RNA–Protein interactions for RNA: ENST00000475035.5

SNRPE-205, Transcript of small nuclear ribonucleoprotein polypeptide E, humanhuman

TSL 1 (best)

Gene SNRPE, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPE-205ENST00000475035 FAM135AQ9P2D6 1515 aa13.54□□□□□ -0.24
SNRPE-205ENST00000475035 ZMYM3Q14202 1370 aa13.53□□□□□ -0.24
SNRPE-205ENST00000475035 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
SNRPE-205ENST00000475035 CROCC2H7BZ55 1655 aa13.52□□□□□ -0.25
SNRPE-205ENST00000475035 MYO3AQ8NEV4 1616 aa13.51□□□□□ -0.25
SNRPE-205ENST00000475035 KDM5DQ9BY66 1539 aa13.51□□□□□ -0.25
SNRPE-205ENST00000475035 ZNF142P52746 1687 aaPredicted RBP13.5□□□□□ -0.25
SNRPE-205ENST00000475035 KIF3BO15066 747 aa13.5□□□□□ -0.25
SNRPE-205ENST00000475035 STRCQ7RTU9 1775 aa13.5□□□□□ -0.25
SNRPE-205ENST00000475035 EIF2AK4Q9P2K8 1649 aaKnown RBP13.5□□□□□ -0.25
SNRPE-205ENST00000475035 SHANK2Q9UPX8 1470 aa13.49□□□□□ -0.25
SNRPE-205ENST00000475035 FGD6Q6ZV73 1430 aa13.49□□□□□ -0.25
SNRPE-205ENST00000475035 ILDR1Q86SU0 546 aaPredicted RBP13.49□□□□□ -0.25
SNRPE-205ENST00000475035 RNF17Q9BXT8 1623 aaKnown RBP13.49□□□□□ -0.25
SNRPE-205ENST00000475035 POTEDQ86YR6 584 aa13.48□□□□□ -0.25
SNRPE-205ENST00000475035 DNMT1P26358 1616 aaKnown RBP13.48□□□□□ -0.25
SNRPE-205ENST00000475035 PTPRKQ15262 1439 aa13.47□□□□□ -0.25
SNRPE-205ENST00000475035 DUOX2Q9NRD8 1548 aa13.47□□□□□ -0.25
SNRPE-205ENST00000475035 ZC3H13Q5T200 1668 aaKnown RBP13.47□□□□□ -0.25
SNRPE-205ENST00000475035 CEP170BQ9Y4F5 1589 aaPredicted RBP13.46□□□□□ -0.25
SNRPE-205ENST00000475035 TCOF1Q13428 1488 aaKnown RBP13.46□□□□□ -0.25
SNRPE-205ENST00000475035 WASHC2CQ9Y4E1 1318 aa13.45□□□□□ -0.26
SNRPE-205ENST00000475035 PZPP20742 1482 aa13.45□□□□□ -0.26
SNRPE-205ENST00000475035 CAMSAP1Q5T5Y3 1602 aa13.45□□□□□ -0.26
SNRPE-205ENST00000475035 DAPK1P53355 1430 aa13.45□□□□□ -0.26
SNRPE-205ENST00000475035 NCOA1Q15788 1441 aa13.45□□□□□ -0.26
SNRPE-205ENST00000475035 ABCC5O15440 1437 aa13.44□□□□□ -0.26
SNRPE-205ENST00000475035 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
SNRPE-205ENST00000475035 ERBINQ96RT1 1412 aa13.42□□□□□ -0.26
SNRPE-205ENST00000475035 FBXO41Q8TF61 875 aa13.42□□□□□ -0.26
SNRPE-205ENST00000475035 ABCC3O15438 1527 aa13.42□□□□□ -0.26
SNRPE-205ENST00000475035 TNRQ92752 1358 aa13.42□□□□□ -0.26
SNRPE-205ENST00000475035 A2ML1A8K2U0 1454 aa13.42□□□□□ -0.26
SNRPE-205ENST00000475035 CEP152O94986 1710 aa13.42□□□□□ -0.26
SNRPE-205ENST00000475035 PTPRTO14522 1441 aa13.41□□□□□ -0.26
SNRPE-205ENST00000475035 MROH1Q8NDA8 1641 aa13.41□□□□□ -0.26
SNRPE-205ENST00000475035 PLA2R1Q13018 1463 aa13.41□□□□□ -0.26
SNRPE-205ENST00000475035 PRDM15P57071 1507 aaPredicted RBP13.39□□□□□ -0.27
SNRPE-205ENST00000475035 KCNA4P22459 653 aa13.39□□□□□ -0.27
SNRPE-205ENST00000475035 ANKRD30AQ9BXX3 1397 aa13.39□□□□□ -0.27
SNRPE-205ENST00000475035 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
SNRPE-205ENST00000475035 DEPDC5O75140 1603 aa13.38□□□□□ -0.27
SNRPE-205ENST00000475035 NLRP1Q9C000 1473 aa13.37□□□□□ -0.27
SNRPE-205ENST00000475035 POLR1AO95602 1720 aaPredicted RBP13.37□□□□□ -0.27
SNRPE-205ENST00000475035 FAM50AQ14320 339 aaKnown RBP13.37□□□□□ -0.27
SNRPE-205ENST00000475035 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
SNRPE-205ENST00000475035 CERKQ8TCT0 537 aa13.37□□□□□ -0.27
SNRPE-205ENST00000475035 CFAP65Q6ZU64 1925 aaKnown RBP13.37□□□□□ -0.27
SNRPE-205ENST00000475035 PKD2Q13563 968 aa13.36□□□□□ -0.27
SNRPE-205ENST00000475035 CHIC2Q9UKJ5 165 aa13.36□□□□□ -0.27
SNRPE-205ENST00000475035 SPATA31D1Q6ZQQ2 1576 aa13.36□□□□□ -0.27
SNRPE-205ENST00000475035 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
SNRPE-205ENST00000475035 KANK1Q14678 1352 aa13.35□□□□□ -0.27
SNRPE-205ENST00000475035 ERVK-7P63135 1459 aa13.35□□□□□ -0.27
SNRPE-205ENST00000475035 UGGT1Q9NYU2 1555 aa13.34□□□□□ -0.27
SNRPE-205ENST00000475035 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
SNRPE-205ENST00000475035 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
SNRPE-205ENST00000475035 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.28
SNRPE-205ENST00000475035 ARHGAP31Q2M1Z3 1444 aa13.31□□□□□ -0.28
SNRPE-205ENST00000475035 THEMISQ8N1K5 641 aaPredicted RBP13.3□□□□□ -0.28
SNRPE-205ENST00000475035 LTBP4Q8N2S1 1624 aa13.3□□□□□ -0.28
SNRPE-205ENST00000475035 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
SNRPE-205ENST00000475035 VWDEQ8N2E2 1590 aa13.29□□□□□ -0.28
SNRPE-205ENST00000475035 NEURL4Q96JN8 1562 aa13.29□□□□□ -0.28
SNRPE-205ENST00000475035 HOXD11P31277 338 aaPredicted RBP13.29□□□□□ -0.28
SNRPE-205ENST00000475035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.29□□□□□ -0.282e-12■□□□□ 8.8
SNRPE-205ENST00000475035 ANKRD50Q9ULJ7 1429 aa13.29□□□□□ -0.28
SNRPE-205ENST00000475035 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
SNRPE-205ENST00000475035 IQSEC2Q5JU85 1478 aa13.28□□□□□ -0.28
SNRPE-205ENST00000475035 EFCAB6Q5THR3 1501 aa13.28□□□□□ -0.28
SNRPE-205ENST00000475035 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
SNRPE-205ENST00000475035 ANKLE2Q86XL3 938 aa13.27□□□□□ -0.29
SNRPE-205ENST00000475035 IQGAP1P46940 1657 aa13.26□□□□□ -0.29
SNRPE-205ENST00000475035 ZNF335Q9H4Z2 1342 aaPredicted RBP13.26□□□□□ -0.29
SNRPE-205ENST00000475035 ROCK1Q13464 1354 aa13.25□□□□□ -0.29
SNRPE-205ENST00000475035 PPARGC1BQ86YN6 1023 aaKnown RBP13.25□□□□□ -0.29
SNRPE-205ENST00000475035 TET3O43151 1660 aa13.24□□□□□ -0.29
SNRPE-205ENST00000475035 UNC13BO14795 1591 aa13.24□□□□□ -0.29
SNRPE-205ENST00000475035 MED14O60244 1454 aa13.24□□□□□ -0.29
SNRPE-205ENST00000475035 NPHP4O75161 1426 aaPredicted RBP13.24□□□□□ -0.29
SNRPE-205ENST00000475035 GCC2Q8IWJ2 1684 aa13.24□□□□□ -0.29
SNRPE-205ENST00000475035 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
SNRPE-205ENST00000475035 KDM5AP29375 1690 aaKnown RBP13.23□□□□□ -0.29
SNRPE-205ENST00000475035 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
SNRPE-205ENST00000475035 SYNMO15061 1565 aa13.22□□□□□ -0.29
SNRPE-205ENST00000475035 ITGAEP38570 1179 aa13.21□□□□□ -0.29
SNRPE-205ENST00000475035 STAG3Q9UJ98 1225 aa13.21□□□□□ -0.29
SNRPE-205ENST00000475035 SLIT1O75093 1534 aa13.21□□□□□ -0.29
SNRPE-205ENST00000475035 CPS1P31327 1500 aa13.21□□□□□ -0.29
SNRPE-205ENST00000475035 SCAF11Q99590 1463 aaKnown RBP13.21□□□□□ -0.3
SNRPE-205ENST00000475035 NOS1P29475 1434 aa13.2□□□□□ -0.3
SNRPE-205ENST00000475035 IQGAP3Q86VI3 1631 aa13.2□□□□□ -0.3
SNRPE-205ENST00000475035 ADGRB3O60242 1522 aa13.19□□□□□ -0.3
SNRPE-205ENST00000475035 ARHGAP23Q9P227 1491 aa13.19□□□□□ -0.3
SNRPE-205ENST00000475035 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
SNRPE-205ENST00000475035 EID1Q9Y6B2 187 aa13.17□□□□□ -0.3
SNRPE-205ENST00000475035 E9PCH4 1651 aa13.16□□□□□ -0.3
SNRPE-205ENST00000475035 SLC52A1Q9NWF4 448 aa13.16□□□□□ -0.3
SNRPE-205ENST00000475035 TMEM2Q9UHN6 1383 aa13.16□□□□□ -0.3
SNRPE-205ENST00000475035 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms