RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 POLA1P09884 1462 aaPredicted RBP8.1□□□□□ -1.11
LRCH3-214ENST00000473177 MAGI1Q96QZ7 1491 aaPredicted RBP8.09□□□□□ -1.11
LRCH3-214ENST00000473177 PLPP6Q8IY26 295 aa8.09□□□□□ -1.11
LRCH3-214ENST00000473177 RAD54L2Q9Y4B4 1467 aa8.08□□□□□ -1.12
LRCH3-214ENST00000473177 SOGA1O94964 1423 aa8.08□□□□□ -1.12
LRCH3-214ENST00000473177 SYNJ2O15056 1496 aa8.07□□□□□ -1.12
LRCH3-214ENST00000473177 EMILIN3Q9NT22 766 aa8.07□□□□□ -1.12
LRCH3-214ENST00000473177 GRIN2BQ13224 1484 aa8.06□□□□□ -1.12
LRCH3-214ENST00000473177 KDM4FA0A1W2PPD8 638 aa8.05□□□□□ -1.12
LRCH3-214ENST00000473177 CCDC88BA6NC98 1476 aa8.05□□□□□ -1.12
LRCH3-214ENST00000473177 WDR97A6NE52 1622 aa8.04□□□□□ -1.12
LRCH3-214ENST00000473177 TESPA1A2RU30 521 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-214ENST00000473177 DPYSL4O14531 572 aa8.02□□□□□ -1.13
LRCH3-214ENST00000473177 SEMA3EO15041 775 aa8.02□□□□□ -1.13
LRCH3-214ENST00000473177 FAM69CQ0P6D2 419 aa8.01□□□□□ -1.13
LRCH3-214ENST00000473177 OXER1Q8TDS5 423 aa8.01□□□□□ -1.13
LRCH3-214ENST00000473177 FGD5Q6ZNL6 1462 aa8□□□□□ -1.13
LRCH3-214ENST00000473177 SPDYE16A6NNV3 312 aaPredicted RBP8□□□□□ -1.13
LRCH3-214ENST00000473177 SLC34A2O95436 690 aa8□□□□□ -1.13
LRCH3-214ENST00000473177 PDIA6Q15084 440 aa8□□□□□ -1.13
LRCH3-214ENST00000473177 ERCC6L2Q5T890 1561 aa7.99□□□□□ -1.13
LRCH3-214ENST00000473177 MARVELD3Q96A59 401 aa7.99□□□□□ -1.13
LRCH3-214ENST00000473177 KDM6BO15054 1643 aa7.99□□□□□ -1.13
LRCH3-214ENST00000473177 TULP1O00294 542 aaPredicted RBP7.98□□□□□ -1.13
LRCH3-214ENST00000473177 EMP3P54852 163 aa7.98□□□□□ -1.13
LRCH3-214ENST00000473177 MAP3K9P80192 1104 aa7.98□□□□□ -1.13
LRCH3-214ENST00000473177 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.98□□□□□ -1.13
LRCH3-214ENST00000473177 PTCD2Q8WV60 388 aaKnown RBP7.98□□□□□ -1.13
LRCH3-214ENST00000473177 TPRNQ4KMQ1 711 aa7.97□□□□□ -1.13
LRCH3-214ENST00000473177 UPF1Q92900 1129 aaKnown RBP eCLIP7.97□□□□□ -1.13
LRCH3-214ENST00000473177 ABCC10Q5T3U5 1492 aa7.96□□□□□ -1.13
LRCH3-214ENST00000473177 SMYD5Q6GMV2 418 aa7.96□□□□□ -1.14
LRCH3-214ENST00000473177 CEP170Q5SW79 1584 aa7.96□□□□□ -1.14
LRCH3-214ENST00000473177 KIF13AQ9H1H9 1805 aa7.96□□□□□ -1.14
LRCH3-214ENST00000473177 LMOD2Q6P5Q4 547 aa7.95□□□□□ -1.14
LRCH3-214ENST00000473177 FBXO41Q8TF61 875 aa7.95□□□□□ -1.14
LRCH3-214ENST00000473177 HECW2Q9P2P5 1572 aa7.95□□□□□ -1.14
LRCH3-214ENST00000473177 GRIN2AQ12879 1464 aa7.94□□□□□ -1.14
LRCH3-214ENST00000473177 TBC1D12O60347 775 aa7.94□□□□□ -1.14
LRCH3-214ENST00000473177 PRKCSHP14314 528 aaPredicted RBP7.94□□□□□ -1.14
LRCH3-214ENST00000473177 ADGRL1O94910 1474 aa7.94□□□□□ -1.14
LRCH3-214ENST00000473177 PBRM1Q86U86 1689 aa7.93□□□□□ -1.14
LRCH3-214ENST00000473177 MLLT3P42568 568 aaPredicted RBP7.93□□□□□ -1.14
LRCH3-214ENST00000473177 PTGER2P43116 358 aa7.92□□□□□ -1.14
LRCH3-214ENST00000473177 DIP2BQ9P265 1576 aa7.92□□□□□ -1.14
LRCH3-214ENST00000473177 EVI5O60447 810 aa7.91□□□□□ -1.14
LRCH3-214ENST00000473177 HOXB3P14651 431 aaPredicted RBP7.91□□□□□ -1.14
LRCH3-214ENST00000473177 SPNS2Q8IVW8 549 aa7.91□□□□□ -1.14
LRCH3-214ENST00000473177 HS3ST6Q96QI5 342 aa7.91□□□□□ -1.14
LRCH3-214ENST00000473177 PCDHGA4Q9Y5G9 962 aa7.91□□□□□ -1.14
LRCH3-214ENST00000473177 NUP160Q12769 1436 aa7.91□□□□□ -1.14
LRCH3-214ENST00000473177 PRG4Q92954 1404 aaPredicted RBP7.91□□□□□ -1.14
LRCH3-214ENST00000473177 MAPKBP1O60336 1514 aa7.9□□□□□ -1.14
LRCH3-214ENST00000473177 CUX1P39880 1505 aa7.9□□□□□ -1.14
LRCH3-214ENST00000473177 FAM205CA6NFA0 338 aa7.9□□□□□ -1.14
LRCH3-214ENST00000473177 ZNF316A6NFI3 1004 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-214ENST00000473177 MMRN1Q13201 1228 aa7.9□□□□□ -1.14
LRCH3-214ENST00000473177 DOK7Q18PE1 504 aa7.9□□□□□ -1.14
LRCH3-214ENST00000473177 ZNF710Q8N1W2 664 aa7.9□□□□□ -1.14
LRCH3-214ENST00000473177 ANO8Q9HCE9 1232 aaPredicted RBP7.9□□□□□ -1.14
LRCH3-214ENST00000473177 LMTK3Q96Q04 1460 aa7.89□□□□□ -1.15
LRCH3-214ENST00000473177 SHROOM2Q13796 1616 aa7.89□□□□□ -1.15
LRCH3-214ENST00000473177 RIMBP2O15034 1052 aa7.88□□□□□ -1.15
LRCH3-214ENST00000473177 ZSWIM6Q9HCJ5 1215 aa7.88□□□□□ -1.15
LRCH3-214ENST00000473177 ABCA5Q8WWZ7 1642 aa7.88□□□□□ -1.15
LRCH3-214ENST00000473177 ADAMTS12P58397 1594 aa7.87□□□□□ -1.15
LRCH3-214ENST00000473177 ABCA10Q8WWZ4 1543 aa7.87□□□□□ -1.15
LRCH3-214ENST00000473177 RBM26Q5T8P6 1007 aaKnown RBP7.86□□□□□ -1.15
LRCH3-214ENST00000473177 FHAD1B1AJZ9 1412 aa7.86□□□□□ -1.15
LRCH3-214ENST00000473177 GRXCR2A6NFK2 248 aa7.85□□□□□ -1.15
LRCH3-214ENST00000473177 HOXB1P14653 301 aaPredicted RBP7.85□□□□□ -1.15
LRCH3-214ENST00000473177 OSBPP22059 807 aa7.85□□□□□ -1.15
LRCH3-214ENST00000473177 ZC3H15Q8WU90 426 aaKnown RBP7.85□□□□□ -1.15
LRCH3-214ENST00000473177 DDX12PQ92771 950 aa7.85□□□□□ -1.15
LRCH3-214ENST00000473177 JPH4Q96JJ6 628 aa7.85□□□□□ -1.15
LRCH3-214ENST00000473177 GPR153Q6NV75 609 aa7.84□□□□□ -1.15
LRCH3-214ENST00000473177 ARSIQ5FYB1 569 aa7.83□□□□□ -1.16
LRCH3-214ENST00000473177 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
LRCH3-214ENST00000473177 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
LRCH3-214ENST00000473177 TSPOAP1O95153 1857 aa7.83□□□□□ -1.16
LRCH3-214ENST00000473177 ADCY10Q96PN6 1610 aa7.82□□□□□ -1.16
LRCH3-214ENST00000473177 POTEB3A0JP26 581 aa7.82□□□□□ -1.16
LRCH3-214ENST00000473177 PHF14O94880 888 aa7.82□□□□□ -1.16
LRCH3-214ENST00000473177 POTEBQ6S5H4 581 aa7.82□□□□□ -1.16
LRCH3-214ENST00000473177 ERBB3P21860 1342 aa7.81□□□□□ -1.16
LRCH3-214ENST00000473177 GPIHBP1Q8IV16 184 aa7.81□□□□□ -1.16
LRCH3-214ENST00000473177 EPAS1Q99814 870 aa7.81□□□□□ -1.16
LRCH3-214ENST00000473177 WRNQ14191 1432 aaPredicted RBP eCLIP7.8□□□□□ -1.16
LRCH3-214ENST00000473177 ZMYND10O75800 440 aa7.8□□□□□ -1.16
LRCH3-214ENST00000473177 NUDT7P0C024 238 aa7.8□□□□□ -1.16
LRCH3-214ENST00000473177 HRCP23327 699 aa7.8□□□□□ -1.16
LRCH3-214ENST00000473177 KHSRPQ92945 711 aaKnown RBP eCLIP7.8□□□□□ -1.163e-9■■□□□ 12.1
LRCH3-214ENST00000473177 PCDHGA10Q9Y5H3 936 aa7.8□□□□□ -1.16
LRCH3-214ENST00000473177 SOCS7O14512 581 aa7.79□□□□□ -1.16
LRCH3-214ENST00000473177 FOSBP53539 338 aa7.79□□□□□ -1.16
LRCH3-214ENST00000473177 PRIM1P49642 420 aaKnown RBP7.78□□□□□ -1.16
LRCH3-214ENST00000473177 FBXW7Q969H0 707 aa7.78□□□□□ -1.16
LRCH3-214ENST00000473177 DISP3Q9P2K9 1392 aa7.78□□□□□ -1.16
LRCH3-214ENST00000473177 TOP2BQ02880 1626 aa7.78□□□□□ -1.16
LRCH3-214ENST00000473177 TTBK1Q5TCY1 1321 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms