RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TNRQ92752 1358 aa24.47■■□□□ 1.51
HDAC6-224ENST00000481929 ANKLE2Q86XL3 938 aa24.43■■□□□ 1.5
HDAC6-224ENST00000481929 VWDEQ8N2E2 1590 aa24.42■■□□□ 1.5
HDAC6-224ENST00000481929 FBXO31Q5XUX0 539 aaPredicted RBP24.41■■□□□ 1.5
HDAC6-224ENST00000481929 PZPP20742 1482 aa24.4■■□□□ 1.5
HDAC6-224ENST00000481929 DHX29Q7Z478 1369 aaKnown RBP24.4■■□□□ 1.5
HDAC6-224ENST00000481929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.4■■□□□ 1.5
HDAC6-224ENST00000481929 RTEL1-TNFRSF6BF6WH68 1400 aa24.39■■□□□ 1.5
HDAC6-224ENST00000481929 KDM5DQ9BY66 1539 aa24.38■■□□□ 1.49
HDAC6-224ENST00000481929 MTUS2Q5JR59 1369 aa24.38■■□□□ 1.49
HDAC6-224ENST00000481929 FAM135AQ9P2D6 1515 aa24.37■■□□□ 1.49
HDAC6-224ENST00000481929 ALKQ9UM73 1620 aa24.37■■□□□ 1.49
HDAC6-224ENST00000481929 THEMISQ8N1K5 641 aaPredicted RBP24.37■■□□□ 1.49
HDAC6-224ENST00000481929 ZNF644Q9H582 1327 aaPredicted RBP24.36■■□□□ 1.49
HDAC6-224ENST00000481929 NPHP4O75161 1426 aaPredicted RBP24.36■■□□□ 1.49
HDAC6-224ENST00000481929 MBD5Q9P267 1494 aa24.36■■□□□ 1.49
HDAC6-224ENST00000481929 KIF3BO15066 747 aa24.35■■□□□ 1.49
HDAC6-224ENST00000481929 MED14O60244 1454 aa24.34■■□□□ 1.49
HDAC6-224ENST00000481929 NLRP1Q9C000 1473 aa24.34■■□□□ 1.49
HDAC6-224ENST00000481929 DEPDC5O75140 1603 aa24.34■■□□□ 1.49
HDAC6-224ENST00000481929 UGGT1Q9NYU2 1555 aa24.33■■□□□ 1.49
HDAC6-224ENST00000481929 WASHC2CQ9Y4E1 1318 aa24.33■■□□□ 1.48
HDAC6-224ENST00000481929 SENP3Q9H4L4 574 aaPredicted RBP24.32■■□□□ 1.48
HDAC6-224ENST00000481929 MIA2Q96PC5 1412 aa24.32■■□□□ 1.48
HDAC6-224ENST00000481929 TIAM1Q13009 1591 aa24.32■■□□□ 1.48
HDAC6-224ENST00000481929 IQGAP1P46940 1657 aa24.29■■□□□ 1.48
HDAC6-224ENST00000481929 CHIC1Q5VXU3 224 aa24.28■■□□□ 1.48
HDAC6-224ENST00000481929 RNF17Q9BXT8 1623 aaKnown RBP24.28■■□□□ 1.48
HDAC6-224ENST00000481929 LRRC7Q96NW7 1537 aa24.27■■□□□ 1.48
HDAC6-224ENST00000481929 SYNMO15061 1565 aa24.26■■□□□ 1.47
HDAC6-224ENST00000481929 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
HDAC6-224ENST00000481929 EHBP1L1Q8N3D4 1523 aa24.25■■□□□ 1.47
HDAC6-224ENST00000481929 STRCP1A6NGW2 1772 aa24.23■■□□□ 1.47
HDAC6-224ENST00000481929 CEP162Q5TB80 1403 aa24.21■■□□□ 1.47
HDAC6-224ENST00000481929 RSPH4AQ5TD94 716 aa24.18■■□□□ 1.46
HDAC6-224ENST00000481929 CAMSAP2Q08AD1 1489 aa24.18■■□□□ 1.46
HDAC6-224ENST00000481929 RGS17Q9UGC6 210 aaPredicted RBP24.17■■□□□ 1.46
HDAC6-224ENST00000481929 ZC3H13Q5T200 1668 aaKnown RBP24.12■■□□□ 1.45
HDAC6-224ENST00000481929 ABCC3O15438 1527 aa24.12■■□□□ 1.45
HDAC6-224ENST00000481929 ERVK-7P63135 1459 aa24.12■■□□□ 1.45
HDAC6-224ENST00000481929 TSPY4P0CV99 314 aa24.1■■□□□ 1.45
HDAC6-224ENST00000481929 TSPY10P0CW01 314 aa24.1■■□□□ 1.45
HDAC6-224ENST00000481929 SCAF11Q99590 1463 aaKnown RBP24.1■■□□□ 1.45
HDAC6-224ENST00000481929 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.45
HDAC6-224ENST00000481929 NCOA2Q15596 1464 aa24.07■■□□□ 1.44
HDAC6-224ENST00000481929 UBR1Q8IWV7 1749 aa24.06■■□□□ 1.44
HDAC6-224ENST00000481929 FAM135BQ49AJ0 1406 aa24.03■■□□□ 1.44
HDAC6-224ENST00000481929 POTEAQ6S8J7 498 aa24.03■■□□□ 1.44
HDAC6-224ENST00000481929 TXNDC2Q86VQ3 553 aa24.02■■□□□ 1.44
HDAC6-224ENST00000481929 XIRP1Q702N8 1843 aaKnown RBP24.02■■□□□ 1.44
HDAC6-224ENST00000481929 ARHGAP23Q9P227 1491 aa24.01■■□□□ 1.43
HDAC6-224ENST00000481929 SLIT1O75093 1534 aa24.01■■□□□ 1.43
HDAC6-224ENST00000481929 LTKP29376 864 aa24.01■■□□□ 1.43
HDAC6-224ENST00000481929 EIF2AK4Q9P2K8 1649 aaKnown RBP24.01■■□□□ 1.43
HDAC6-224ENST00000481929 EID1Q9Y6B2 187 aa23.99■■□□□ 1.43
HDAC6-224ENST00000481929 MROH1Q8NDA8 1641 aa23.99■■□□□ 1.43
HDAC6-224ENST00000481929 MAST1Q9Y2H9 1570 aa23.98■■□□□ 1.43
HDAC6-224ENST00000481929 CEP152O94986 1710 aa23.98■■□□□ 1.43
HDAC6-224ENST00000481929 CFAP65Q6ZU64 1925 aaKnown RBP23.97■■□□□ 1.43
HDAC6-224ENST00000481929 TMEM94Q12767 1356 aa23.94■■□□□ 1.42
HDAC6-224ENST00000481929 ROBO1Q9Y6N7 1651 aa23.92■■□□□ 1.42
HDAC6-224ENST00000481929 ARHGAP31Q2M1Z3 1444 aa23.91■■□□□ 1.42
HDAC6-224ENST00000481929 TMEM2Q9UHN6 1383 aa23.9■■□□□ 1.42
HDAC6-224ENST00000481929 LRRC9Q6ZRR7 1453 aa23.89■■□□□ 1.42
HDAC6-224ENST00000481929 STAG3Q9UJ98 1225 aa23.88■■□□□ 1.41
HDAC6-224ENST00000481929 DUOX2Q9NRD8 1548 aa23.88■■□□□ 1.41
HDAC6-224ENST00000481929 SETD1AO15047 1707 aaKnown RBP23.87■■□□□ 1.41
HDAC6-224ENST00000481929 KCNA6P17658 529 aa23.87■■□□□ 1.41
HDAC6-224ENST00000481929 MAP3K1Q13233 1512 aa23.87■■□□□ 1.41
HDAC6-224ENST00000481929 PIK3C2BO00750 1634 aa23.87■■□□□ 1.41
HDAC6-224ENST00000481929 PROSER2Q86WR7 435 aaPredicted RBP23.86■■□□□ 1.41
HDAC6-224ENST00000481929 PRDM15P57071 1507 aaPredicted RBP23.85■■□□□ 1.41
HDAC6-224ENST00000481929 EFCAB6Q5THR3 1501 aa23.82■■□□□ 1.4
HDAC6-224ENST00000481929 RBM33Q96EV2 1170 aaKnown RBP23.81■■□□□ 1.4
HDAC6-224ENST00000481929 SLC26A8Q96RN1 970 aa23.81■■□□□ 1.4
HDAC6-224ENST00000481929 NKTRP30414 1462 aaKnown RBP23.81■■□□□ 1.4
HDAC6-224ENST00000481929 JCADQ9P266 1359 aa23.8■■□□□ 1.4
HDAC6-224ENST00000481929 MSH6P52701 1360 aa23.79■■□□□ 1.4
HDAC6-224ENST00000481929 KIF15Q9NS87 1388 aa23.79■■□□□ 1.4
HDAC6-224ENST00000481929 MYOM3Q5VTT5 1437 aa23.79■■□□□ 1.4
HDAC6-224ENST00000481929 ERBINQ96RT1 1412 aa23.79■■□□□ 1.4
HDAC6-224ENST00000481929 KDM5AP29375 1690 aaKnown RBP23.79■■□□□ 1.4
HDAC6-224ENST00000481929 PHLPP1O60346 1717 aa23.79■■□□□ 1.4
HDAC6-224ENST00000481929 TET3O43151 1660 aa23.78■■□□□ 1.4
HDAC6-224ENST00000481929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.77■■□□□ 1.42e-7■■□□□ 14.2
HDAC6-224ENST00000481929 NWD1Q149M9 1564 aa23.77■■□□□ 1.4
HDAC6-224ENST00000481929 KANK1Q14678 1352 aa23.77■■□□□ 1.4
HDAC6-224ENST00000481929 SLAIN2Q9P270 581 aa23.76■■□□□ 1.39
HDAC6-224ENST00000481929 IDI1Q13907 227 aa23.75■■□□□ 1.39
HDAC6-224ENST00000481929 BCANQ96GW7 911 aa23.72■■□□□ 1.39
HDAC6-224ENST00000481929 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
HDAC6-224ENST00000481929 UPF1Q92900 1129 aaKnown RBP eCLIP23.7■■□□□ 1.38
HDAC6-224ENST00000481929 ADGRB3O60242 1522 aa23.69■■□□□ 1.38
HDAC6-224ENST00000481929 MEX3CQ5U5Q3 659 aaKnown RBP23.69■■□□□ 1.38
HDAC6-224ENST00000481929 ZNF772Q68DY9 489 aaPredicted RBP23.69■■□□□ 1.38
HDAC6-224ENST00000481929 COL16A1Q07092 1604 aaPredicted RBP23.69■■□□□ 1.38
HDAC6-224ENST00000481929 LMTK2Q8IWU2 1503 aa23.69■■□□□ 1.38
HDAC6-224ENST00000481929 SPATA31A6Q5VVP1 1343 aa23.68■■□□□ 1.38
HDAC6-224ENST00000481929 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
HDAC6-224ENST00000481929 FGD6Q6ZV73 1430 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms