RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 EIF2AK4Q9P2K8 1649 aaKnown RBP19.98■□□□□ 0.79
HDAC1-209ENST00000484305 KDM5DQ9BY66 1539 aa19.98■□□□□ 0.79
HDAC1-209ENST00000484305 DUOX2Q9NRD8 1548 aa19.98■□□□□ 0.79
HDAC1-209ENST00000484305 FAM50AQ14320 339 aaKnown RBP19.97■□□□□ 0.79
HDAC1-209ENST00000484305 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
HDAC1-209ENST00000484305 RRP7BPQ9NSQ0 103 aa19.97■□□□□ 0.79
HDAC1-209ENST00000484305 WASHC2CQ9Y4E1 1318 aa19.97■□□□□ 0.79
HDAC1-209ENST00000484305 FAM135AQ9P2D6 1515 aa19.97■□□□□ 0.79
HDAC1-209ENST00000484305 KIF15Q9NS87 1388 aa19.96■□□□□ 0.79
HDAC1-209ENST00000484305 CHIC2Q9UKJ5 165 aa19.96■□□□□ 0.79
HDAC1-209ENST00000484305 STRCQ7RTU9 1775 aa19.95■□□□□ 0.78
HDAC1-209ENST00000484305 MROH1Q8NDA8 1641 aa19.94■□□□□ 0.78
HDAC1-209ENST00000484305 MYO3AQ8NEV4 1616 aa19.93■□□□□ 0.78
HDAC1-209ENST00000484305 FBXO31Q5XUX0 539 aaPredicted RBP19.92■□□□□ 0.78
HDAC1-209ENST00000484305 ANKRD30AQ9BXX3 1397 aa19.91■□□□□ 0.78
HDAC1-209ENST00000484305 NCOA1Q15788 1441 aa19.91■□□□□ 0.78
HDAC1-209ENST00000484305 ERBINQ96RT1 1412 aa19.91■□□□□ 0.78
HDAC1-209ENST00000484305 PZPP20742 1482 aa19.91■□□□□ 0.78
HDAC1-209ENST00000484305 ABCC3O15438 1527 aa19.9■□□□□ 0.78
HDAC1-209ENST00000484305 ZNF142P52746 1687 aaPredicted RBP19.9■□□□□ 0.78
HDAC1-209ENST00000484305 ZC3H13Q5T200 1668 aaKnown RBP19.9■□□□□ 0.78
HDAC1-209ENST00000484305 CEP152O94986 1710 aa19.9■□□□□ 0.78
HDAC1-209ENST00000484305 CEP170BQ9Y4F5 1589 aaPredicted RBP19.88■□□□□ 0.77
HDAC1-209ENST00000484305 ADGRL2O95490 1459 aa19.87■□□□□ 0.77
HDAC1-209ENST00000484305 CAMSAP1Q5T5Y3 1602 aa19.87■□□□□ 0.77
HDAC1-209ENST00000484305 PRDM15P57071 1507 aaPredicted RBP19.86■□□□□ 0.77
HDAC1-209ENST00000484305 TNRQ92752 1358 aa19.85■□□□□ 0.77
HDAC1-209ENST00000484305 DEPDC5O75140 1603 aa19.85■□□□□ 0.77
HDAC1-209ENST00000484305 CFAP65Q6ZU64 1925 aaKnown RBP19.85■□□□□ 0.77
HDAC1-209ENST00000484305 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
HDAC1-209ENST00000484305 ILDR1Q86SU0 546 aaPredicted RBP19.83■□□□□ 0.77
HDAC1-209ENST00000484305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.83■□□□□ 0.777e-7■■□□□ 12.9
HDAC1-209ENST00000484305 A2ML1A8K2U0 1454 aa19.83■□□□□ 0.76
HDAC1-209ENST00000484305 NCKAP5LQ9HCH0 1330 aa19.79■□□□□ 0.76
HDAC1-209ENST00000484305 SPATA31D1Q6ZQQ2 1576 aa19.79■□□□□ 0.76
HDAC1-209ENST00000484305 PTPRTO14522 1441 aa19.79■□□□□ 0.76
HDAC1-209ENST00000484305 KANK1Q14678 1352 aa19.78■□□□□ 0.76
HDAC1-209ENST00000484305 ERVK-7P63135 1459 aa19.78■□□□□ 0.76
HDAC1-209ENST00000484305 PLA2R1Q13018 1463 aa19.78■□□□□ 0.76
HDAC1-209ENST00000484305 ANKRD50Q9ULJ7 1429 aa19.77■□□□□ 0.76
HDAC1-209ENST00000484305 ITGAEP38570 1179 aa19.77■□□□□ 0.76
HDAC1-209ENST00000484305 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.77■□□□□ 0.76
HDAC1-209ENST00000484305 VWDEQ8N2E2 1590 aa19.77■□□□□ 0.76
HDAC1-209ENST00000484305 NLRP1Q9C000 1473 aa19.76■□□□□ 0.75
HDAC1-209ENST00000484305 ARHGAP31Q2M1Z3 1444 aa19.76■□□□□ 0.75
HDAC1-209ENST00000484305 ROCK1Q13464 1354 aa19.74■□□□□ 0.75
HDAC1-209ENST00000484305 UGGT1Q9NYU2 1555 aa19.74■□□□□ 0.75
HDAC1-209ENST00000484305 LMTK2Q8IWU2 1503 aa19.73■□□□□ 0.75
HDAC1-209ENST00000484305 PKD2Q13563 968 aa19.73■□□□□ 0.75
HDAC1-209ENST00000484305 RRBP1Q9P2E9 1410 aaKnown RBP19.72■□□□□ 0.75
HDAC1-209ENST00000484305 CERKQ8TCT0 537 aa19.71■□□□□ 0.75
HDAC1-209ENST00000484305 SENP3Q9H4L4 574 aaPredicted RBP19.71■□□□□ 0.75
HDAC1-209ENST00000484305 POLR1AO95602 1720 aaPredicted RBP19.71■□□□□ 0.75
HDAC1-209ENST00000484305 THEMISQ8N1K5 641 aaPredicted RBP19.7■□□□□ 0.74
HDAC1-209ENST00000484305 FBXO41Q8TF61 875 aa19.7■□□□□ 0.74
HDAC1-209ENST00000484305 EFCAB6Q5THR3 1501 aa19.68■□□□□ 0.74
HDAC1-209ENST00000484305 UNC13BO14795 1591 aa19.68■□□□□ 0.74
HDAC1-209ENST00000484305 NEURL4Q96JN8 1562 aa19.67■□□□□ 0.74
HDAC1-209ENST00000484305 UBR1Q8IWV7 1749 aa19.67■□□□□ 0.74
HDAC1-209ENST00000484305 LTBP4Q8N2S1 1624 aa19.66■□□□□ 0.74
HDAC1-209ENST00000484305 ANKLE2Q86XL3 938 aa19.65■□□□□ 0.74
HDAC1-209ENST00000484305 PHF23Q9BUL5 403 aaPredicted RBP19.64■□□□□ 0.73
HDAC1-209ENST00000484305 TET3O43151 1660 aa19.64■□□□□ 0.73
HDAC1-209ENST00000484305 PIK3C2BO00750 1634 aa19.63■□□□□ 0.73
HDAC1-209ENST00000484305 SYNMO15061 1565 aa19.63■□□□□ 0.73
HDAC1-209ENST00000484305 GCC2Q8IWJ2 1684 aa19.62■□□□□ 0.73
HDAC1-209ENST00000484305 ZNF335Q9H4Z2 1342 aaPredicted RBP19.62■□□□□ 0.73
HDAC1-209ENST00000484305 NOS1P29475 1434 aa19.61■□□□□ 0.73
HDAC1-209ENST00000484305 IDI1Q13907 227 aa19.6■□□□□ 0.73
HDAC1-209ENST00000484305 IQGAP3Q86VI3 1631 aa19.6■□□□□ 0.73
HDAC1-209ENST00000484305 RPRD2Q5VT52 1461 aaKnown RBP19.6■□□□□ 0.73
HDAC1-209ENST00000484305 MED14O60244 1454 aa19.59■□□□□ 0.73
HDAC1-209ENST00000484305 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
HDAC1-209ENST00000484305 NUP155O75694 1391 aa19.58■□□□□ 0.73
HDAC1-209ENST00000484305 E9PCH4 1651 aa19.58■□□□□ 0.72
HDAC1-209ENST00000484305 IQGAP1P46940 1657 aa19.57■□□□□ 0.72
HDAC1-209ENST00000484305 SLIT1O75093 1534 aa19.56■□□□□ 0.72
HDAC1-209ENST00000484305 KDM5AP29375 1690 aaKnown RBP19.56■□□□□ 0.72
HDAC1-209ENST00000484305 ARHGAP23Q9P227 1491 aa19.56■□□□□ 0.72
HDAC1-209ENST00000484305 STAG3Q9UJ98 1225 aa19.56■□□□□ 0.72
HDAC1-209ENST00000484305 NAIPQ13075 1403 aa19.55■□□□□ 0.72
HDAC1-209ENST00000484305 LTKP29376 864 aa19.54■□□□□ 0.72
HDAC1-209ENST00000484305 SLC52A1Q9NWF4 448 aa19.54■□□□□ 0.72
HDAC1-209ENST00000484305 SCAF11Q99590 1463 aaKnown RBP19.54■□□□□ 0.72
HDAC1-209ENST00000484305 TXNDC2Q86VQ3 553 aa19.53■□□□□ 0.72
HDAC1-209ENST00000484305 TMEM2Q9UHN6 1383 aa19.52■□□□□ 0.72
HDAC1-209ENST00000484305 ADGRB3O60242 1522 aa19.51■□□□□ 0.71
HDAC1-209ENST00000484305 MYO5BQ9ULV0 1848 aa19.51■□□□□ 0.71
HDAC1-209ENST00000484305 IQSEC2Q5JU85 1478 aa19.51■□□□□ 0.71
HDAC1-209ENST00000484305 EID1Q9Y6B2 187 aa19.5■□□□□ 0.71
HDAC1-209ENST00000484305 HFM1A2PYH4 1435 aa19.5■□□□□ 0.71
HDAC1-209ENST00000484305 TMEM131LA2VDJ0 1609 aa19.47■□□□□ 0.71
HDAC1-209ENST00000484305 STRCP1A6NGW2 1772 aa19.47■□□□□ 0.71
HDAC1-209ENST00000484305 CPS1P31327 1500 aa19.46■□□□□ 0.71
HDAC1-209ENST00000484305 SPHKAPQ2M3C7 1700 aa19.44■□□□□ 0.7
HDAC1-209ENST00000484305 CHGAP10645 457 aaKnown RBP19.42■□□□□ 0.7
HDAC1-209ENST00000484305 TRIM52Q96A61 297 aa19.41■□□□□ 0.7
HDAC1-209ENST00000484305 ZFYVE9O95405 1425 aa19.41■□□□□ 0.7
HDAC1-209ENST00000484305 RIMS2Q9UQ26 1411 aa19.39■□□□□ 0.69
HDAC1-209ENST00000484305 UBAP1LF5GYI3 381 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms