RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 ADGBQ8N7X0 1667 aa18.35■□□□□ 0.53
LSM2-212ENST00000477182 TNRQ92752 1358 aa18.34■□□□□ 0.53
LSM2-212ENST00000477182 THEMISQ8N1K5 641 aaPredicted RBP18.34■□□□□ 0.53
LSM2-212ENST00000477182 RGS17Q9UGC6 210 aaPredicted RBP18.33■□□□□ 0.52
LSM2-212ENST00000477182 DEPDC5O75140 1603 aa18.33■□□□□ 0.52
LSM2-212ENST00000477182 MED14O60244 1454 aa18.33■□□□□ 0.52
LSM2-212ENST00000477182 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
LSM2-212ENST00000477182 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
LSM2-212ENST00000477182 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
LSM2-212ENST00000477182 RNF17Q9BXT8 1623 aaKnown RBP18.31■□□□□ 0.52
LSM2-212ENST00000477182 GPATCH8Q9UKJ3 1502 aaKnown RBP18.31■□□□□ 0.52
LSM2-212ENST00000477182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.522e-10■■□□□ 14.3
LSM2-212ENST00000477182 SYNMO15061 1565 aa18.29■□□□□ 0.52
LSM2-212ENST00000477182 PZPP20742 1482 aa18.28■□□□□ 0.52
LSM2-212ENST00000477182 CFDP1Q9UEE9 299 aaPredicted RBP18.28■□□□□ 0.52
LSM2-212ENST00000477182 LRRC7Q96NW7 1537 aa18.28■□□□□ 0.52
LSM2-212ENST00000477182 FAM135AQ9P2D6 1515 aa18.28■□□□□ 0.52
LSM2-212ENST00000477182 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
LSM2-212ENST00000477182 NLRP1Q9C000 1473 aa18.27■□□□□ 0.52
LSM2-212ENST00000477182 UGGT1Q9NYU2 1555 aa18.27■□□□□ 0.52
LSM2-212ENST00000477182 FBXO31Q5XUX0 539 aaPredicted RBP18.27■□□□□ 0.52
LSM2-212ENST00000477182 MIA2Q96PC5 1412 aa18.24■□□□□ 0.51
LSM2-212ENST00000477182 KDM5DQ9BY66 1539 aa18.24■□□□□ 0.51
LSM2-212ENST00000477182 DHX29Q7Z478 1369 aaKnown RBP18.24■□□□□ 0.51
LSM2-212ENST00000477182 STRCP1A6NGW2 1772 aa18.24■□□□□ 0.51
LSM2-212ENST00000477182 RTEL1-TNFRSF6BF6WH68 1400 aa18.23■□□□□ 0.51
LSM2-212ENST00000477182 CCNB3Q8WWL7 1395 aa18.22■□□□□ 0.51
LSM2-212ENST00000477182 WASHC2CQ9Y4E1 1318 aa18.22■□□□□ 0.51
LSM2-212ENST00000477182 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
LSM2-212ENST00000477182 POTEAQ6S8J7 498 aa18.21■□□□□ 0.51
LSM2-212ENST00000477182 KIF3BO15066 747 aa18.2■□□□□ 0.5
LSM2-212ENST00000477182 VPS8Q8N3P4 1428 aa18.16■□□□□ 0.5
LSM2-212ENST00000477182 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
LSM2-212ENST00000477182 MBD5Q9P267 1494 aa18.14■□□□□ 0.5
LSM2-212ENST00000477182 ZC3H13Q5T200 1668 aaKnown RBP18.13■□□□□ 0.49
LSM2-212ENST00000477182 XIRP1Q702N8 1843 aaKnown RBP18.1■□□□□ 0.49
LSM2-212ENST00000477182 ZNF644Q9H582 1327 aaPredicted RBP18.1■□□□□ 0.49
LSM2-212ENST00000477182 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
LSM2-212ENST00000477182 MTUS2Q5JR59 1369 aa18.09■□□□□ 0.49
LSM2-212ENST00000477182 SCAF11Q99590 1463 aaKnown RBP18.08■□□□□ 0.49
LSM2-212ENST00000477182 RSPH4AQ5TD94 716 aa18.07■□□□□ 0.48
LSM2-212ENST00000477182 TIAM1Q13009 1591 aa18.06■□□□□ 0.48
LSM2-212ENST00000477182 CCDC141Q6ZP82 1450 aa18.06■□□□□ 0.48
LSM2-212ENST00000477182 UBR1Q8IWV7 1749 aa18.04■□□□□ 0.48
LSM2-212ENST00000477182 ROBO1Q9Y6N7 1651 aa18.04■□□□□ 0.48
LSM2-212ENST00000477182 TXNDC2Q86VQ3 553 aa18.03■□□□□ 0.48
LSM2-212ENST00000477182 ERVK-7P63135 1459 aa18.02■□□□□ 0.48
LSM2-212ENST00000477182 UPF1Q92900 1129 aaKnown RBP eCLIP18.02■□□□□ 0.48
LSM2-212ENST00000477182 EID1Q9Y6B2 187 aa18.02■□□□□ 0.48
LSM2-212ENST00000477182 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
LSM2-212ENST00000477182 SLIT1O75093 1534 aa18.01■□□□□ 0.47
LSM2-212ENST00000477182 ABCC3O15438 1527 aa18■□□□□ 0.47
LSM2-212ENST00000477182 LTKP29376 864 aa18■□□□□ 0.47
LSM2-212ENST00000477182 ARHGAP23Q9P227 1491 aa18■□□□□ 0.47
LSM2-212ENST00000477182 TMEM94Q12767 1356 aa17.99■□□□□ 0.47
LSM2-212ENST00000477182 EHBP1L1Q8N3D4 1523 aa17.98■□□□□ 0.47
LSM2-212ENST00000477182 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
LSM2-212ENST00000477182 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
LSM2-212ENST00000477182 JCADQ9P266 1359 aa17.98■□□□□ 0.47
LSM2-212ENST00000477182 NCOA2Q15596 1464 aa17.97■□□□□ 0.47
LSM2-212ENST00000477182 CFAP65Q6ZU64 1925 aaKnown RBP17.97■□□□□ 0.47
LSM2-212ENST00000477182 CAMSAP2Q08AD1 1489 aa17.95■□□□□ 0.46
LSM2-212ENST00000477182 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
LSM2-212ENST00000477182 ZNF772Q68DY9 489 aaPredicted RBP17.95■□□□□ 0.46
LSM2-212ENST00000477182 KCNA6P17658 529 aa17.94■□□□□ 0.46
LSM2-212ENST00000477182 APLP2Q06481 763 aa17.94■□□□□ 0.46
LSM2-212ENST00000477182 PROSER2Q86WR7 435 aaPredicted RBP17.94■□□□□ 0.46
LSM2-212ENST00000477182 ARHGEF5Q12774 1597 aa17.93■□□□□ 0.46
LSM2-212ENST00000477182 EIF2AK4Q9P2K8 1649 aaKnown RBP17.93■□□□□ 0.46
LSM2-212ENST00000477182 MAP3K1Q13233 1512 aa17.93■□□□□ 0.46
LSM2-212ENST00000477182 TRIM52Q96A61 297 aa17.91■□□□□ 0.46
LSM2-212ENST00000477182 SPATA31A6Q5VVP1 1343 aa17.91■□□□□ 0.46
LSM2-212ENST00000477182 MSH6P52701 1360 aa17.91■□□□□ 0.46
LSM2-212ENST00000477182 CEP152O94986 1710 aa17.9■□□□□ 0.46
LSM2-212ENST00000477182 MEX3CQ5U5Q3 659 aaKnown RBP17.9■□□□□ 0.46
LSM2-212ENST00000477182 SLAIN2Q9P270 581 aa17.9■□□□□ 0.46
LSM2-212ENST00000477182 TMEM2Q9UHN6 1383 aa17.9■□□□□ 0.46
LSM2-212ENST00000477182 PRDM15P57071 1507 aaPredicted RBP17.89■□□□□ 0.45
LSM2-212ENST00000477182 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
LSM2-212ENST00000477182 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
LSM2-212ENST00000477182 ARHGAP31Q2M1Z3 1444 aa17.88■□□□□ 0.45
LSM2-212ENST00000477182 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
LSM2-212ENST00000477182 FGD6Q6ZV73 1430 aa17.87■□□□□ 0.45
LSM2-212ENST00000477182 RXRBP28702 533 aa17.86■□□□□ 0.45
LSM2-212ENST00000477182 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
LSM2-212ENST00000477182 KDM5AP29375 1690 aaKnown RBP17.86■□□□□ 0.45
LSM2-212ENST00000477182 PIK3C2BO00750 1634 aa17.85■□□□□ 0.45
LSM2-212ENST00000477182 COL16A1Q07092 1604 aaPredicted RBP17.85■□□□□ 0.45
LSM2-212ENST00000477182 KANK4Q5T7N3 995 aaPredicted RBP17.85■□□□□ 0.45
LSM2-212ENST00000477182 RBM33Q96EV2 1170 aaKnown RBP17.85■□□□□ 0.45
LSM2-212ENST00000477182 CDK12Q9NYV4 1490 aaPredicted RBP17.85■□□□□ 0.45
LSM2-212ENST00000477182 NWD1Q149M9 1564 aa17.84■□□□□ 0.45
LSM2-212ENST00000477182 PPARGC1BQ86YN6 1023 aaKnown RBP17.84■□□□□ 0.45
LSM2-212ENST00000477182 TET3O43151 1660 aa17.83■□□□□ 0.45
LSM2-212ENST00000477182 LRP6O75581 1613 aa17.83■□□□□ 0.45
LSM2-212ENST00000477182 SLC26A8Q96RN1 970 aa17.83■□□□□ 0.44
LSM2-212ENST00000477182 EFCAB6Q5THR3 1501 aa17.82■□□□□ 0.44
LSM2-212ENST00000477182 SRCAPQ6ZRS2 3230 aa17.81■□□□□ 0.44
LSM2-212ENST00000477182 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
LSM2-212ENST00000477182 DUOX2Q9NRD8 1548 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms