RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	CFAP44	Q96MT7	982 aa		7.75	□□□□□ -1.17
HNRNPU-208	ENST00000475997	GOLGA6L4	A6NEF3	574 aa		7.75	□□□□□ -1.17
HNRNPU-208	ENST00000475997	TCERG1	O14776	1098 aa	Known RBP	7.75	□□□□□ -1.17
HNRNPU-208	ENST00000475997	RRP1	P56182	461 aa	Known RBP	7.75	□□□□□ -1.17
HNRNPU-208	ENST00000475997	HECW1	Q76N89	1606 aa		7.75	□□□□□ -1.17
HNRNPU-208	ENST00000475997	SNAPC4	Q5SXM2	1469 aa		7.75	□□□□□ -1.17
HNRNPU-208	ENST00000475997	VSIG10	Q8N0Z9	540 aa		7.75	□□□□□ -1.17
HNRNPU-208	ENST00000475997	CFAP43	Q8NDM7	1665 aa		7.75	□□□□□ -1.17
HNRNPU-208	ENST00000475997	ABCC5	O15440	1437 aa		7.74	□□□□□ -1.17
HNRNPU-208	ENST00000475997	PDE3B	Q13370	1112 aa		7.74	□□□□□ -1.17
HNRNPU-208	ENST00000475997	RSPH4A	Q5TD94	716 aa		7.74	□□□□□ -1.17
HNRNPU-208	ENST00000475997	HSCB	Q8IWL3	235 aa		7.74	□□□□□ -1.17
HNRNPU-208	ENST00000475997	CCDC144A	A2RUR9	1427 aa		7.74	□□□□□ -1.17
HNRNPU-208	ENST00000475997	SET	Q01105	290 aa	Predicted RBP	7.74	□□□□□ -1.17
HNRNPU-208	ENST00000475997	GOLGA6L1	Q8N7Z2	621 aa		7.74	□□□□□ -1.17
HNRNPU-208	ENST00000475997	NCOA1	Q15788	1441 aa		7.74	□□□□□ -1.17
HNRNPU-208	ENST00000475997	KIAA1107	Q9UPP5	1409 aa		7.74	□□□□□ -1.17
HNRNPU-208	ENST00000475997	NBPF1	Q3BBV0	1214 aa		7.73	□□□□□ -1.17
HNRNPU-208	ENST00000475997	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.73	□□□□□ -1.17
HNRNPU-208	ENST00000475997	ROCK1	Q13464	1354 aa		7.73	□□□□□ -1.17
HNRNPU-208	ENST00000475997	IQGAP2	Q13576	1575 aa		7.73	□□□□□ -1.17
HNRNPU-208	ENST00000475997	LAMC3	Q9Y6N6	1575 aa		7.73	□□□□□ -1.17
HNRNPU-208	ENST00000475997	MS4A1	P11836	297 aa		7.73	□□□□□ -1.17
HNRNPU-208	ENST00000475997	GBP4	Q96PP9	640 aa		7.73	□□□□□ -1.17
HNRNPU-208	ENST00000475997	TRO	Q12816	1431 aa	Predicted RBP	7.73	□□□□□ -1.17
HNRNPU-208	ENST00000475997	EFCAB2	Q5VUJ9	269 aa		7.72	□□□□□ -1.17
HNRNPU-208	ENST00000475997	CDCA7L	Q96GN5	454 aa		7.72	□□□□□ -1.17
HNRNPU-208	ENST00000475997	PTPRG	P23470	1445 aa		7.72	□□□□□ -1.17
HNRNPU-208	ENST00000475997	RPRD2	Q5VT52	1461 aa	Known RBP	7.72	□□□□□ -1.17
HNRNPU-208	ENST00000475997	NPM1	P06748	294 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
HNRNPU-208	ENST00000475997	PDE4A	P27815	886 aa		7.72	□□□□□ -1.17
HNRNPU-208	ENST00000475997	FRAT1	Q92837	279 aa	Predicted RBP	7.72	□□□□□ -1.17
HNRNPU-208	ENST00000475997	DRC7	Q8IY82	874 aa		7.72	□□□□□ -1.17
HNRNPU-208	ENST00000475997	UGGT2	Q9NYU1	1516 aa		7.72	□□□□□ -1.17
HNRNPU-208	ENST00000475997	PAK3	O75914	559 aa	Predicted RBP	7.71	□□□□□ -1.18
HNRNPU-208	ENST00000475997	CCDC146	Q8IYE0	955 aa		7.71	□□□□□ -1.18
HNRNPU-208	ENST00000475997	THOC2	Q8NI27	1593 aa	Known RBP	7.7	□□□□□ -1.18
HNRNPU-208	ENST00000475997	KIAA0586	Q9BVV6	1533 aa		7.7	□□□□□ -1.18
HNRNPU-208	ENST00000475997	CRBN	Q96SW2	442 aa		7.7	□□□□□ -1.18
HNRNPU-208	ENST00000475997	CTTNBP2	Q8WZ74	1663 aa		7.7	□□□□□ -1.18
HNRNPU-208	ENST00000475997	GOLGA6L3	A6NEY3	463 aa		7.7	□□□□□ -1.18
HNRNPU-208	ENST00000475997	GOLGA2	Q08379	1002 aa		7.7	□□□□□ -1.18
HNRNPU-208	ENST00000475997	SYAP1	Q96A49	352 aa	Predicted RBP	7.7	□□□□□ -1.18
HNRNPU-208	ENST00000475997	BRD4	O60885	1362 aa	Predicted RBP	7.7	□□□□□ -1.18
HNRNPU-208	ENST00000475997	MRC2	Q9UBG0	1479 aa		7.69	□□□□□ -1.18
HNRNPU-208	ENST00000475997	SMG6	Q86US8	1419 aa	Known RBP	7.69	□□□□□ -1.18
HNRNPU-208	ENST00000475997	FTSJ3	Q8IY81	847 aa	Known RBP	7.69	□□□□□ -1.18
HNRNPU-208	ENST00000475997	PLB1	Q6P1J6	1458 aa		7.69	□□□□□ -1.18
HNRNPU-208	ENST00000475997		A0A0U1RQG5	324 aa	Predicted RBP	7.69	□□□□□ -1.18
HNRNPU-208	ENST00000475997	KIF3B	O15066	747 aa		7.69	□□□□□ -1.18
HNRNPU-208	ENST00000475997	C9orf84	Q5VXU9	1444 aa		7.69	□□□□□ -1.18
HNRNPU-208	ENST00000475997	ZNF608	Q9ULD9	1512 aa	Predicted RBP	7.68	□□□□□ -1.18
HNRNPU-208	ENST00000475997	NOC3L	Q8WTT2	800 aa	Known RBP	7.68	□□□□□ -1.18
HNRNPU-208	ENST00000475997	SPAG9	O60271	1321 aa	Known RBP	7.68	□□□□□ -1.18
HNRNPU-208	ENST00000475997	ADAMTS8	Q9UP79	889 aa		7.67	□□□□□ -1.18
HNRNPU-208	ENST00000475997	IFT140	Q96RY7	1462 aa		7.67	□□□□□ -1.18
HNRNPU-208	ENST00000475997	CFAP53	Q96M91	514 aa		7.67	□□□□□ -1.18
HNRNPU-208	ENST00000475997	MORC1	Q86VD1	984 aa		7.67	□□□□□ -1.18
HNRNPU-208	ENST00000475997	STAG3	Q9UJ98	1225 aa		7.67	□□□□□ -1.18
HNRNPU-208	ENST00000475997	CAMSAP2	Q08AD1	1489 aa		7.67	□□□□□ -1.18
HNRNPU-208	ENST00000475997	SLC4A3	P48751	1232 aa		7.67	□□□□□ -1.18
HNRNPU-208	ENST00000475997	MCC	P23508	829 aa		7.66	□□□□□ -1.18
HNRNPU-208	ENST00000475997	HTATSF1	O43719	755 aa	Known RBP	7.66	□□□□□ -1.18
HNRNPU-208	ENST00000475997	KANK1	Q14678	1352 aa		7.66	□□□□□ -1.18
HNRNPU-208	ENST00000475997	APAF1	O14727	1248 aa		7.66	□□□□□ -1.18
HNRNPU-208	ENST00000475997	FGD1	P98174	961 aa		7.66	□□□□□ -1.18
HNRNPU-208	ENST00000475997	TCOF1	Q13428	1488 aa	Known RBP	7.66	□□□□□ -1.18
HNRNPU-208	ENST00000475997	GGT6	Q6P531	493 aa		7.66	□□□□□ -1.18
HNRNPU-208	ENST00000475997	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.65	□□□□□ -1.18
HNRNPU-208	ENST00000475997	TPRN	Q4KMQ1	711 aa		7.65	□□□□□ -1.18
HNRNPU-208	ENST00000475997	MAGI3	Q5TCQ9	1506 aa		7.65	□□□□□ -1.18
HNRNPU-208	ENST00000475997	ARID3A	Q99856	593 aa		7.65	□□□□□ -1.19
HNRNPU-208	ENST00000475997	GPS2	Q13227	327 aa		7.64	□□□□□ -1.19
HNRNPU-208	ENST00000475997	U2SURP	O15042	1029 aa	Known RBP	7.64	□□□□□ -1.19
HNRNPU-208	ENST00000475997	ARHGEF11	O15085	1522 aa		7.64	□□□□□ -1.19
HNRNPU-208	ENST00000475997	TPM4	P67936	248 aa		7.64	□□□□□ -1.19
HNRNPU-208	ENST00000475997	GPATCH8	Q9UKJ3	1502 aa	Known RBP	7.64	□□□□□ -1.19
HNRNPU-208	ENST00000475997	NUP153	P49790	1475 aa	Known RBP	7.64	□□□□□ -1.19
HNRNPU-208	ENST00000475997	GRIN2A	Q12879	1464 aa		7.63	□□□□□ -1.19
HNRNPU-208	ENST00000475997	AFAP1	Q8N556	730 aa		7.63	□□□□□ -1.19
HNRNPU-208	ENST00000475997	TRAK1	Q9UPV9	953 aa		7.63	□□□□□ -1.19
HNRNPU-208	ENST00000475997	RRP7A	Q9Y3A4	280 aa	Known RBP	7.63	□□□□□ -1.19
HNRNPU-208	ENST00000475997	APP	P05067	770 aa		7.63	□□□□□ -1.19
HNRNPU-208	ENST00000475997	KCNJ4	P48050	445 aa		7.63	□□□□□ -1.19
HNRNPU-208	ENST00000475997	CENPQ	Q7L2Z9	268 aa	Predicted RBP	7.63	□□□□□ -1.19
HNRNPU-208	ENST00000475997	SKAP1	Q86WV1	359 aa		7.63	□□□□□ -1.19
HNRNPU-208	ENST00000475997	CLUAP1	Q96AJ1	413 aa		7.63	□□□□□ -1.19
HNRNPU-208	ENST00000475997	SAMD9	Q5K651	1589 aa		7.62	□□□□□ -1.19
HNRNPU-208	ENST00000475997	SYNJ2	O15056	1496 aa		7.62	□□□□□ -1.19
HNRNPU-208	ENST00000475997	WASHC2C	Q9Y4E1	1318 aa		7.62	□□□□□ -1.19
HNRNPU-208	ENST00000475997	PPP2R1A	P30153	589 aa		7.62	□□□□□ -1.19
HNRNPU-208	ENST00000475997	MAP7D2	Q96T17	732 aa		7.62	□□□□□ -1.19
HNRNPU-208	ENST00000475997	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.62	□□□□□ -1.19
HNRNPU-208	ENST00000475997	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.62	□□□□□ -1.19
HNRNPU-208	ENST00000475997	MTERF4	Q7Z6M4	381 aa	Known RBP	7.62	□□□□□ -1.19
HNRNPU-208	ENST00000475997	CCDC34	Q96HJ3	373 aa		7.62	□□□□□ -1.19
HNRNPU-208	ENST00000475997	NUTM2D	Q5VT03	806 aa	Predicted RBP	7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	ZNF771	Q7L3S4	317 aa	Predicted RBP	7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	BACH2	Q9BYV9	841 aa		7.61	□□□□□ -1.19
HNRNPU-208	ENST00000475997	DHX29	Q7Z478	1369 aa	Known RBP	7.61	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms