RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 CEP170Q5SW79 1584 aa11.72□□□□□ -0.53
PKP4-210ENST00000480171 CNGB1Q14028 1251 aaPredicted RBP11.72□□□□□ -0.53
PKP4-210ENST00000480171 C9orf84Q5VXU9 1444 aa11.72□□□□□ -0.53
PKP4-210ENST00000480171 KTN1Q86UP2 1357 aaKnown RBP11.71□□□□□ -0.53
PKP4-210ENST00000480171 KIF15Q9NS87 1388 aa11.71□□□□□ -0.53
PKP4-210ENST00000480171 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
PKP4-210ENST00000480171 MYT1LQ9UL68 1186 aa11.71□□□□□ -0.54
PKP4-210ENST00000480171 FBLN2P98095 1184 aa11.7□□□□□ -0.54
PKP4-210ENST00000480171 KDM5DQ9BY66 1539 aa11.7□□□□□ -0.54
PKP4-210ENST00000480171 RNF123Q5XPI4 1314 aa11.7□□□□□ -0.54
PKP4-210ENST00000480171 PLCB2Q00722 1185 aa11.7□□□□□ -0.54
PKP4-210ENST00000480171 PNISRQ8TF01 805 aaKnown RBP11.7□□□□□ -0.54
PKP4-210ENST00000480171 PDIA4P13667 645 aaKnown RBP11.69□□□□□ -0.54
PKP4-210ENST00000480171 CDC42BPAQ5VT25 1732 aa11.69□□□□□ -0.54
PKP4-210ENST00000480171 CCDC136Q96JN2 1154 aa11.69□□□□□ -0.54
PKP4-210ENST00000480171 RALBP1Q15311 655 aa11.68□□□□□ -0.54
PKP4-210ENST00000480171 ABCC10Q5T3U5 1492 aa11.68□□□□□ -0.54
PKP4-210ENST00000480171 HAP1P54257 671 aaPredicted RBP11.68□□□□□ -0.54
PKP4-210ENST00000480171 NUP160Q12769 1436 aa11.68□□□□□ -0.54
PKP4-210ENST00000480171 ERCC6Q03468 1493 aa11.68□□□□□ -0.54
PKP4-210ENST00000480171 BRD4O60885 1362 aaPredicted RBP11.67□□□□□ -0.54
PKP4-210ENST00000480171 MYBBP1AQ9BQG0 1328 aaKnown RBP11.67□□□□□ -0.54
PKP4-210ENST00000480171 ABCA8O94911 1581 aa11.67□□□□□ -0.54
PKP4-210ENST00000480171 KDM2AQ9Y2K7 1162 aa11.67□□□□□ -0.54
PKP4-210ENST00000480171 DCAF11Q8TEB1 546 aa11.66□□□□□ -0.54
PKP4-210ENST00000480171 ATP10BO94823 1461 aa11.66□□□□□ -0.54
PKP4-210ENST00000480171 ST20-MTHFSA0A0A6YYL1 179 aa11.66□□□□□ -0.54
PKP4-210ENST00000480171 ARHGEF5Q12774 1597 aa11.65□□□□□ -0.54
PKP4-210ENST00000480171 PTPRGP23470 1445 aa11.65□□□□□ -0.54
PKP4-210ENST00000480171 LRPPRCP42704 1394 aaKnown RBP11.64□□□□□ -0.55
PKP4-210ENST00000480171 RSPH4AQ5TD94 716 aa11.64□□□□□ -0.55
PKP4-210ENST00000480171 HNRNPMP52272 730 aaKnown RBP eCLIP11.63□□□□□ -0.55
PKP4-210ENST00000480171 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
PKP4-210ENST00000480171 CCDC141Q6ZP82 1450 aa11.62□□□□□ -0.55
PKP4-210ENST00000480171 ANP32AP39687 249 aaKnown RBP11.62□□□□□ -0.55
PKP4-210ENST00000480171 TMEM132AQ24JP5 1023 aa11.62□□□□□ -0.55
PKP4-210ENST00000480171 E9PCH4 1651 aa11.61□□□□□ -0.55
PKP4-210ENST00000480171 NLRP13Q86W25 1043 aa11.61□□□□□ -0.55
PKP4-210ENST00000480171 CCDC144AA2RUR9 1427 aa11.61□□□□□ -0.55
PKP4-210ENST00000480171 PDE3BQ13370 1112 aa11.6□□□□□ -0.55
PKP4-210ENST00000480171 FAM135AQ9P2D6 1515 aa11.6□□□□□ -0.55
PKP4-210ENST00000480171 PRAG1Q86YV5 1406 aa11.58□□□□□ -0.55
PKP4-210ENST00000480171 RRP1P56182 461 aaKnown RBP11.58□□□□□ -0.56
PKP4-210ENST00000480171 CHMP4AQ9BY43 222 aa11.58□□□□□ -0.56
PKP4-210ENST00000480171 TRPM1Q7Z4N2 1603 aa11.58□□□□□ -0.56
PKP4-210ENST00000480171 WASHC2CQ9Y4E1 1318 aa11.57□□□□□ -0.56
PKP4-210ENST00000480171 PARD3Q8TEW0 1356 aa11.57□□□□□ -0.56
PKP4-210ENST00000480171 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
PKP4-210ENST00000480171 RCAN3Q9UKA8 241 aa11.57□□□□□ -0.56
PKP4-210ENST00000480171 PREX2Q70Z35 1606 aa11.57□□□□□ -0.56
PKP4-210ENST00000480171 SAMD9LQ8IVG5 1584 aa11.57□□□□□ -0.56
PKP4-210ENST00000480171 IPO9Q96P70 1041 aaKnown RBP11.56□□□□□ -0.56
PKP4-210ENST00000480171 DHX37Q8IY37 1157 aaKnown RBP11.56□□□□□ -0.56
PKP4-210ENST00000480171 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
PKP4-210ENST00000480171 LAMC1P11047 1609 aa11.55□□□□□ -0.56
PKP4-210ENST00000480171 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
PKP4-210ENST00000480171 UBE2Q2Q8WVN8 375 aa11.55□□□□□ -0.56
PKP4-210ENST00000480171 ZBTB47Q9UFB7 747 aaPredicted RBP11.55□□□□□ -0.56
PKP4-210ENST00000480171 RGL3Q3MIN7 710 aa11.54□□□□□ -0.56
PKP4-210ENST00000480171 INSRP06213 1382 aa11.54□□□□□ -0.56
PKP4-210ENST00000480171 UNC13BO14795 1591 aa11.54□□□□□ -0.56
PKP4-210ENST00000480171 MAST1Q9Y2H9 1570 aa11.54□□□□□ -0.56
PKP4-210ENST00000480171 TCERG1O14776 1098 aaKnown RBP11.54□□□□□ -0.56
PKP4-210ENST00000480171 EIF2AK4Q9P2K8 1649 aaKnown RBP11.54□□□□□ -0.56
PKP4-210ENST00000480171 COL17A1Q9UMD9 1497 aaPredicted RBP11.53□□□□□ -0.56
PKP4-210ENST00000480171 ZMYM4Q5VZL5 1548 aa11.52□□□□□ -0.56
PKP4-210ENST00000480171 EXOC6Q8TAG9 804 aa11.52□□□□□ -0.56
PKP4-210ENST00000480171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.52□□□□□ -0.569e-7■■□□□ 12.1
PKP4-210ENST00000480171 PLEKHH2Q8IVE3 1493 aa11.52□□□□□ -0.57
PKP4-210ENST00000480171 ARHGAP5Q13017 1502 aa11.52□□□□□ -0.57
PKP4-210ENST00000480171 PER1O15534 1290 aaPredicted RBP11.52□□□□□ -0.57
PKP4-210ENST00000480171 TMF1P82094 1093 aa11.52□□□□□ -0.57
PKP4-210ENST00000480171 NBPF1Q3BBV0 1214 aa11.52□□□□□ -0.57
PKP4-210ENST00000480171 SALL2Q9Y467 1007 aaPredicted RBP11.52□□□□□ -0.57
PKP4-210ENST00000480171 SYCP2Q9BX26 1530 aa11.52□□□□□ -0.57
PKP4-210ENST00000480171 PAK3O75914 559 aaPredicted RBP11.51□□□□□ -0.57
PKP4-210ENST00000480171 A2MP01023 1474 aa11.51□□□□□ -0.57
PKP4-210ENST00000480171 PRDM15P57071 1507 aaPredicted RBP11.51□□□□□ -0.57
PKP4-210ENST00000480171 DEKP35659 375 aaKnown RBP11.51□□□□□ -0.57
PKP4-210ENST00000480171 ERBINQ96RT1 1412 aa11.51□□□□□ -0.57
PKP4-210ENST00000480171 IQGAP3Q86VI3 1631 aa11.5□□□□□ -0.57
PKP4-210ENST00000480171 PLA2R1Q13018 1463 aa11.5□□□□□ -0.57
PKP4-210ENST00000480171 PLXNC1O60486 1568 aa11.5□□□□□ -0.57
PKP4-210ENST00000480171 MS4A1P11836 297 aa11.5□□□□□ -0.57
PKP4-210ENST00000480171 PDE4CQ08493 712 aa11.5□□□□□ -0.57
PKP4-210ENST00000480171 NBR1Q14596 966 aa11.49□□□□□ -0.57
PKP4-210ENST00000480171 RTL5Q5HYW3 569 aaPredicted RBP11.49□□□□□ -0.57
PKP4-210ENST00000480171 CC2D1BQ5T0F9 858 aaKnown RBP11.49□□□□□ -0.57
PKP4-210ENST00000480171 TESK2Q96S53 571 aa11.49□□□□□ -0.57
PKP4-210ENST00000480171 PANK3Q9H999 370 aa11.49□□□□□ -0.57
PKP4-210ENST00000480171 BLMP54132 1417 aaPredicted RBP11.48□□□□□ -0.57
PKP4-210ENST00000480171 DUOX2Q9NRD8 1548 aa11.48□□□□□ -0.57
PKP4-210ENST00000480171 DISP3Q9P2K9 1392 aa11.48□□□□□ -0.57
PKP4-210ENST00000480171 ATP10AO60312 1499 aa11.48□□□□□ -0.57
PKP4-210ENST00000480171 MYO5CQ9NQX4 1742 aa11.48□□□□□ -0.57
PKP4-210ENST00000480171 TTC37Q6PGP7 1564 aa11.47□□□□□ -0.57
PKP4-210ENST00000480171 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
PKP4-210ENST00000480171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.46□□□□□ -0.57
PKP4-210ENST00000480171 CDCA7LQ96GN5 454 aa11.46□□□□□ -0.58
PKP4-210ENST00000480171 PDE4AP27815 886 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms