RNA–Protein interactions for RNA: ENST00000483020.5

TSC2-213, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-213ENST00000483020 ZNF644Q9H582 1327 aaPredicted RBP21.12■□□□□ 0.97
TSC2-213ENST00000483020 SCAF1Q9H7N4 1312 aaKnown RBP21.11■□□□□ 0.97
TSC2-213ENST00000483020 HSPA1LP34931 641 aa21.11■□□□□ 0.97
TSC2-213ENST00000483020 RTEL1-TNFRSF6BF6WH68 1400 aa21.11■□□□□ 0.97
TSC2-213ENST00000483020 EHBP1L1Q8N3D4 1523 aa21.1■□□□□ 0.97
TSC2-213ENST00000483020 KDM5DQ9BY66 1539 aa21.1■□□□□ 0.97
TSC2-213ENST00000483020 TNRQ92752 1358 aa21.1■□□□□ 0.97
TSC2-213ENST00000483020 PZPP20742 1482 aa21.09■□□□□ 0.97
TSC2-213ENST00000483020 SHANK2Q9UPX8 1470 aa21.09■□□□□ 0.97
TSC2-213ENST00000483020 PIP4K2BP78356 416 aa21.09■□□□□ 0.97
TSC2-213ENST00000483020 DHX29Q7Z478 1369 aaKnown RBP21.09■□□□□ 0.97
TSC2-213ENST00000483020 VWDEQ8N2E2 1590 aa21.08■□□□□ 0.97
TSC2-213ENST00000483020 FAM135AQ9P2D6 1515 aa21.08■□□□□ 0.96
TSC2-213ENST00000483020 FBXO31Q5XUX0 539 aaPredicted RBP21.07■□□□□ 0.96
TSC2-213ENST00000483020 ALKQ9UM73 1620 aa21.06■□□□□ 0.96
TSC2-213ENST00000483020 TOM1O60784 492 aa21.05■□□□□ 0.96
TSC2-213ENST00000483020 DEPDC5O75140 1603 aa21.04■□□□□ 0.96
TSC2-213ENST00000483020 CCDC141Q6ZP82 1450 aa21.03■□□□□ 0.96
TSC2-213ENST00000483020 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.03■□□□□ 0.964e-9■□□□□ 9.9
TSC2-213ENST00000483020 KIF3BO15066 747 aa21.02■□□□□ 0.96
TSC2-213ENST00000483020 UGGT1Q9NYU2 1555 aa21.02■□□□□ 0.95
TSC2-213ENST00000483020 IQGAP1P46940 1657 aa21.01■□□□□ 0.95
TSC2-213ENST00000483020 CAMSAP2Q08AD1 1489 aa21.01■□□□□ 0.95
TSC2-213ENST00000483020 NLRP1Q9C000 1473 aa21.01■□□□□ 0.95
TSC2-213ENST00000483020 STRCP1A6NGW2 1772 aa21■□□□□ 0.95
TSC2-213ENST00000483020 MED14O60244 1454 aa21■□□□□ 0.95
TSC2-213ENST00000483020 NPHP4O75161 1426 aaPredicted RBP20.99■□□□□ 0.95
TSC2-213ENST00000483020 MIA2Q96PC5 1412 aa20.99■□□□□ 0.95
TSC2-213ENST00000483020 ANKLE2Q86XL3 938 aa20.99■□□□□ 0.95
TSC2-213ENST00000483020 WASHC2CQ9Y4E1 1318 aa20.98■□□□□ 0.95
TSC2-213ENST00000483020 THEMISQ8N1K5 641 aaPredicted RBP20.95■□□□□ 0.94
TSC2-213ENST00000483020 RNF17Q9BXT8 1623 aaKnown RBP20.95■□□□□ 0.94
TSC2-213ENST00000483020 VPS8Q8N3P4 1428 aa20.95■□□□□ 0.94
TSC2-213ENST00000483020 NCOA2Q15596 1464 aa20.94■□□□□ 0.94
TSC2-213ENST00000483020 SYNMO15061 1565 aa20.94■□□□□ 0.94
TSC2-213ENST00000483020 ARHGEF5Q12774 1597 aa20.93■□□□□ 0.94
TSC2-213ENST00000483020 ZC3H13Q5T200 1668 aaKnown RBP20.93■□□□□ 0.94
TSC2-213ENST00000483020 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
TSC2-213ENST00000483020 ABCC3O15438 1527 aa20.91■□□□□ 0.94
TSC2-213ENST00000483020 LRRC7Q96NW7 1537 aa20.91■□□□□ 0.94
TSC2-213ENST00000483020 CFAP65Q6ZU64 1925 aaKnown RBP20.88■□□□□ 0.93
TSC2-213ENST00000483020 RSPH4AQ5TD94 716 aa20.88■□□□□ 0.93
TSC2-213ENST00000483020 CEP152O94986 1710 aa20.87■□□□□ 0.93
TSC2-213ENST00000483020 UBR1Q8IWV7 1749 aa20.87■□□□□ 0.93
TSC2-213ENST00000483020 EIF2AK4Q9P2K8 1649 aaKnown RBP20.87■□□□□ 0.93
TSC2-213ENST00000483020 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
TSC2-213ENST00000483020 ERVK-7P63135 1459 aa20.87■□□□□ 0.93
TSC2-213ENST00000483020 MROH1Q8NDA8 1641 aa20.86■□□□□ 0.93
TSC2-213ENST00000483020 MAST1Q9Y2H9 1570 aa20.85■□□□□ 0.93
TSC2-213ENST00000483020 XIRP1Q702N8 1843 aaKnown RBP20.84■□□□□ 0.93
TSC2-213ENST00000483020 TSPY4P0CV99 314 aa20.82■□□□□ 0.92
TSC2-213ENST00000483020 TSPY10P0CW01 314 aa20.82■□□□□ 0.92
TSC2-213ENST00000483020 SCAF11Q99590 1463 aaKnown RBP20.8■□□□□ 0.92
TSC2-213ENST00000483020 MAP3K1Q13233 1512 aa20.79■□□□□ 0.92
TSC2-213ENST00000483020 SLIT1O75093 1534 aa20.77■□□□□ 0.92
TSC2-213ENST00000483020 ARHGAP23Q9P227 1491 aa20.76■□□□□ 0.91
TSC2-213ENST00000483020 APLP2Q06481 763 aa20.76■□□□□ 0.91
TSC2-213ENST00000483020 LRRC9Q6ZRR7 1453 aa20.75■□□□□ 0.91
TSC2-213ENST00000483020 KANK4Q5T7N3 995 aaPredicted RBP20.75■□□□□ 0.91
TSC2-213ENST00000483020 RGS17Q9UGC6 210 aaPredicted RBP20.74■□□□□ 0.91
TSC2-213ENST00000483020 PRDM15P57071 1507 aaPredicted RBP20.73■□□□□ 0.91
TSC2-213ENST00000483020 LTKP29376 864 aa20.72■□□□□ 0.91
TSC2-213ENST00000483020 DUOX2Q9NRD8 1548 aa20.72■□□□□ 0.91
TSC2-213ENST00000483020 PIK3C2BO00750 1634 aa20.71■□□□□ 0.91
TSC2-213ENST00000483020 CROCC2H7BZ55 1655 aa20.69■□□□□ 0.9
TSC2-213ENST00000483020 ARHGAP31Q2M1Z3 1444 aa20.69■□□□□ 0.9
TSC2-213ENST00000483020 TXNDC2Q86VQ3 553 aa20.68■□□□□ 0.9
TSC2-213ENST00000483020 MYOM3Q5VTT5 1437 aa20.66■□□□□ 0.9
TSC2-213ENST00000483020 ROBO1Q9Y6N7 1651 aa20.66■□□□□ 0.9
TSC2-213ENST00000483020 FAM135BQ49AJ0 1406 aa20.65■□□□□ 0.9
TSC2-213ENST00000483020 KDM5AP29375 1690 aaKnown RBP20.64■□□□□ 0.9
TSC2-213ENST00000483020 ERBINQ96RT1 1412 aa20.63■□□□□ 0.89
TSC2-213ENST00000483020 KIF15Q9NS87 1388 aa20.63■□□□□ 0.89
TSC2-213ENST00000483020 TMEM2Q9UHN6 1383 aa20.63■□□□□ 0.89
TSC2-213ENST00000483020 EID1Q9Y6B2 187 aa20.63■□□□□ 0.89
TSC2-213ENST00000483020 TMEM94Q12767 1356 aa20.61■□□□□ 0.89
TSC2-213ENST00000483020 EFCAB6Q5THR3 1501 aa20.61■□□□□ 0.89
TSC2-213ENST00000483020 POTEAQ6S8J7 498 aa20.59■□□□□ 0.89
TSC2-213ENST00000483020 SETD1AO15047 1707 aaKnown RBP20.58■□□□□ 0.89
TSC2-213ENST00000483020 TET3O43151 1660 aa20.58■□□□□ 0.89
TSC2-213ENST00000483020 NWD1Q149M9 1564 aa20.57■□□□□ 0.88
TSC2-213ENST00000483020 ABCC5O15440 1437 aa20.56■□□□□ 0.88
TSC2-213ENST00000483020 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
TSC2-213ENST00000483020 LMTK2Q8IWU2 1503 aa20.55■□□□□ 0.88
TSC2-213ENST00000483020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.883e-6■■■□□ 16.9
TSC2-213ENST00000483020 RRP7BPQ9NSQ0 103 aa20.55■□□□□ 0.88
TSC2-213ENST00000483020 STAG3Q9UJ98 1225 aa20.55■□□□□ 0.88
TSC2-213ENST00000483020 ADGRB3O60242 1522 aa20.54■□□□□ 0.88
TSC2-213ENST00000483020 PHLPP1O60346 1717 aa20.54■□□□□ 0.88
TSC2-213ENST00000483020 KCNA6P17658 529 aa20.54■□□□□ 0.88
TSC2-213ENST00000483020 RBM33Q96EV2 1170 aaKnown RBP20.54■□□□□ 0.88
TSC2-213ENST00000483020 NKTRP30414 1462 aaKnown RBP20.54■□□□□ 0.88
TSC2-213ENST00000483020 KANK1Q14678 1352 aa20.52■□□□□ 0.88
TSC2-213ENST00000483020 SLC26A8Q96RN1 970 aa20.52■□□□□ 0.88
TSC2-213ENST00000483020 DAPK1P53355 1430 aa20.52■□□□□ 0.87
TSC2-213ENST00000483020 IDI1Q13907 227 aa20.51■□□□□ 0.87
TSC2-213ENST00000483020 PROSER2Q86WR7 435 aaPredicted RBP20.51■□□□□ 0.87
TSC2-213ENST00000483020 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
TSC2-213ENST00000483020 NOS1P29475 1434 aa20.49■□□□□ 0.87
TSC2-213ENST00000483020 CHD2O14647 1828 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms