RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 SHANK2Q9UPX8 1470 aa50.2■■■■■ 5.63
CHKB-207ENST00000476289 DNMT1P26358 1616 aaKnown RBP50.19■■■■■ 5.63
CHKB-207ENST00000476289 RNF17Q9BXT8 1623 aaKnown RBP50.18■■■■■ 5.62
CHKB-207ENST00000476289 MYO3AQ8NEV4 1616 aa50.18■■■■■ 5.62
CHKB-207ENST00000476289 EIF2AK4Q9P2K8 1649 aaKnown RBP50.16■■■■■ 5.62
CHKB-207ENST00000476289 DAPK1P53355 1430 aa50.16■■■■■ 5.62
CHKB-207ENST00000476289 DUOX2Q9NRD8 1548 aa50.11■■■■■ 5.61
CHKB-207ENST00000476289 ZNF142P52746 1687 aaPredicted RBP50.11■■■■■ 5.61
CHKB-207ENST00000476289 WASHC2CQ9Y4E1 1318 aa50.1■■■■■ 5.61
CHKB-207ENST00000476289 KIF15Q9NS87 1388 aa50.06■■■■■ 5.6
CHKB-207ENST00000476289 MROH1Q8NDA8 1641 aa50.06■■■■■ 5.6
CHKB-207ENST00000476289 PZPP20742 1482 aa50.06■■■■■ 5.6
CHKB-207ENST00000476289 CEP170BQ9Y4F5 1589 aaPredicted RBP50.05■■■■■ 5.6
CHKB-207ENST00000476289 NCOA1Q15788 1441 aa50.04■■■■■ 5.6
CHKB-207ENST00000476289 CAMSAP1Q5T5Y3 1602 aa50.03■■■■■ 5.6
CHKB-207ENST00000476289 ABCC3O15438 1527 aa50.01■■■■■ 5.6
CHKB-207ENST00000476289 FBXO31Q5XUX0 539 aaPredicted RBP50■■■■■ 5.59
CHKB-207ENST00000476289 RRP7BPQ9NSQ0 103 aa49.99■■■■■ 5.59
CHKB-207ENST00000476289 ZC3H13Q5T200 1668 aaKnown RBP49.98■■■■■ 5.59
CHKB-207ENST00000476289 DMRT2Q9Y5R5 561 aa49.98■■■■■ 5.59
CHKB-207ENST00000476289 ERBINQ96RT1 1412 aa49.94■■■■■ 5.59
CHKB-207ENST00000476289 TNRQ92752 1358 aa49.92■■■■■ 5.58
CHKB-207ENST00000476289 CHIC2Q9UKJ5 165 aa49.92■■■■■ 5.58
CHKB-207ENST00000476289 PTPRTO14522 1441 aa49.92■■■■■ 5.58
CHKB-207ENST00000476289 A2ML1A8K2U0 1454 aa49.9■■■■■ 5.58
CHKB-207ENST00000476289 CEP152O94986 1710 aa49.89■■■■■ 5.58
CHKB-207ENST00000476289 FAM50AQ14320 339 aaKnown RBP49.89■■■■■ 5.58
CHKB-207ENST00000476289 ANKRD30AQ9BXX3 1397 aa49.87■■■■■ 5.57
CHKB-207ENST00000476289 PRDM15P57071 1507 aaPredicted RBP49.86■■■■■ 5.57
CHKB-207ENST00000476289 FBXO41Q8TF61 875 aa49.85■■■■■ 5.57
CHKB-207ENST00000476289 PLA2R1Q13018 1463 aa49.84■■■■■ 5.57
CHKB-207ENST00000476289 DEPDC5O75140 1603 aa49.81■■■■■ 5.56
CHKB-207ENST00000476289 ADGRL2O95490 1459 aa49.81■■■■■ 5.56
CHKB-207ENST00000476289 NCKAP5LQ9HCH0 1330 aa49.79■■■■■ 5.56
CHKB-207ENST00000476289 CERKQ8TCT0 537 aa49.76■■■■■ 5.56
CHKB-207ENST00000476289 SPATA31D1Q6ZQQ2 1576 aa49.75■■■■■ 5.55
CHKB-207ENST00000476289 PPARGC1BQ86YN6 1023 aaKnown RBP49.73■■■■■ 5.55
CHKB-207ENST00000476289 ERVK-7P63135 1459 aa49.72■■■■■ 5.55
CHKB-207ENST00000476289 NLRP1Q9C000 1473 aa49.71■■■■■ 5.55
CHKB-207ENST00000476289 PKD2Q13563 968 aa49.67■■■■■ 5.54
CHKB-207ENST00000476289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP49.67■■■■■ 5.548e-8■■■□□ 18.5
CHKB-207ENST00000476289 CFAP65Q6ZU64 1925 aaKnown RBP49.63■■■■■ 5.54
CHKB-207ENST00000476289 UGGT1Q9NYU2 1555 aa49.61■■■■■ 5.53
CHKB-207ENST00000476289 ARHGAP31Q2M1Z3 1444 aa49.6■■■■■ 5.53
CHKB-207ENST00000476289 LTBP4Q8N2S1 1624 aa49.6■■■■■ 5.53
CHKB-207ENST00000476289 VWDEQ8N2E2 1590 aa49.6■■■■■ 5.53
CHKB-207ENST00000476289 KANK1Q14678 1352 aa49.58■■■■■ 5.53
CHKB-207ENST00000476289 POLR1AO95602 1720 aaPredicted RBP49.57■■■■■ 5.53
CHKB-207ENST00000476289 ANKRD50Q9ULJ7 1429 aa49.54■■■■■ 5.52
CHKB-207ENST00000476289 LMTK2Q8IWU2 1503 aa49.54■■■■■ 5.52
CHKB-207ENST00000476289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP49.53■■■■■ 5.52
CHKB-207ENST00000476289 NEURL4Q96JN8 1562 aa49.53■■■■■ 5.52
CHKB-207ENST00000476289 THEMISQ8N1K5 641 aaPredicted RBP49.49■■■■■ 5.51
CHKB-207ENST00000476289 ZNF335Q9H4Z2 1342 aaPredicted RBP49.44■■■■■ 5.51
CHKB-207ENST00000476289 ROCK1Q13464 1354 aa49.42■■■■■ 5.5
CHKB-207ENST00000476289 UBR1Q8IWV7 1749 aa49.42■■■■■ 5.5
CHKB-207ENST00000476289 EFCAB6Q5THR3 1501 aa49.41■■■■■ 5.5
CHKB-207ENST00000476289 ANKLE2Q86XL3 938 aa49.39■■■■■ 5.5
CHKB-207ENST00000476289 ITGAEP38570 1179 aa49.36■■■■■ 5.49
CHKB-207ENST00000476289 UNC13BO14795 1591 aa49.32■■■■■ 5.49
CHKB-207ENST00000476289 MED14O60244 1454 aa49.31■■■■■ 5.48
CHKB-207ENST00000476289 PIK3C2BO00750 1634 aa49.3■■■■■ 5.48
CHKB-207ENST00000476289 SYNMO15061 1565 aa49.29■■■■■ 5.48
CHKB-207ENST00000476289 NPHP4O75161 1426 aaPredicted RBP49.27■■■■■ 5.48
CHKB-207ENST00000476289 IQSEC2Q5JU85 1478 aa49.27■■■■■ 5.48
CHKB-207ENST00000476289 RRBP1Q9P2E9 1410 aaKnown RBP49.26■■■■■ 5.48
CHKB-207ENST00000476289 NOS1P29475 1434 aa49.25■■■■■ 5.47
CHKB-207ENST00000476289 TET3O43151 1660 aa49.24■■■■■ 5.47
CHKB-207ENST00000476289 IQGAP1P46940 1657 aa49.23■■■■■ 5.47
CHKB-207ENST00000476289 ARHGAP23Q9P227 1491 aa49.2■■■■■ 5.47
CHKB-207ENST00000476289 SLIT1O75093 1534 aa49.19■■■■■ 5.47
CHKB-207ENST00000476289 RPRD2Q5VT52 1461 aaKnown RBP49.18■■■■■ 5.46
CHKB-207ENST00000476289 GCC2Q8IWJ2 1684 aa49.17■■■■■ 5.46
CHKB-207ENST00000476289 SCAF11Q99590 1463 aaKnown RBP49.14■■■■■ 5.46
CHKB-207ENST00000476289 IDI1Q13907 227 aa49.14■■■■■ 5.46
CHKB-207ENST00000476289 KDM5AP29375 1690 aaKnown RBP49.14■■■■■ 5.46
CHKB-207ENST00000476289 IQGAP3Q86VI3 1631 aa49.12■■■■■ 5.45
CHKB-207ENST00000476289 LTKP29376 864 aa49.09■■■■■ 5.45
CHKB-207ENST00000476289 E9PCH4 1651 aa49.06■■■■■ 5.44
CHKB-207ENST00000476289 TMEM2Q9UHN6 1383 aa49.05■■■■■ 5.44
CHKB-207ENST00000476289 ADGRB3O60242 1522 aa49.05■■■■■ 5.44
CHKB-207ENST00000476289 CPS1P31327 1500 aa49.05■■■■■ 5.44
CHKB-207ENST00000476289 STAG3Q9UJ98 1225 aa49.05■■■■■ 5.44
CHKB-207ENST00000476289 TXNDC2Q86VQ3 553 aa49.03■■■■■ 5.44
CHKB-207ENST00000476289 NUP155O75694 1391 aa49.01■■■■■ 5.44
CHKB-207ENST00000476289 SLC52A1Q9NWF4 448 aa49■■■■■ 5.43
CHKB-207ENST00000476289 EID1Q9Y6B2 187 aa48.96■■■■■ 5.43
CHKB-207ENST00000476289 STRCP1A6NGW2 1772 aa48.95■■■■■ 5.43
CHKB-207ENST00000476289 NAIPQ13075 1403 aa48.9■■■■■ 5.42
CHKB-207ENST00000476289 MYO5BQ9ULV0 1848 aa48.89■■■■■ 5.42
CHKB-207ENST00000476289 UBAP1LF5GYI3 381 aa48.88■■■■■ 5.42
CHKB-207ENST00000476289 TMEM131LA2VDJ0 1609 aa48.84■■■■■ 5.41
CHKB-207ENST00000476289 LRRC7Q96NW7 1537 aa48.77■■■■■ 5.4
CHKB-207ENST00000476289 ZFYVE9O95405 1425 aa48.76■■■■■ 5.4
CHKB-207ENST00000476289 HFM1A2PYH4 1435 aa48.75■■■■■ 5.39
CHKB-207ENST00000476289 RIMS2Q9UQ26 1411 aa48.69■■■■■ 5.39
CHKB-207ENST00000476289 SPHKAPQ2M3C7 1700 aa48.69■■■■■ 5.38
CHKB-207ENST00000476289 CHGAP10645 457 aaKnown RBP48.67■■■■■ 5.38
CHKB-207ENST00000476289 SLC26A8Q96RN1 970 aa48.65■■■■■ 5.38
CHKB-207ENST00000476289 ALKQ9UM73 1620 aa48.63■■■■■ 5.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms