RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SPAG9O60271 1321 aaKnown RBP10.69□□□□□ -0.7
BRCA1-216ENST00000484087 CCDC141Q6ZP82 1450 aa10.68□□□□□ -0.7
BRCA1-216ENST00000484087 PTPN23Q9H3S7 1636 aa10.68□□□□□ -0.7
BRCA1-216ENST00000484087 CROCC2H7BZ55 1655 aa10.68□□□□□ -0.7
BRCA1-216ENST00000484087 SP7Q8TDD2 431 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-216ENST00000484087 C3P01024 1663 aa10.67□□□□□ -0.7
BRCA1-216ENST00000484087 CLTCQ00610 1675 aaKnown RBP10.67□□□□□ -0.7
BRCA1-216ENST00000484087 ARHGEF5Q12774 1597 aa10.66□□□□□ -0.7
BRCA1-216ENST00000484087 CEBPAP49715 358 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-216ENST00000484087 A2MP01023 1474 aa10.66□□□□□ -0.7
BRCA1-216ENST00000484087 AGLP35573 1532 aa10.65□□□□□ -0.7
BRCA1-216ENST00000484087 FGD6Q6ZV73 1430 aa10.63□□□□□ -0.71
BRCA1-216ENST00000484087 LMTK3Q96Q04 1460 aa10.63□□□□□ -0.71
BRCA1-216ENST00000484087 MYCNP04198 464 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-216ENST00000484087 DNMT1P26358 1616 aaKnown RBP10.62□□□□□ -0.71
BRCA1-216ENST00000484087 MAST1Q9Y2H9 1570 aa10.62□□□□□ -0.71
BRCA1-216ENST00000484087 MIA2Q96PC5 1412 aa10.61□□□□□ -0.71
BRCA1-216ENST00000484087 PREX1Q8TCU6 1659 aa10.61□□□□□ -0.71
BRCA1-216ENST00000484087 HSPA2P54652 639 aa10.6□□□□□ -0.71
BRCA1-216ENST00000484087 GGT6Q6P531 493 aa10.6□□□□□ -0.71
BRCA1-216ENST00000484087 RTEL1-TNFRSF6BF6WH68 1400 aa10.6□□□□□ -0.71
BRCA1-216ENST00000484087 ABCC5O15440 1437 aa10.6□□□□□ -0.71
BRCA1-216ENST00000484087 TCOF1Q13428 1488 aaKnown RBP10.6□□□□□ -0.71
BRCA1-216ENST00000484087 DAPK1P53355 1430 aa10.59□□□□□ -0.71
BRCA1-216ENST00000484087 MROH2AA6NES4 1674 aa10.59□□□□□ -0.71
BRCA1-216ENST00000484087 CEP152O94986 1710 aa10.59□□□□□ -0.71
BRCA1-216ENST00000484087 POLA2Q14181 598 aa10.58□□□□□ -0.72
BRCA1-216ENST00000484087 MROH1Q8NDA8 1641 aa10.58□□□□□ -0.72
BRCA1-216ENST00000484087 ZBTB22O15209 634 aa10.57□□□□□ -0.72
BRCA1-216ENST00000484087 CHIC2Q9UKJ5 165 aa10.57□□□□□ -0.72
BRCA1-216ENST00000484087 DHX29Q7Z478 1369 aaKnown RBP10.56□□□□□ -0.72
BRCA1-216ENST00000484087 FAM50AQ14320 339 aaKnown RBP10.56□□□□□ -0.72
BRCA1-216ENST00000484087 RNF17Q9BXT8 1623 aaKnown RBP10.56□□□□□ -0.72
BRCA1-216ENST00000484087 KIF3BO15066 747 aa10.55□□□□□ -0.72
BRCA1-216ENST00000484087 TSPY4P0CV99 314 aa10.55□□□□□ -0.72
BRCA1-216ENST00000484087 TSPY10P0CW01 314 aa10.55□□□□□ -0.72
BRCA1-216ENST00000484087 MYO3AQ8NEV4 1616 aa10.55□□□□□ -0.72
BRCA1-216ENST00000484087 SHANK2Q9UPX8 1470 aa10.55□□□□□ -0.72
BRCA1-216ENST00000484087 EIF2AK4Q9P2K8 1649 aaKnown RBP10.55□□□□□ -0.72
BRCA1-216ENST00000484087 CFAP65Q6ZU64 1925 aaKnown RBP10.54□□□□□ -0.72
BRCA1-216ENST00000484087 ESF1Q9H501 851 aaKnown RBP10.54□□□□□ -0.72
BRCA1-216ENST00000484087 RRP7BPQ9NSQ0 103 aa10.54□□□□□ -0.72
BRCA1-216ENST00000484087 KDM5DQ9BY66 1539 aa10.54□□□□□ -0.72
BRCA1-216ENST00000484087 PTPRKQ15262 1439 aa10.53□□□□□ -0.72
BRCA1-216ENST00000484087 KIF15Q9NS87 1388 aa10.53□□□□□ -0.72
BRCA1-216ENST00000484087 DUOX2Q9NRD8 1548 aa10.53□□□□□ -0.72
BRCA1-216ENST00000484087 STRCQ7RTU9 1775 aa10.52□□□□□ -0.72
BRCA1-216ENST00000484087 ZMYM3Q14202 1370 aa10.52□□□□□ -0.72
BRCA1-216ENST00000484087 CAMSAP1Q5T5Y3 1602 aa10.52□□□□□ -0.73
BRCA1-216ENST00000484087 CNTLNQ9NXG0 1405 aa10.52□□□□□ -0.73
BRCA1-216ENST00000484087 ABCC3O15438 1527 aa10.52□□□□□ -0.73
BRCA1-216ENST00000484087 ITGAEP38570 1179 aa10.51□□□□□ -0.73
BRCA1-216ENST00000484087 RSPH4AQ5TD94 716 aa10.51□□□□□ -0.73
BRCA1-216ENST00000484087 UHRF1BP1Q6BDS2 1440 aa10.51□□□□□ -0.73
BRCA1-216ENST00000484087 DEPDC5O75140 1603 aa10.51□□□□□ -0.73
BRCA1-216ENST00000484087 ZNF142P52746 1687 aaPredicted RBP10.5□□□□□ -0.73
BRCA1-216ENST00000484087 ZC3H13Q5T200 1668 aaKnown RBP10.5□□□□□ -0.73
BRCA1-216ENST00000484087 FBXO31Q5XUX0 539 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-216ENST00000484087 PRDM15P57071 1507 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-216ENST00000484087 CEP170BQ9Y4F5 1589 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-216ENST00000484087 SETD1BQ9UPS6 1966 aaKnown RBP10.49□□□□□ -0.73
BRCA1-216ENST00000484087 FOXD4L1Q9NU39 408 aa10.49□□□□□ -0.73
BRCA1-216ENST00000484087 ADGRL2O95490 1459 aa10.48□□□□□ -0.73
BRCA1-216ENST00000484087 NCOA1Q15788 1441 aa10.48□□□□□ -0.73
BRCA1-216ENST00000484087 ERBINQ96RT1 1412 aa10.48□□□□□ -0.73
BRCA1-216ENST00000484087 WASHC2CQ9Y4E1 1318 aa10.47□□□□□ -0.73
BRCA1-216ENST00000484087 PZPP20742 1482 aa10.47□□□□□ -0.73
BRCA1-216ENST00000484087 ANKRD30AQ9BXX3 1397 aa10.46□□□□□ -0.73
BRCA1-216ENST00000484087 NPATQ14207 1427 aa10.46□□□□□ -0.74
BRCA1-216ENST00000484087 HRCP23327 699 aa10.45□□□□□ -0.74
BRCA1-216ENST00000484087 FAM135AQ9P2D6 1515 aa10.44□□□□□ -0.74
BRCA1-216ENST00000484087 UNC13BO14795 1591 aa10.43□□□□□ -0.74
BRCA1-216ENST00000484087 SPATA31D1Q6ZQQ2 1576 aa10.43□□□□□ -0.74
BRCA1-216ENST00000484087 VWDEQ8N2E2 1590 aa10.43□□□□□ -0.74
BRCA1-216ENST00000484087 ERVK-7P63135 1459 aa10.43□□□□□ -0.74
BRCA1-216ENST00000484087 TNRQ92752 1358 aa10.43□□□□□ -0.74
BRCA1-216ENST00000484087 POLR1AO95602 1720 aaPredicted RBP10.43□□□□□ -0.74
BRCA1-216ENST00000484087 RRBP1Q9P2E9 1410 aaKnown RBP10.43□□□□□ -0.74
BRCA1-216ENST00000484087 ANKRD50Q9ULJ7 1429 aa10.43□□□□□ -0.74
BRCA1-216ENST00000484087 EFCAB6Q5THR3 1501 aa10.41□□□□□ -0.74
BRCA1-216ENST00000484087 SYNMO15061 1565 aa10.41□□□□□ -0.74
BRCA1-216ENST00000484087 GCC2Q8IWJ2 1684 aa10.41□□□□□ -0.74
BRCA1-216ENST00000484087 A2ML1A8K2U0 1454 aa10.41□□□□□ -0.74
BRCA1-216ENST00000484087 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
BRCA1-216ENST00000484087 PIK3C2BO00750 1634 aa10.4□□□□□ -0.74
BRCA1-216ENST00000484087 UBR1Q8IWV7 1749 aa10.4□□□□□ -0.74
BRCA1-216ENST00000484087 AKT1S1Q96B36 256 aa10.4□□□□□ -0.74
BRCA1-216ENST00000484087 NEURL4Q96JN8 1562 aa10.4□□□□□ -0.74
BRCA1-216ENST00000484087 E9PCH4 1651 aa10.4□□□□□ -0.75
BRCA1-216ENST00000484087 MYO5BQ9ULV0 1848 aa10.39□□□□□ -0.75
BRCA1-216ENST00000484087 UGGT1Q9NYU2 1555 aa10.39□□□□□ -0.75
BRCA1-216ENST00000484087 TET3O43151 1660 aa10.39□□□□□ -0.75
BRCA1-216ENST00000484087 ZEB1P37275 1124 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-216ENST00000484087 ATF5Q9Y2D1 282 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-216ENST00000484087 ZBTB12Q9Y330 459 aaPredicted RBP10.38□□□□□ -0.75
BRCA1-216ENST00000484087 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
BRCA1-216ENST00000484087 LMTK2Q8IWU2 1503 aa10.38□□□□□ -0.75
BRCA1-216ENST00000484087 IQGAP3Q86VI3 1631 aa10.38□□□□□ -0.75
BRCA1-216ENST00000484087 ROCK1Q13464 1354 aa10.37□□□□□ -0.75
BRCA1-216ENST00000484087 PIP4P2Q8N4L2 257 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms