RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 KDM5DQ9BY66 1539 aa21.29■■□□□ 1
MSL3-213ENST00000476743 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
MSL3-213ENST00000476743 PTPRKQ15262 1439 aa21.26■□□□□ 0.99
MSL3-213ENST00000476743 MROH1Q8NDA8 1641 aa21.26■□□□□ 0.99
MSL3-213ENST00000476743 KIF15Q9NS87 1388 aa21.25■□□□□ 0.99
MSL3-213ENST00000476743 ERBINQ96RT1 1412 aa21.25■□□□□ 0.99
MSL3-213ENST00000476743 ADGRL2O95490 1459 aa21.25■□□□□ 0.99
MSL3-213ENST00000476743 HSPA2P54652 639 aa21.24■□□□□ 0.99
MSL3-213ENST00000476743 ZC3H13Q5T200 1668 aaKnown RBP21.24■□□□□ 0.99
MSL3-213ENST00000476743 NCOA1Q15788 1441 aa21.22■□□□□ 0.99
MSL3-213ENST00000476743 ANKRD30AQ9BXX3 1397 aa21.22■□□□□ 0.99
MSL3-213ENST00000476743 PZPP20742 1482 aa21.2■□□□□ 0.98
MSL3-213ENST00000476743 DEPDC5O75140 1603 aa21.2■□□□□ 0.98
MSL3-213ENST00000476743 MYO3AQ8NEV4 1616 aa21.2■□□□□ 0.98
MSL3-213ENST00000476743 ZNF142P52746 1687 aaPredicted RBP21.2■□□□□ 0.98
MSL3-213ENST00000476743 ABCC3O15438 1527 aa21.19■□□□□ 0.98
MSL3-213ENST00000476743 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
MSL3-213ENST00000476743 RRP7BPQ9NSQ0 103 aa21.19■□□□□ 0.98
MSL3-213ENST00000476743 WASHC2CQ9Y4E1 1318 aa21.19■□□□□ 0.98
MSL3-213ENST00000476743 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
MSL3-213ENST00000476743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.18■□□□□ 0.98
MSL3-213ENST00000476743 STRCQ7RTU9 1775 aa21.18■□□□□ 0.98
MSL3-213ENST00000476743 CHIC2Q9UKJ5 165 aa21.15■□□□□ 0.98
MSL3-213ENST00000476743 CEP152O94986 1710 aa21.15■□□□□ 0.98
MSL3-213ENST00000476743 CEP170BQ9Y4F5 1589 aaPredicted RBP21.14■□□□□ 0.97
MSL3-213ENST00000476743 CAMSAP1Q5T5Y3 1602 aa21.13■□□□□ 0.97
MSL3-213ENST00000476743 VWDEQ8N2E2 1590 aa21.12■□□□□ 0.97
MSL3-213ENST00000476743 PPARGC1BQ86YN6 1023 aaKnown RBP21.12■□□□□ 0.97
MSL3-213ENST00000476743 ROCK1Q13464 1354 aa21.1■□□□□ 0.97
MSL3-213ENST00000476743 SPATA31D1Q6ZQQ2 1576 aa21.1■□□□□ 0.97
MSL3-213ENST00000476743 A2ML1A8K2U0 1454 aa21.1■□□□□ 0.97
MSL3-213ENST00000476743 FBXO31Q5XUX0 539 aaPredicted RBP21.1■□□□□ 0.97
MSL3-213ENST00000476743 RRBP1Q9P2E9 1410 aaKnown RBP21.1■□□□□ 0.97
MSL3-213ENST00000476743 TNRQ92752 1358 aa21.1■□□□□ 0.97
MSL3-213ENST00000476743 ARHGAP31Q2M1Z3 1444 aa21.09■□□□□ 0.97
MSL3-213ENST00000476743 LMTK2Q8IWU2 1503 aa21.09■□□□□ 0.97
MSL3-213ENST00000476743 PLA2R1Q13018 1463 aa21.07■□□□□ 0.96
MSL3-213ENST00000476743 ANKRD50Q9ULJ7 1429 aa21.07■□□□□ 0.96
MSL3-213ENST00000476743 ERVK-7P63135 1459 aa21.06■□□□□ 0.96
MSL3-213ENST00000476743 NLRP1Q9C000 1473 aa21.06■□□□□ 0.96
MSL3-213ENST00000476743 PTPRTO14522 1441 aa21.05■□□□□ 0.96
MSL3-213ENST00000476743 DMRT2Q9Y5R5 561 aa21.04■□□□□ 0.96
MSL3-213ENST00000476743 KANK1Q14678 1352 aa21.04■□□□□ 0.96
MSL3-213ENST00000476743 UNC13BO14795 1591 aa21.02■□□□□ 0.95
MSL3-213ENST00000476743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21■□□□□ 0.95
MSL3-213ENST00000476743 CFAP65Q6ZU64 1925 aaKnown RBP21■□□□□ 0.95
MSL3-213ENST00000476743 EFCAB6Q5THR3 1501 aa20.99■□□□□ 0.95
MSL3-213ENST00000476743 UGGT1Q9NYU2 1555 aa20.97■□□□□ 0.95
MSL3-213ENST00000476743 PKD2Q13563 968 aa20.97■□□□□ 0.95
MSL3-213ENST00000476743 TET3O43151 1660 aa20.95■□□□□ 0.94
MSL3-213ENST00000476743 POLR1AO95602 1720 aaPredicted RBP20.95■□□□□ 0.94
MSL3-213ENST00000476743 GCC2Q8IWJ2 1684 aa20.93■□□□□ 0.94
MSL3-213ENST00000476743 UBR1Q8IWV7 1749 aa20.93■□□□□ 0.94
MSL3-213ENST00000476743 ITGAEP38570 1179 aa20.93■□□□□ 0.94
MSL3-213ENST00000476743 NCKAP5LQ9HCH0 1330 aa20.93■□□□□ 0.94
MSL3-213ENST00000476743 NOS1P29475 1434 aa20.93■□□□□ 0.94
MSL3-213ENST00000476743 RPRD2Q5VT52 1461 aaKnown RBP20.93■□□□□ 0.94
MSL3-213ENST00000476743 IQGAP3Q86VI3 1631 aa20.93■□□□□ 0.94
MSL3-213ENST00000476743 THEMISQ8N1K5 641 aaPredicted RBP20.92■□□□□ 0.94
MSL3-213ENST00000476743 NEURL4Q96JN8 1562 aa20.92■□□□□ 0.94
MSL3-213ENST00000476743 SYNMO15061 1565 aa20.91■□□□□ 0.94
MSL3-213ENST00000476743 KDM5AP29375 1690 aaKnown RBP20.9■□□□□ 0.94
MSL3-213ENST00000476743 PIK3C2BO00750 1634 aa20.88■□□□□ 0.93
MSL3-213ENST00000476743 LTBP4Q8N2S1 1624 aa20.88■□□□□ 0.93
MSL3-213ENST00000476743 MED14O60244 1454 aa20.88■□□□□ 0.93
MSL3-213ENST00000476743 ILDR1Q86SU0 546 aaPredicted RBP20.87■□□□□ 0.93
MSL3-213ENST00000476743 NAIPQ13075 1403 aa20.87■□□□□ 0.93
MSL3-213ENST00000476743 E9PCH4 1651 aa20.86■□□□□ 0.93
MSL3-213ENST00000476743 SLIT1O75093 1534 aa20.85■□□□□ 0.93
MSL3-213ENST00000476743 CERKQ8TCT0 537 aa20.85■□□□□ 0.93
MSL3-213ENST00000476743 ARHGAP23Q9P227 1491 aa20.85■□□□□ 0.93
MSL3-213ENST00000476743 ANKLE2Q86XL3 938 aa20.84■□□□□ 0.93
MSL3-213ENST00000476743 FBXO41Q8TF61 875 aa20.84■□□□□ 0.93
MSL3-213ENST00000476743 HFM1A2PYH4 1435 aa20.83■□□□□ 0.93
MSL3-213ENST00000476743 NUP155O75694 1391 aa20.82■□□□□ 0.92
MSL3-213ENST00000476743 IDI1Q13907 227 aa20.81■□□□□ 0.92
MSL3-213ENST00000476743 IQGAP1P46940 1657 aa20.8■□□□□ 0.92
MSL3-213ENST00000476743 NPHP4O75161 1426 aaPredicted RBP20.8■□□□□ 0.92
MSL3-213ENST00000476743 ADGRB3O60242 1522 aa20.8■□□□□ 0.92
MSL3-213ENST00000476743 SLC52A1Q9NWF4 448 aa20.8■□□□□ 0.92
MSL3-213ENST00000476743 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
MSL3-213ENST00000476743 SCAF11Q99590 1463 aaKnown RBP20.77■□□□□ 0.92
MSL3-213ENST00000476743 TMEM2Q9UHN6 1383 aa20.77■□□□□ 0.92
MSL3-213ENST00000476743 ZNF335Q9H4Z2 1342 aaPredicted RBP20.77■□□□□ 0.91
MSL3-213ENST00000476743 TMEM131LA2VDJ0 1609 aa20.74■□□□□ 0.91
MSL3-213ENST00000476743 LTKP29376 864 aa20.73■□□□□ 0.91
MSL3-213ENST00000476743 MYO5BQ9ULV0 1848 aa20.73■□□□□ 0.91
MSL3-213ENST00000476743 SPHKAPQ2M3C7 1700 aa20.72■□□□□ 0.91
MSL3-213ENST00000476743 STAG3Q9UJ98 1225 aa20.71■□□□□ 0.91
MSL3-213ENST00000476743 CPS1P31327 1500 aa20.7■□□□□ 0.9
MSL3-213ENST00000476743 TXNDC2Q86VQ3 553 aa20.7■□□□□ 0.9
MSL3-213ENST00000476743 EID1Q9Y6B2 187 aa20.69■□□□□ 0.9
MSL3-213ENST00000476743 ZFYVE9O95405 1425 aa20.68■□□□□ 0.9
MSL3-213ENST00000476743 STRCP1A6NGW2 1772 aa20.66■□□□□ 0.9
MSL3-213ENST00000476743 TRPM2O94759 1503 aa20.64■□□□□ 0.9
MSL3-213ENST00000476743 RIMS2Q9UQ26 1411 aa20.62■□□□□ 0.89
MSL3-213ENST00000476743 CLTCL1P53675 1640 aa20.6■□□□□ 0.89
MSL3-213ENST00000476743 TRIM52Q96A61 297 aa20.6■□□□□ 0.89
MSL3-213ENST00000476743 PLEKHG1Q9ULL1 1385 aa20.59■□□□□ 0.89
MSL3-213ENST00000476743 ACIN1Q9UKV3 1341 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms