RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-208ENST00000483564 DISP1Q96F81 1524 aa12.04□□□□□ -0.48
GABRE-208ENST00000483564 LRPPRCP42704 1394 aaKnown RBP12.04□□□□□ -0.48
GABRE-208ENST00000483564 C8orf34Q49A92 452 aa12.03□□□□□ -0.48
GABRE-208ENST00000483564 CHD1O14646 1710 aa12.03□□□□□ -0.48
GABRE-208ENST00000483564 PDIA4P13667 645 aaKnown RBP12.03□□□□□ -0.48
GABRE-208ENST00000483564 CARMIL2Q6F5E8 1435 aa12.02□□□□□ -0.48
GABRE-208ENST00000483564 HECW1Q76N89 1606 aa12.02□□□□□ -0.49
GABRE-208ENST00000483564 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
GABRE-208ENST00000483564 USP47Q96K76 1375 aa12.01□□□□□ -0.49
GABRE-208ENST00000483564 JPH4Q96JJ6 628 aa12.01□□□□□ -0.49
GABRE-208ENST00000483564 PRDM4Q9UKN5 801 aa12.01□□□□□ -0.49
GABRE-208ENST00000483564 TEX14Q8IWB6 1497 aa12□□□□□ -0.49
GABRE-208ENST00000483564 FAM161AQ3B820 660 aa12□□□□□ -0.49
GABRE-208ENST00000483564 RPRD2Q5VT52 1461 aaKnown RBP12□□□□□ -0.49
GABRE-208ENST00000483564 ARID3CA6NKF2 412 aa11.99□□□□□ -0.49
GABRE-208ENST00000483564 KDM2BQ8NHM5 1336 aa11.99□□□□□ -0.49
GABRE-208ENST00000483564 MYBBP1AQ9BQG0 1328 aaKnown RBP11.99□□□□□ -0.49
GABRE-208ENST00000483564 LRRIQ1Q96JM4 1722 aa11.98□□□□□ -0.49
GABRE-208ENST00000483564 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
GABRE-208ENST00000483564 SLKQ9H2G2 1235 aaPredicted RBP11.97□□□□□ -0.49
GABRE-208ENST00000483564 PDE3BQ13370 1112 aa11.96□□□□□ -0.49
GABRE-208ENST00000483564 BRD4O60885 1362 aaPredicted RBP11.96□□□□□ -0.49
GABRE-208ENST00000483564 MIA2Q96PC5 1412 aa11.96□□□□□ -0.49
GABRE-208ENST00000483564 CLCN1P35523 988 aa11.96□□□□□ -0.49
GABRE-208ENST00000483564 RAPGEF6Q8TEU7 1601 aa11.95□□□□□ -0.5
GABRE-208ENST00000483564 KIF15Q9NS87 1388 aa11.95□□□□□ -0.5
GABRE-208ENST00000483564 SHROOM2Q13796 1616 aa11.95□□□□□ -0.5
GABRE-208ENST00000483564 ST20-MTHFSA0A0A6YYL1 179 aa11.95□□□□□ -0.5
GABRE-208ENST00000483564 EHBP1L1Q8N3D4 1523 aa11.94□□□□□ -0.5
GABRE-208ENST00000483564 RALBP1Q15311 655 aa11.94□□□□□ -0.5
GABRE-208ENST00000483564 PANK2Q9BZ23 570 aa11.94□□□□□ -0.5
GABRE-208ENST00000483564 EPRSP07814 1512 aaKnown RBP11.94□□□□□ -0.5
GABRE-208ENST00000483564 CALD1Q05682 793 aaKnown RBP11.94□□□□□ -0.5
GABRE-208ENST00000483564 KTN1Q86UP2 1357 aaKnown RBP11.94□□□□□ -0.5
GABRE-208ENST00000483564 SEC24BO95487 1268 aa11.93□□□□□ -0.5
GABRE-208ENST00000483564 XRCC6P12956 609 aaKnown RBP eCLIP11.93□□□□□ -0.5
GABRE-208ENST00000483564 CENPQQ7L2Z9 268 aaPredicted RBP11.93□□□□□ -0.5
GABRE-208ENST00000483564 CARD11Q9BXL7 1154 aa11.93□□□□□ -0.5
GABRE-208ENST00000483564 PDCL3Q9H2J4 239 aa11.92□□□□□ -0.5
GABRE-208ENST00000483564 SUPT6HQ7KZ85 1726 aaKnown RBP11.92□□□□□ -0.5
GABRE-208ENST00000483564 USP19O94966 1318 aa11.92□□□□□ -0.5
GABRE-208ENST00000483564 NLRP13Q86W25 1043 aa11.92□□□□□ -0.5
GABRE-208ENST00000483564 GZF1Q9H116 711 aaPredicted RBP11.92□□□□□ -0.5
GABRE-208ENST00000483564 PRG4Q92954 1404 aaPredicted RBP11.91□□□□□ -0.5
GABRE-208ENST00000483564 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
GABRE-208ENST00000483564 ZNF644Q9H582 1327 aaPredicted RBP11.91□□□□□ -0.5
GABRE-208ENST00000483564 L1TD1Q5T7N2 865 aaKnown RBP11.91□□□□□ -0.5
GABRE-208ENST00000483564 MAGI3Q5TCQ9 1506 aa11.9□□□□□ -0.5
GABRE-208ENST00000483564 CC2D1BQ5T0F9 858 aaKnown RBP11.9□□□□□ -0.5
GABRE-208ENST00000483564 CLASP1Q7Z460 1538 aa11.9□□□□□ -0.5
GABRE-208ENST00000483564 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
GABRE-208ENST00000483564 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
GABRE-208ENST00000483564 SPRYD3Q8NCJ5 442 aa11.88□□□□□ -0.51
GABRE-208ENST00000483564 ROCK2O75116 1388 aaKnown RBP11.88□□□□□ -0.51
GABRE-208ENST00000483564 ABCA8O94911 1581 aa11.88□□□□□ -0.51
GABRE-208ENST00000483564 CDK13Q14004 1512 aaKnown RBP11.87□□□□□ -0.51
GABRE-208ENST00000483564 TCOF1Q13428 1488 aaKnown RBP11.87□□□□□ -0.51
GABRE-208ENST00000483564 CHMP4BQ9H444 224 aaKnown RBP11.87□□□□□ -0.51
GABRE-208ENST00000483564 POLR1AO95602 1720 aaPredicted RBP11.87□□□□□ -0.51
GABRE-208ENST00000483564 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
GABRE-208ENST00000483564 PTPRGP23470 1445 aa11.86□□□□□ -0.51
GABRE-208ENST00000483564 ZHX1Q9UKY1 873 aaPredicted RBP11.86□□□□□ -0.51
GABRE-208ENST00000483564 GCC2Q8IWJ2 1684 aa11.86□□□□□ -0.51
GABRE-208ENST00000483564 PLB1Q6P1J6 1458 aa11.86□□□□□ -0.51
GABRE-208ENST00000483564 PKD2Q13563 968 aa11.86□□□□□ -0.51
GABRE-208ENST00000483564 ARID3AQ99856 593 aa11.86□□□□□ -0.51
GABRE-208ENST00000483564 GOLGA6L3A6NEY3 463 aa11.85□□□□□ -0.51
GABRE-208ENST00000483564 IGHDP01880 384 aa11.85□□□□□ -0.51
GABRE-208ENST00000483564 CENPJQ9HC77 1338 aaPredicted RBP11.85□□□□□ -0.51
GABRE-208ENST00000483564 PER1O15534 1290 aaPredicted RBP11.85□□□□□ -0.51
GABRE-208ENST00000483564 ANTXR1Q9H6X2 564 aa11.85□□□□□ -0.51
GABRE-208ENST00000483564 ADAMTS8Q9UP79 889 aa11.84□□□□□ -0.51
GABRE-208ENST00000483564 DUSP27Q5VZP5 1158 aa11.84□□□□□ -0.51
GABRE-208ENST00000483564 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
GABRE-208ENST00000483564 PARD3Q8TEW0 1356 aa11.83□□□□□ -0.52
GABRE-208ENST00000483564 MBD5Q9P267 1494 aa11.83□□□□□ -0.52
GABRE-208ENST00000483564 KDM5CP41229 1560 aa11.83□□□□□ -0.52
GABRE-208ENST00000483564 FSD2A1L4K1 749 aa11.83□□□□□ -0.52
GABRE-208ENST00000483564 GTF2E1P29083 439 aaPredicted RBP11.82□□□□□ -0.52
GABRE-208ENST00000483564 ERBB4Q15303 1308 aa11.82□□□□□ -0.52
GABRE-208ENST00000483564 ESPNB1AK53 854 aa11.81□□□□□ -0.52
GABRE-208ENST00000483564 BECN1Q14457 450 aa11.81□□□□□ -0.52
GABRE-208ENST00000483564 ABCC5O15440 1437 aa11.81□□□□□ -0.52
GABRE-208ENST00000483564 TROQ12816 1431 aaPredicted RBP11.81□□□□□ -0.52
GABRE-208ENST00000483564 PLEKHH1Q9ULM0 1364 aa11.81□□□□□ -0.52
GABRE-208ENST00000483564 BCAR3O75815 825 aa11.8□□□□□ -0.52
GABRE-208ENST00000483564 TPM2P07951 284 aa11.8□□□□□ -0.52
GABRE-208ENST00000483564 ADCY10Q96PN6 1610 aa11.8□□□□□ -0.52
GABRE-208ENST00000483564 PZPP20742 1482 aa11.8□□□□□ -0.52
GABRE-208ENST00000483564 DAPK1P53355 1430 aa11.8□□□□□ -0.52
GABRE-208ENST00000483564 TBC1D2Q9BYX2 928 aa11.8□□□□□ -0.52
GABRE-208ENST00000483564 PRDM10Q9NQV6 1147 aa11.8□□□□□ -0.52
GABRE-208ENST00000483564 KIAA1211Q6ZU35 1233 aa11.79□□□□□ -0.52
GABRE-208ENST00000483564 ATP10BO94823 1461 aa11.79□□□□□ -0.52
GABRE-208ENST00000483564 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
GABRE-208ENST00000483564 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
GABRE-208ENST00000483564 MCM4P33991 863 aa11.78□□□□□ -0.52
GABRE-208ENST00000483564 FAM13BQ9NYF5 915 aa11.78□□□□□ -0.52
GABRE-208ENST00000483564 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
GABRE-208ENST00000483564 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms