RNA–Protein interactions for RNA: ENST00000478576.5

GFM1-208, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2 BASIC

Gene GFM1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-208ENST00000478576 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
GFM1-208ENST00000478576 CARD11Q9BXL7 1154 aa22.28■■□□□ 1.16
GFM1-208ENST00000478576 LAMC1P11047 1609 aa22.24■■□□□ 1.15
GFM1-208ENST00000478576 RBM19Q9Y4C8 960 aaKnown RBP22.24■■□□□ 1.15
GFM1-208ENST00000478576 KTN1Q86UP2 1357 aaKnown RBP22.23■■□□□ 1.15
GFM1-208ENST00000478576 CCDC144AA2RUR9 1427 aa22.23■■□□□ 1.15
GFM1-208ENST00000478576 PRAG1Q86YV5 1406 aa22.23■■□□□ 1.15
GFM1-208ENST00000478576 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
GFM1-208ENST00000478576 MAGI2Q86UL8 1455 aa22.22■■□□□ 1.15
GFM1-208ENST00000478576 PPP4R2Q9NY27 417 aa22.22■■□□□ 1.15
GFM1-208ENST00000478576 SMG6Q86US8 1419 aaKnown RBP22.21■■□□□ 1.15
GFM1-208ENST00000478576 DUOX2Q9NRD8 1548 aa22.21■■□□□ 1.15
GFM1-208ENST00000478576 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
GFM1-208ENST00000478576 PLA2R1Q13018 1463 aa22.21■■□□□ 1.15
GFM1-208ENST00000478576 ATP10AO60312 1499 aa22.2■■□□□ 1.14
GFM1-208ENST00000478576 ST20-MTHFSA0A0A6YYL1 179 aa22.19■■□□□ 1.14
GFM1-208ENST00000478576 IRX6P78412 446 aaPredicted RBP22.19■■□□□ 1.14
GFM1-208ENST00000478576 KDM2AQ9Y2K7 1162 aa22.19■■□□□ 1.14
GFM1-208ENST00000478576 GPRASP1Q5JY77 1395 aa22.19■■□□□ 1.14
GFM1-208ENST00000478576 UHRF1BP1LA0JNW5 1464 aa22.17■■□□□ 1.14
GFM1-208ENST00000478576 ERBINQ96RT1 1412 aa22.17■■□□□ 1.14
GFM1-208ENST00000478576 POLR3GLQ9BT43 218 aa22.16■■□□□ 1.14
GFM1-208ENST00000478576 ZCCHC11Q5TAX3 1644 aaKnown RBP22.16■■□□□ 1.14
GFM1-208ENST00000478576 PLCH2O75038 1416 aa22.16■■□□□ 1.14
GFM1-208ENST00000478576 EIF2AK4Q9P2K8 1649 aaKnown RBP22.15■■□□□ 1.14
GFM1-208ENST00000478576 PNISRQ8TF01 805 aaKnown RBP22.15■■□□□ 1.14
GFM1-208ENST00000478576 A2MP01023 1474 aa22.15■■□□□ 1.14
GFM1-208ENST00000478576 CLASP1Q7Z460 1538 aa22.14■■□□□ 1.14
GFM1-208ENST00000478576 PRDM15P57071 1507 aaPredicted RBP22.14■■□□□ 1.13
GFM1-208ENST00000478576 BRD4O60885 1362 aaPredicted RBP22.13■■□□□ 1.13
GFM1-208ENST00000478576 LRPPRCP42704 1394 aaKnown RBP22.13■■□□□ 1.13
GFM1-208ENST00000478576 RALBP1Q15311 655 aa22.13■■□□□ 1.13
GFM1-208ENST00000478576 ANP32EQ9BTT0 268 aa22.13■■□□□ 1.13
GFM1-208ENST00000478576 ABCC1P33527 1531 aa22.12■■□□□ 1.13
GFM1-208ENST00000478576 RNF123Q5XPI4 1314 aa22.11■■□□□ 1.13
GFM1-208ENST00000478576 NUDCQ9Y266 331 aa22.1■■□□□ 1.13
GFM1-208ENST00000478576 MYBBP1AQ9BQG0 1328 aaKnown RBP22.1■■□□□ 1.13
GFM1-208ENST00000478576 TMC1Q8TDI8 760 aa22.09■■□□□ 1.13
GFM1-208ENST00000478576 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.13
GFM1-208ENST00000478576 COL17A1Q9UMD9 1497 aaPredicted RBP22.07■■□□□ 1.12
GFM1-208ENST00000478576 RNF17Q9BXT8 1623 aaKnown RBP22.07■■□□□ 1.12
GFM1-208ENST00000478576 EFCAB2Q5VUJ9 269 aa22.06■■□□□ 1.12
GFM1-208ENST00000478576 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
GFM1-208ENST00000478576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.03■■□□□ 1.125e-6■□□□□ 8.1
GFM1-208ENST00000478576 NBPF1Q3BBV0 1214 aa22.03■■□□□ 1.12
GFM1-208ENST00000478576 RTEL1-TNFRSF6BF6WH68 1400 aa22.02■■□□□ 1.12
GFM1-208ENST00000478576 FANCIQ9NVI1 1328 aa22.02■■□□□ 1.12
GFM1-208ENST00000478576 WASHC2CQ9Y4E1 1318 aa22.01■■□□□ 1.11
GFM1-208ENST00000478576 RGL3Q3MIN7 710 aa22.01■■□□□ 1.11
GFM1-208ENST00000478576 TRAPPC8Q9Y2L5 1435 aa22.01■■□□□ 1.11
GFM1-208ENST00000478576 PER1O15534 1290 aaPredicted RBP22■■□□□ 1.11
GFM1-208ENST00000478576 CNGB1Q14028 1251 aaPredicted RBP22■■□□□ 1.11
GFM1-208ENST00000478576 TESK2Q96S53 571 aa22■■□□□ 1.11
GFM1-208ENST00000478576 DEPDC5O75140 1603 aa21.99■■□□□ 1.11
GFM1-208ENST00000478576 NLRP13Q86W25 1043 aa21.98■■□□□ 1.11
GFM1-208ENST00000478576 CEP152O94986 1710 aa21.97■■□□□ 1.11
GFM1-208ENST00000478576 ZMYM4Q5VZL5 1548 aa21.97■■□□□ 1.11
GFM1-208ENST00000478576 ZFYVE16Q7Z3T8 1539 aa21.97■■□□□ 1.11
GFM1-208ENST00000478576 B4GALNT3Q6L9W6 998 aa21.97■■□□□ 1.11
GFM1-208ENST00000478576 INSRP06213 1382 aa21.97■■□□□ 1.11
GFM1-208ENST00000478576 TRPM2O94759 1503 aa21.96■■□□□ 1.11
GFM1-208ENST00000478576 MADDQ8WXG6 1647 aa21.96■■□□□ 1.11
GFM1-208ENST00000478576 SPHKAPQ2M3C7 1700 aa21.95■■□□□ 1.1
GFM1-208ENST00000478576 IQGAP1P46940 1657 aa21.95■■□□□ 1.1
GFM1-208ENST00000478576 DISP3Q9P2K9 1392 aa21.95■■□□□ 1.1
GFM1-208ENST00000478576 TET3O43151 1660 aa21.93■■□□□ 1.1
GFM1-208ENST00000478576 PTPRTO14522 1441 aa21.92■■□□□ 1.1
GFM1-208ENST00000478576 ABCA9Q8IUA7 1624 aa21.92■■□□□ 1.1
GFM1-208ENST00000478576 STAC3Q96MF2 364 aa21.91■■□□□ 1.1
GFM1-208ENST00000478576 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
GFM1-208ENST00000478576 VWDEQ8N2E2 1590 aa21.9■■□□□ 1.1
GFM1-208ENST00000478576 NEURL4Q96JN8 1562 aa21.9■■□□□ 1.1
GFM1-208ENST00000478576 SPAG9O60271 1321 aaKnown RBP21.9■■□□□ 1.1
GFM1-208ENST00000478576 TMF1P82094 1093 aa21.89■■□□□ 1.1
GFM1-208ENST00000478576 PDE3BQ13370 1112 aa21.88■■□□□ 1.09
GFM1-208ENST00000478576 CLTCL1P53675 1640 aa21.87■■□□□ 1.09
GFM1-208ENST00000478576 WDR7Q9Y4E6 1490 aa21.87■■□□□ 1.09
GFM1-208ENST00000478576 MSH5O43196 834 aa21.87■■□□□ 1.09
GFM1-208ENST00000478576 SCAPERQ9BY12 1400 aa21.87■■□□□ 1.09
GFM1-208ENST00000478576 KIAA1210Q9ULL0 1709 aa21.86■■□□□ 1.09
GFM1-208ENST00000478576 ATP7AQ04656 1500 aa21.86■■□□□ 1.09
GFM1-208ENST00000478576 BLMP54132 1417 aaPredicted RBP21.85■■□□□ 1.09
GFM1-208ENST00000478576 PANK3Q9H999 370 aa21.83■■□□□ 1.09
GFM1-208ENST00000478576 AFAP1Q8N556 730 aa21.82■■□□□ 1.08
GFM1-208ENST00000478576 FANCAO15360 1455 aa21.81■■□□□ 1.08
GFM1-208ENST00000478576 SYNMO15061 1565 aa21.81■■□□□ 1.08
GFM1-208ENST00000478576 SCAF11Q99590 1463 aaKnown RBP21.8■■□□□ 1.08
GFM1-208ENST00000478576 CCDC136Q96JN2 1154 aa21.8■■□□□ 1.08
GFM1-208ENST00000478576 MROH1Q8NDA8 1641 aa21.78■■□□□ 1.08
GFM1-208ENST00000478576 KANK1Q14678 1352 aa21.78■■□□□ 1.08
GFM1-208ENST00000478576 RRP1P56182 461 aaKnown RBP21.77■■□□□ 1.08
GFM1-208ENST00000478576 CC2D1BQ5T0F9 858 aaKnown RBP21.77■■□□□ 1.08
GFM1-208ENST00000478576 RCAN3Q9UKA8 241 aa21.76■■□□□ 1.07
GFM1-208ENST00000478576 MYOM1P52179 1685 aa21.75■■□□□ 1.07
GFM1-208ENST00000478576 SENP3-EIF4A1A0A087X0R7 540 aa21.75■■□□□ 1.07
GFM1-208ENST00000478576 CDCA8Q53HL2 280 aa21.75■■□□□ 1.07
GFM1-208ENST00000478576 ADGRL1O94910 1474 aa21.74■■□□□ 1.07
GFM1-208ENST00000478576 MYOM2P54296 1465 aa21.73■■□□□ 1.07
GFM1-208ENST00000478576 IFT172Q9UG01 1749 aa21.73■■□□□ 1.07
GFM1-208ENST00000478576 KIF1BO60333 1816 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms