RNA–Protein interactions for RNA: ENST00000477613.6

RPL13A-208, Transcript of ribosomal protein L13a, humanhuman

TSL 5

Gene RPL13A, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-208ENST00000477613 KDM5DQ9BY66 1539 aa27.16■■□□□ 1.94
RPL13A-208ENST00000477613 DUOX2Q9NRD8 1548 aa27.16■■□□□ 1.94
RPL13A-208ENST00000477613 RNF17Q9BXT8 1623 aaKnown RBP27.15■■□□□ 1.94
RPL13A-208ENST00000477613 KIF15Q9NS87 1388 aa27.11■■□□□ 1.93
RPL13A-208ENST00000477613 PTPRKQ15262 1439 aa27.1■■□□□ 1.93
RPL13A-208ENST00000477613 ERBINQ96RT1 1412 aa27.07■■□□□ 1.92
RPL13A-208ENST00000477613 WASHC2CQ9Y4E1 1318 aa27.07■■□□□ 1.92
RPL13A-208ENST00000477613 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
RPL13A-208ENST00000477613 ANKRD30AQ9BXX3 1397 aa27.06■■□□□ 1.92
RPL13A-208ENST00000477613 ZC3H13Q5T200 1668 aaKnown RBP27.05■■□□□ 1.92
RPL13A-208ENST00000477613 MROH1Q8NDA8 1641 aa27.05■■□□□ 1.92
RPL13A-208ENST00000477613 MYO3AQ8NEV4 1616 aa27.05■■□□□ 1.92
RPL13A-208ENST00000477613 RRP7BPQ9NSQ0 103 aa27.04■■□□□ 1.92
RPL13A-208ENST00000477613 PZPP20742 1482 aa27.04■■□□□ 1.92
RPL13A-208ENST00000477613 ADGRL2O95490 1459 aa27.03■■□□□ 1.92
RPL13A-208ENST00000477613 ZNF142P52746 1687 aaPredicted RBP27.02■■□□□ 1.92
RPL13A-208ENST00000477613 ABCC3O15438 1527 aa27.02■■□□□ 1.92
RPL13A-208ENST00000477613 CHIC2Q9UKJ5 165 aa27.01■■□□□ 1.91
RPL13A-208ENST00000477613 NCOA1Q15788 1441 aa27■■□□□ 1.91
RPL13A-208ENST00000477613 PRDM15P57071 1507 aaPredicted RBP27■■□□□ 1.91
RPL13A-208ENST00000477613 CEP170BQ9Y4F5 1589 aaPredicted RBP26.98■■□□□ 1.91
RPL13A-208ENST00000477613 STRCQ7RTU9 1775 aa26.98■■□□□ 1.91
RPL13A-208ENST00000477613 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
RPL13A-208ENST00000477613 DEPDC5O75140 1603 aa26.96■■□□□ 1.91
RPL13A-208ENST00000477613 CEP152O94986 1710 aa26.95■■□□□ 1.9
RPL13A-208ENST00000477613 TNRQ92752 1358 aa26.95■■□□□ 1.9
RPL13A-208ENST00000477613 CAMSAP1Q5T5Y3 1602 aa26.93■■□□□ 1.9
RPL13A-208ENST00000477613 FBXO31Q5XUX0 539 aaPredicted RBP26.92■■□□□ 1.9
RPL13A-208ENST00000477613 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.92■■□□□ 1.9
RPL13A-208ENST00000477613 A2ML1A8K2U0 1454 aa26.92■■□□□ 1.9
RPL13A-208ENST00000477613 DMRT2Q9Y5R5 561 aa26.91■■□□□ 1.9
RPL13A-208ENST00000477613 PLA2R1Q13018 1463 aa26.88■■□□□ 1.89
RPL13A-208ENST00000477613 KANK1Q14678 1352 aa26.88■■□□□ 1.89
RPL13A-208ENST00000477613 SPATA31D1Q6ZQQ2 1576 aa26.88■■□□□ 1.89
RPL13A-208ENST00000477613 NLRP1Q9C000 1473 aa26.87■■□□□ 1.89
RPL13A-208ENST00000477613 PTPRTO14522 1441 aa26.86■■□□□ 1.89
RPL13A-208ENST00000477613 ANKRD50Q9ULJ7 1429 aa26.86■■□□□ 1.89
RPL13A-208ENST00000477613 ERVK-7P63135 1459 aa26.86■■□□□ 1.89
RPL13A-208ENST00000477613 ROCK1Q13464 1354 aa26.85■■□□□ 1.89
RPL13A-208ENST00000477613 ARHGAP31Q2M1Z3 1444 aa26.85■■□□□ 1.89
RPL13A-208ENST00000477613 VWDEQ8N2E2 1590 aa26.84■■□□□ 1.89
RPL13A-208ENST00000477613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.84■■□□□ 1.89
RPL13A-208ENST00000477613 LMTK2Q8IWU2 1503 aa26.83■■□□□ 1.89
RPL13A-208ENST00000477613 RRBP1Q9P2E9 1410 aaKnown RBP26.82■■□□□ 1.88
RPL13A-208ENST00000477613 PKD2Q13563 968 aa26.78■■□□□ 1.88
RPL13A-208ENST00000477613 UGGT1Q9NYU2 1555 aa26.77■■□□□ 1.88
RPL13A-208ENST00000477613 ITGAEP38570 1179 aa26.76■■□□□ 1.87
RPL13A-208ENST00000477613 NCKAP5LQ9HCH0 1330 aa26.75■■□□□ 1.87
RPL13A-208ENST00000477613 ILDR1Q86SU0 546 aaPredicted RBP26.75■■□□□ 1.87
RPL13A-208ENST00000477613 EFCAB6Q5THR3 1501 aa26.75■■□□□ 1.87
RPL13A-208ENST00000477613 CFAP65Q6ZU64 1925 aaKnown RBP26.75■■□□□ 1.87
RPL13A-208ENST00000477613 UNC13BO14795 1591 aa26.74■■□□□ 1.87
RPL13A-208ENST00000477613 THEMISQ8N1K5 641 aaPredicted RBP26.72■■□□□ 1.87
RPL13A-208ENST00000477613 POLR1AO95602 1720 aaPredicted RBP26.72■■□□□ 1.87
RPL13A-208ENST00000477613 TET3O43151 1660 aa26.68■■□□□ 1.86
RPL13A-208ENST00000477613 CERKQ8TCT0 537 aa26.67■■□□□ 1.86
RPL13A-208ENST00000477613 FBXO41Q8TF61 875 aa26.67■■□□□ 1.86
RPL13A-208ENST00000477613 RPRD2Q5VT52 1461 aaKnown RBP26.67■■□□□ 1.86
RPL13A-208ENST00000477613 NEURL4Q96JN8 1562 aa26.67■■□□□ 1.86
RPL13A-208ENST00000477613 UBR1Q8IWV7 1749 aa26.66■■□□□ 1.86
RPL13A-208ENST00000477613 GCC2Q8IWJ2 1684 aa26.64■■□□□ 1.86
RPL13A-208ENST00000477613 ANKLE2Q86XL3 938 aa26.64■■□□□ 1.86
RPL13A-208ENST00000477613 NOS1P29475 1434 aa26.64■■□□□ 1.85
RPL13A-208ENST00000477613 IQGAP3Q86VI3 1631 aa26.63■■□□□ 1.85
RPL13A-208ENST00000477613 SYNMO15061 1565 aa26.63■■□□□ 1.85
RPL13A-208ENST00000477613 LTBP4Q8N2S1 1624 aa26.62■■□□□ 1.85
RPL13A-208ENST00000477613 PIK3C2BO00750 1634 aa26.61■■□□□ 1.85
RPL13A-208ENST00000477613 MED14O60244 1454 aa26.59■■□□□ 1.85
RPL13A-208ENST00000477613 KDM5AP29375 1690 aaKnown RBP26.59■■□□□ 1.85
RPL13A-208ENST00000477613 SLIT1O75093 1534 aa26.56■■□□□ 1.84
RPL13A-208ENST00000477613 NUP155O75694 1391 aa26.56■■□□□ 1.84
RPL13A-208ENST00000477613 NPHP4O75161 1426 aaPredicted RBP26.56■■□□□ 1.84
RPL13A-208ENST00000477613 ARHGAP23Q9P227 1491 aa26.55■■□□□ 1.84
RPL13A-208ENST00000477613 ZNF335Q9H4Z2 1342 aaPredicted RBP26.55■■□□□ 1.84
RPL13A-208ENST00000477613 NAIPQ13075 1403 aa26.55■■□□□ 1.84
RPL13A-208ENST00000477613 E9PCH4 1651 aa26.54■■□□□ 1.84
RPL13A-208ENST00000477613 IQGAP1P46940 1657 aa26.54■■□□□ 1.84
RPL13A-208ENST00000477613 IDI1Q13907 227 aa26.53■■□□□ 1.84
RPL13A-208ENST00000477613 SLC52A1Q9NWF4 448 aa26.53■■□□□ 1.84
RPL13A-208ENST00000477613 ADGRB3O60242 1522 aa26.52■■□□□ 1.84
RPL13A-208ENST00000477613 IQSEC2Q5JU85 1478 aa26.52■■□□□ 1.84
RPL13A-208ENST00000477613 SCAF11Q99590 1463 aaKnown RBP26.52■■□□□ 1.84
RPL13A-208ENST00000477613 STAG3Q9UJ98 1225 aa26.52■■□□□ 1.84
RPL13A-208ENST00000477613 HFM1A2PYH4 1435 aa26.51■■□□□ 1.83
RPL13A-208ENST00000477613 TMEM2Q9UHN6 1383 aa26.49■■□□□ 1.83
RPL13A-208ENST00000477613 EID1Q9Y6B2 187 aa26.46■■□□□ 1.83
RPL13A-208ENST00000477613 TXNDC2Q86VQ3 553 aa26.45■■□□□ 1.82
RPL13A-208ENST00000477613 LTKP29376 864 aa26.44■■□□□ 1.82
RPL13A-208ENST00000477613 CPS1P31327 1500 aa26.43■■□□□ 1.82
RPL13A-208ENST00000477613 TMEM131LA2VDJ0 1609 aa26.39■■□□□ 1.82
RPL13A-208ENST00000477613 MYO5BQ9ULV0 1848 aa26.37■■□□□ 1.81
RPL13A-208ENST00000477613 SPHKAPQ2M3C7 1700 aa26.37■■□□□ 1.81
RPL13A-208ENST00000477613 ZFYVE9O95405 1425 aa26.34■■□□□ 1.81
RPL13A-208ENST00000477613 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
RPL13A-208ENST00000477613 TRIM52Q96A61 297 aa26.31■■□□□ 1.8
RPL13A-208ENST00000477613 STRCP1A6NGW2 1772 aa26.3■■□□□ 1.8
RPL13A-208ENST00000477613 CHGAP10645 457 aaKnown RBP26.3■■□□□ 1.8
RPL13A-208ENST00000477613 HDGFP51858 240 aaKnown RBP26.29■■□□□ 1.8
RPL13A-208ENST00000477613 TRPM2O94759 1503 aa26.29■■□□□ 1.8
RPL13A-208ENST00000477613 PLEKHG1Q9ULL1 1385 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms