RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 RALGAPBQ86X10 1494 aa28.51■■■□□ 2.15
TMED4-204ENST00000477639 TTC37Q6PGP7 1564 aa28.5■■■□□ 2.15
TMED4-204ENST00000477639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.49■■■□□ 2.152e-7■■■■□ 26.2
TMED4-204ENST00000477639 MAST1Q9Y2H9 1570 aa28.49■■■□□ 2.15
TMED4-204ENST00000477639 ZNF326Q5BKZ1 582 aaKnown RBP28.49■■■□□ 2.15
TMED4-204ENST00000477639 ARID4BQ4LE39 1312 aaPredicted RBP28.46■■■□□ 2.15
TMED4-204ENST00000477639 SYCP2Q9BX26 1530 aa28.46■■■□□ 2.15
TMED4-204ENST00000477639 FAM135AQ9P2D6 1515 aa28.46■■■□□ 2.15
TMED4-204ENST00000477639 ARHGAP5Q13017 1502 aa28.45■■■□□ 2.14
TMED4-204ENST00000477639 DHX29Q7Z478 1369 aaKnown RBP28.45■■■□□ 2.14
TMED4-204ENST00000477639 ABCA9Q8IUA7 1624 aa28.44■■■□□ 2.14
TMED4-204ENST00000477639 MRS2Q9HD23 443 aa28.43■■■□□ 2.14
TMED4-204ENST00000477639 UNC13BO14795 1591 aa28.39■■■□□ 2.14
TMED4-204ENST00000477639 PLEKHH2Q8IVE3 1493 aa28.39■■■□□ 2.13
TMED4-204ENST00000477639 MYO5CQ9NQX4 1742 aa28.38■■■□□ 2.13
TMED4-204ENST00000477639 FAM9BQ8IZU0 186 aa28.37■■■□□ 2.13
TMED4-204ENST00000477639 CARD11Q9BXL7 1154 aa28.37■■■□□ 2.13
TMED4-204ENST00000477639 PLXNC1O60486 1568 aa28.36■■■□□ 2.13
TMED4-204ENST00000477639 DCAF11Q8TEB1 546 aa28.35■■■□□ 2.13
TMED4-204ENST00000477639 KDM2AQ9Y2K7 1162 aa28.34■■■□□ 2.13
TMED4-204ENST00000477639 ROCK2O75116 1388 aaKnown RBP28.32■■■□□ 2.12
TMED4-204ENST00000477639 COL17A1Q9UMD9 1497 aaPredicted RBP28.32■■■□□ 2.12
TMED4-204ENST00000477639 ZBED9Q6R2W3 1325 aa28.31■■■□□ 2.12
TMED4-204ENST00000477639 PLA2R1Q13018 1463 aa28.3■■■□□ 2.12
TMED4-204ENST00000477639 PLCH2O75038 1416 aa28.3■■■□□ 2.12
TMED4-204ENST00000477639 CCDC144AA2RUR9 1427 aa28.28■■■□□ 2.12
TMED4-204ENST00000477639 IQGAP3Q86VI3 1631 aa28.28■■■□□ 2.12
TMED4-204ENST00000477639 POLR3GLQ9BT43 218 aa28.28■■■□□ 2.12
TMED4-204ENST00000477639 DUOX2Q9NRD8 1548 aa28.27■■■□□ 2.12
TMED4-204ENST00000477639 ST20-MTHFSA0A0A6YYL1 179 aa28.26■■■□□ 2.11
TMED4-204ENST00000477639 PRAG1Q86YV5 1406 aa28.25■■■□□ 2.11
TMED4-204ENST00000477639 MAGI2Q86UL8 1455 aa28.23■■■□□ 2.11
TMED4-204ENST00000477639 TRPM1Q7Z4N2 1603 aa28.22■■■□□ 2.11
TMED4-204ENST00000477639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.22■■■□□ 2.114e-8■□□□□ 8.8
TMED4-204ENST00000477639 ERBINQ96RT1 1412 aa28.22■■■□□ 2.11
TMED4-204ENST00000477639 EFCAB2Q5VUJ9 269 aa28.21■■■□□ 2.11
TMED4-204ENST00000477639 ERICH6BQ5W0A0 696 aa28.19■■■□□ 2.1
TMED4-204ENST00000477639 FANCAO15360 1455 aa28.19■■■□□ 2.1
TMED4-204ENST00000477639 NEO1Q92859 1461 aa28.19■■■□□ 2.1
TMED4-204ENST00000477639 ATP10AO60312 1499 aa28.19■■■□□ 2.1
TMED4-204ENST00000477639 ABCC1P33527 1531 aa28.19■■■□□ 2.1
TMED4-204ENST00000477639 A2MP01023 1474 aa28.18■■■□□ 2.1
TMED4-204ENST00000477639 IRX6P78412 446 aaPredicted RBP28.16■■■□□ 2.1
TMED4-204ENST00000477639 GPRASP1Q5JY77 1395 aa28.16■■■□□ 2.1
TMED4-204ENST00000477639 ARAP3Q8WWN8 1544 aa28.15■■■□□ 2.1
TMED4-204ENST00000477639 E9PCH4 1651 aa28.15■■■□□ 2.1
TMED4-204ENST00000477639 CFAP74Q9C0B2 1584 aa28.14■■■□□ 2.09
TMED4-204ENST00000477639 TRAPPC8Q9Y2L5 1435 aa28.14■■■□□ 2.09
TMED4-204ENST00000477639 RGL3Q3MIN7 710 aa28.13■■■□□ 2.09
TMED4-204ENST00000477639 LAMC1P11047 1609 aa28.12■■■□□ 2.09
TMED4-204ENST00000477639 RAPGEF3O95398 923 aa28.12■■■□□ 2.09
TMED4-204ENST00000477639 CNGB1Q14028 1251 aaPredicted RBP28.11■■■□□ 2.09
TMED4-204ENST00000477639 NBPF1Q3BBV0 1214 aa28.1■■■□□ 2.09
TMED4-204ENST00000477639 KTN1Q86UP2 1357 aaKnown RBP28.1■■■□□ 2.09
TMED4-204ENST00000477639 PNISRQ8TF01 805 aaKnown RBP28.1■■■□□ 2.09
TMED4-204ENST00000477639 SMG6Q86US8 1419 aaKnown RBP28.07■■■□□ 2.08
TMED4-204ENST00000477639 MYT1Q01538 1121 aa28.06■■■□□ 2.08
TMED4-204ENST00000477639 PRDM15P57071 1507 aaPredicted RBP28.06■■■□□ 2.08
TMED4-204ENST00000477639 RTEL1-TNFRSF6BF6WH68 1400 aa28.05■■■□□ 2.08
TMED4-204ENST00000477639 RALBP1Q15311 655 aa28.05■■■□□ 2.08
TMED4-204ENST00000477639 ADGRL1O94910 1474 aa28.05■■■□□ 2.08
TMED4-204ENST00000477639 EIF2AK4Q9P2K8 1649 aaKnown RBP28.05■■■□□ 2.08
TMED4-204ENST00000477639 PPP4R2Q9NY27 417 aa28.04■■■□□ 2.08
TMED4-204ENST00000477639 TMC1Q8TDI8 760 aa28.03■■■□□ 2.08
TMED4-204ENST00000477639 BRD4O60885 1362 aaPredicted RBP28.03■■■□□ 2.08
TMED4-204ENST00000477639 MYBBP1AQ9BQG0 1328 aaKnown RBP28.02■■■□□ 2.08
TMED4-204ENST00000477639 FRMPD1Q5SYB0 1578 aa28.02■■■□□ 2.08
TMED4-204ENST00000477639 SPAG9O60271 1321 aaKnown RBP28.02■■■□□ 2.08
TMED4-204ENST00000477639 SCAPERQ9BY12 1400 aa28.01■■■□□ 2.07
TMED4-204ENST00000477639 RBM19Q9Y4C8 960 aaKnown RBP28■■■□□ 2.07
TMED4-204ENST00000477639 LRPPRCP42704 1394 aaKnown RBP28■■■□□ 2.07
TMED4-204ENST00000477639 ZFYVE16Q7Z3T8 1539 aa28■■■□□ 2.07
TMED4-204ENST00000477639 TESK2Q96S53 571 aa27.99■■■□□ 2.07
TMED4-204ENST00000477639 RICTORQ6R327 1708 aa27.99■■■□□ 2.07
TMED4-204ENST00000477639 AFAP1Q8N556 730 aa27.98■■■□□ 2.07
TMED4-204ENST00000477639 NUDCQ9Y266 331 aa27.97■■■□□ 2.07
TMED4-204ENST00000477639 PER1O15534 1290 aaPredicted RBP27.95■■■□□ 2.06
TMED4-204ENST00000477639 PARD3Q8TEW0 1356 aa27.94■■■□□ 2.06
TMED4-204ENST00000477639 RNF17Q9BXT8 1623 aaKnown RBP27.93■■■□□ 2.06
TMED4-204ENST00000477639 DISP3Q9P2K9 1392 aa27.93■■■□□ 2.06
TMED4-204ENST00000477639 DEPDC5O75140 1603 aa27.92■■■□□ 2.06
TMED4-204ENST00000477639 POGZQ7Z3K3 1410 aa27.92■■■□□ 2.06
TMED4-204ENST00000477639 PTPRTO14522 1441 aa27.92■■■□□ 2.06
TMED4-204ENST00000477639 TRPM2O94759 1503 aa27.92■■■□□ 2.06
TMED4-204ENST00000477639 RNF123Q5XPI4 1314 aa27.91■■■□□ 2.06
TMED4-204ENST00000477639 INO80Q9ULG1 1556 aaPredicted RBP27.89■■■□□ 2.05
TMED4-204ENST00000477639 WASHC2CQ9Y4E1 1318 aa27.87■■■□□ 2.05
TMED4-204ENST00000477639 NLRP13Q86W25 1043 aa27.87■■■□□ 2.05
TMED4-204ENST00000477639 MADDQ8WXG6 1647 aa27.87■■■□□ 2.05
TMED4-204ENST00000477639 ATP7AQ04656 1500 aa27.87■■■□□ 2.05
TMED4-204ENST00000477639 VWDEQ8N2E2 1590 aa27.85■■■□□ 2.05
TMED4-204ENST00000477639 ZMYM4Q5VZL5 1548 aa27.85■■■□□ 2.05
TMED4-204ENST00000477639 TMF1P82094 1093 aa27.85■■■□□ 2.05
TMED4-204ENST00000477639 SPHKAPQ2M3C7 1700 aa27.85■■■□□ 2.05
TMED4-204ENST00000477639 TET3O43151 1660 aa27.84■■■□□ 2.05
TMED4-204ENST00000477639 ZNF518AQ6AHZ1 1483 aa27.84■■■□□ 2.05
TMED4-204ENST00000477639 CEP152O94986 1710 aa27.84■■■□□ 2.05
TMED4-204ENST00000477639 AEBP2Q6ZN18 517 aaPredicted RBP27.83■■■□□ 2.05
TMED4-204ENST00000477639 MYT1LQ9UL68 1186 aa27.83■■■□□ 2.05
TMED4-204ENST00000477639 KDM4FA0A1W2PPD8 638 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms