L1Q8N7Z2 621 aa18.8■□□□□ 0.6
RXRA-203ENST00000484822 NLRP13Q86W25 1043 aa18.79■□□□□ 0.6
RXRA-203ENST00000484822 CENPJQ9HC77 1338 aaPredicted RBP18.79■□□□□ 0.6
RXRA-203ENST00000484822 NUTM2DQ5VT03 806 aaPredicted RBP18.79■□□□□ 0.6
RXRA-203ENST00000484822 TRIM6-TRIM34B2RNG4 842 aa18.78■□□□□ 0.6
RXRA-203ENST00000484822 CENPQQ7L2Z9 268 aaPredicted RBP18.78■□□□□ 0.6
RXRA-203ENST00000484822 RTF1Q92541 710 aaKnown RBP18.78■□□□□ 0.6
RXRA-203ENST00000484822 NOC3LQ8WTT2 800 aaKnown RBP18.77■□□□□ 0.6
RXRA-203ENST00000484822 TPM4P67936 248 aa18.77■□□□□ 0.6
RXRA-203ENST00000484822 PHF14O94880 888 aa18.77■□□□□ 0.59
RXRA-203ENST00000484822 PAK3O75914 559 aaPredicted RBP18.77■□□□□ 0.59
RXRA-203ENST00000484822 ANO8Q9HCE9 1232 aaPredicted RBP18.76■□□□□ 0.59
RXRA-203ENST00000484822 FOXD4L6Q3SYB3 417 aaPredicted RBP18.76■□□□□ 0.59
RXRA-203ENST00000484822 FOXD4L3Q6VB84 417 aaPredicted RBP18.76■□□□□ 0.59
RXRA-203ENST00000484822 ZNF771Q7L3S4 317 aaPredicted RBP18.76■□□□□ 0.59
RXRA-203ENST00000484822 ST18O60284 1047 aa18.75■□□□□ 0.59
RXRA-203ENST00000484822 TRAK1Q9UPV9 953 aa18.75■□□□□ 0.59
RXRA-203ENST00000484822 ANKRD50Q9ULJ7 1429 aa18.75■□□□□ 0.59
RXRA-203ENST00000484822 HSP90B1P14625 803 aaKnown RBP18.75■□□□□ 0.59
RXRA-203ENST00000484822 RRP1P56182 461 aaKnown RBP18.75■□□□□ 0.59
RXRA-203ENST00000484822 STAC3Q96MF2 364 aa18.74■□□□□ 0.59
RXRA-203ENST00000484822 ARHGAP5Q13017 1502 aa18.74■□□□□ 0.59
RXRA-203ENST00000484822 CRBNQ96SW2 442 aa18.74■□□□□ 0.59
RXRA-203ENST00000484822 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
RXRA-203ENST00000484822 CSPP1Q1MSJ5 1256 aa18.73■□□□□ 0.59
RXRA-203ENST00000484822 SKOR2Q2VWA4 1001 aaPredicted RBP18.73■□□□□ 0.59
RXRA-203ENST00000484822 ST20-MTHFSA0A0A6YYL1 179 aa18.73■□□□□ 0.59
RXRA-203ENST00000484822 CLSTN1O94985 981 aa18.72■□□□□ 0.59
RXRA-203ENST00000484822 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
RXRA-203ENST00000484822 EHBP1L1Q8N3D4 1523 aa18.71■□□□□ 0.59
RXRA-203ENST00000484822 NGDNQ8NEJ9 315 aaKnown RBP18.7■□□□□ 0.58
RXRA-203ENST00000484822 ZBED9Q6R2W3 1325 aa18.7■□□□□ 0.58
RXRA-203ENST00000484822 FAM43AQ8N2R8 423 aa18.7■□□□□ 0.58
RXRA-203ENST00000484822 BCL2L13Q9BXK5 485 aa18.7■□□□□ 0.58
RXRA-203ENST00000484822 TROQ12816 1431 aaPredicted RBP18.7■□□□□ 0.58
RXRA-203ENST00000484822 PRKRIP1Q9H875 184 aaPredicted RBP18.69■□□□□ 0.58
RXRA-203ENST00000484822 NFKBIBQ15653 356 aa18.69■□□□□ 0.58
RXRA-203ENST00000484822 HECW1Q76N89 1606 aa18.68■□□□□ 0.58
RXRA-203ENST00000484822 MIA2Q96PC5 1412 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms