RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 DISP3Q9P2K9 1392 aa11.86□□□□□ -0.51
SORT1-205ENST00000483508 INO80Q9ULG1 1556 aaPredicted RBP11.86□□□□□ -0.51
SORT1-205ENST00000483508 ADGBQ8N7X0 1667 aa11.86□□□□□ -0.51
SORT1-205ENST00000483508 NEUROD1Q13562 356 aa11.84□□□□□ -0.51
SORT1-205ENST00000483508 PKD2Q13563 968 aa11.84□□□□□ -0.51
SORT1-205ENST00000483508 KIF3BO15066 747 aa11.83□□□□□ -0.52
SORT1-205ENST00000483508 RSPH4AQ5TD94 716 aa11.83□□□□□ -0.52
SORT1-205ENST00000483508 PLXNC1O60486 1568 aa11.83□□□□□ -0.52
SORT1-205ENST00000483508 TSPY4P0CV99 314 aa11.82□□□□□ -0.52
SORT1-205ENST00000483508 TSPY10P0CW01 314 aa11.82□□□□□ -0.52
SORT1-205ENST00000483508 RTEL1-TNFRSF6BF6WH68 1400 aa11.82□□□□□ -0.52
SORT1-205ENST00000483508 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
SORT1-205ENST00000483508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.81□□□□□ -0.52
SORT1-205ENST00000483508 PTPRKQ15262 1439 aa11.81□□□□□ -0.52
SORT1-205ENST00000483508 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
SORT1-205ENST00000483508 DHX29Q7Z478 1369 aaKnown RBP11.8□□□□□ -0.52
SORT1-205ENST00000483508 CEP170BQ9Y4F5 1589 aaPredicted RBP11.8□□□□□ -0.52
SORT1-205ENST00000483508 LTBP4Q8N2S1 1624 aa11.8□□□□□ -0.52
SORT1-205ENST00000483508 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
SORT1-205ENST00000483508 IQSEC2Q5JU85 1478 aa11.8□□□□□ -0.52
SORT1-205ENST00000483508 ZNF142P52746 1687 aaPredicted RBP11.8□□□□□ -0.52
SORT1-205ENST00000483508 ZNF335Q9H4Z2 1342 aaPredicted RBP11.8□□□□□ -0.52
SORT1-205ENST00000483508 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
SORT1-205ENST00000483508 CCDC141Q6ZP82 1450 aa11.79□□□□□ -0.52
SORT1-205ENST00000483508 MBD5Q9P267 1494 aa11.79□□□□□ -0.52
SORT1-205ENST00000483508 CAMSAP2Q08AD1 1489 aa11.78□□□□□ -0.52
SORT1-205ENST00000483508 PLA2R1Q13018 1463 aa11.78□□□□□ -0.52
SORT1-205ENST00000483508 SETD5Q9C0A6 1442 aa11.77□□□□□ -0.52
SORT1-205ENST00000483508 TNRQ92752 1358 aa11.77□□□□□ -0.53
SORT1-205ENST00000483508 A2ML1A8K2U0 1454 aa11.76□□□□□ -0.53
SORT1-205ENST00000483508 FBXO31Q5XUX0 539 aaPredicted RBP11.76□□□□□ -0.53
SORT1-205ENST00000483508 RAB3GAP2Q9H2M9 1393 aa11.76□□□□□ -0.53
SORT1-205ENST00000483508 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
SORT1-205ENST00000483508 ANKLE2Q86XL3 938 aa11.75□□□□□ -0.53
SORT1-205ENST00000483508 THEMISQ8N1K5 641 aaPredicted RBP11.75□□□□□ -0.53
SORT1-205ENST00000483508 ILDR2Q71H61 639 aa11.74□□□□□ -0.53
SORT1-205ENST00000483508 MIER1Q8N108 512 aa11.74□□□□□ -0.53
SORT1-205ENST00000483508 TCOF1Q13428 1488 aaKnown RBP11.74□□□□□ -0.53
SORT1-205ENST00000483508 SPATA31D1Q6ZQQ2 1576 aa11.74□□□□□ -0.53
SORT1-205ENST00000483508 DNMT1P26358 1616 aaKnown RBP11.74□□□□□ -0.53
SORT1-205ENST00000483508 FAM135AQ9P2D6 1515 aa11.72□□□□□ -0.53
SORT1-205ENST00000483508 PZPP20742 1482 aa11.72□□□□□ -0.53
SORT1-205ENST00000483508 PIP4K2BP78356 416 aa11.72□□□□□ -0.53
SORT1-205ENST00000483508 GTF3C3Q9Y5Q9 886 aa11.72□□□□□ -0.53
SORT1-205ENST00000483508 POLR1AO95602 1720 aaPredicted RBP11.72□□□□□ -0.53
SORT1-205ENST00000483508 ARHGEF5Q12774 1597 aa11.71□□□□□ -0.53
SORT1-205ENST00000483508 MYOM3Q5VTT5 1437 aa11.71□□□□□ -0.53
SORT1-205ENST00000483508 SOCS7O14512 581 aa11.71□□□□□ -0.53
SORT1-205ENST00000483508 TOM1O60784 492 aa11.71□□□□□ -0.53
SORT1-205ENST00000483508 MIA2Q96PC5 1412 aa11.7□□□□□ -0.54
SORT1-205ENST00000483508 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
SORT1-205ENST00000483508 UGGT1Q9NYU2 1555 aa11.69□□□□□ -0.54
SORT1-205ENST00000483508 NLRP1Q9C000 1473 aa11.69□□□□□ -0.54
SORT1-205ENST00000483508 CPS1P31327 1500 aa11.68□□□□□ -0.54
SORT1-205ENST00000483508 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
SORT1-205ENST00000483508 PTPN23Q9H3S7 1636 aa11.68□□□□□ -0.54
SORT1-205ENST00000483508 SHANK2Q9UPX8 1470 aa11.67□□□□□ -0.54
SORT1-205ENST00000483508 ITGAEP38570 1179 aa11.66□□□□□ -0.54
SORT1-205ENST00000483508 NPHP4O75161 1426 aaPredicted RBP11.66□□□□□ -0.54
SORT1-205ENST00000483508 ZC3H13Q5T200 1668 aaKnown RBP11.65□□□□□ -0.54
SORT1-205ENST00000483508 FAM50AQ14320 339 aaKnown RBP11.65□□□□□ -0.54
SORT1-205ENST00000483508 MAST1Q9Y2H9 1570 aa11.65□□□□□ -0.54
SORT1-205ENST00000483508 CFAP65Q6ZU64 1925 aaKnown RBP11.64□□□□□ -0.55
SORT1-205ENST00000483508 EIF2AK4Q9P2K8 1649 aaKnown RBP11.64□□□□□ -0.55
SORT1-205ENST00000483508 NEURL4Q96JN8 1562 aa11.64□□□□□ -0.55
SORT1-205ENST00000483508 HSPA1LP34931 641 aa11.64□□□□□ -0.55
SORT1-205ENST00000483508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.64□□□□□ -0.55
SORT1-205ENST00000483508 RRP7BPQ9NSQ0 103 aa11.64□□□□□ -0.55
SORT1-205ENST00000483508 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
SORT1-205ENST00000483508 GCC2Q8IWJ2 1684 aa11.64□□□□□ -0.55
SORT1-205ENST00000483508 RNF17Q9BXT8 1623 aaKnown RBP11.64□□□□□ -0.55
SORT1-205ENST00000483508 CROCC2H7BZ55 1655 aa11.63□□□□□ -0.55
SORT1-205ENST00000483508 ABCC3O15438 1527 aa11.63□□□□□ -0.55
SORT1-205ENST00000483508 DUOX2Q9NRD8 1548 aa11.63□□□□□ -0.55
SORT1-205ENST00000483508 DEPDC5O75140 1603 aa11.63□□□□□ -0.55
SORT1-205ENST00000483508 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
SORT1-205ENST00000483508 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
SORT1-205ENST00000483508 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
SORT1-205ENST00000483508 CEP152O94986 1710 aa11.62□□□□□ -0.55
SORT1-205ENST00000483508 KANK1Q14678 1352 aa11.62□□□□□ -0.55
SORT1-205ENST00000483508 ERVK-7P63135 1459 aa11.62□□□□□ -0.55
SORT1-205ENST00000483508 IQGAP1P46940 1657 aa11.62□□□□□ -0.55
SORT1-205ENST00000483508 KIF15Q9NS87 1388 aa11.61□□□□□ -0.55
SORT1-205ENST00000483508 MED14O60244 1454 aa11.61□□□□□ -0.55
SORT1-205ENST00000483508 TXNDC2Q86VQ3 553 aa11.6□□□□□ -0.55
SORT1-205ENST00000483508 VWDEQ8N2E2 1590 aa11.59□□□□□ -0.55
SORT1-205ENST00000483508 CHIC2Q9UKJ5 165 aa11.59□□□□□ -0.55
SORT1-205ENST00000483508 ERBINQ96RT1 1412 aa11.58□□□□□ -0.56
SORT1-205ENST00000483508 DAPK1P53355 1430 aa11.57□□□□□ -0.56
SORT1-205ENST00000483508 UBR1Q8IWV7 1749 aa11.57□□□□□ -0.56
SORT1-205ENST00000483508 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
SORT1-205ENST00000483508 MROH1Q8NDA8 1641 aa11.57□□□□□ -0.56
SORT1-205ENST00000483508 ANKRD30AQ9BXX3 1397 aa11.56□□□□□ -0.56
SORT1-205ENST00000483508 ABCC5O15440 1437 aa11.56□□□□□ -0.56
SORT1-205ENST00000483508 BCANQ96GW7 911 aa11.56□□□□□ -0.56
SORT1-205ENST00000483508 MED1Q15648 1581 aaPredicted RBP11.55□□□□□ -0.56
SORT1-205ENST00000483508 LRRC7Q96NW7 1537 aa11.55□□□□□ -0.56
SORT1-205ENST00000483508 SYNMO15061 1565 aa11.54□□□□□ -0.56
SORT1-205ENST00000483508 ARHGAP31Q2M1Z3 1444 aa11.54□□□□□ -0.56
SORT1-205ENST00000483508 LTKP29376 864 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms