RNA–Protein interactions for RNA: ENST00000470280.1

LDHB-205, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-205ENST00000470280 ZMYM3Q14202 1370 aa16.29■□□□□ 0.2
LDHB-205ENST00000470280 CROCC2H7BZ55 1655 aa16.29■□□□□ 0.2
LDHB-205ENST00000470280 CLTCQ00610 1675 aaKnown RBP16.29■□□□□ 0.2
LDHB-205ENST00000470280 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
LDHB-205ENST00000470280 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
LDHB-205ENST00000470280 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.2
LDHB-205ENST00000470280 MROH2AA6NES4 1674 aa16.27■□□□□ 0.19
LDHB-205ENST00000470280 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
LDHB-205ENST00000470280 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
LDHB-205ENST00000470280 KIF15Q9NS87 1388 aa16.25■□□□□ 0.19
LDHB-205ENST00000470280 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
LDHB-205ENST00000470280 PTPRKQ15262 1439 aa16.23■□□□□ 0.19
LDHB-205ENST00000470280 UHRF1BP1Q6BDS2 1440 aa16.23■□□□□ 0.19
LDHB-205ENST00000470280 NPATQ14207 1427 aa16.22■□□□□ 0.19
LDHB-205ENST00000470280 MROH1Q8NDA8 1641 aa16.22■□□□□ 0.19
LDHB-205ENST00000470280 RNF17Q9BXT8 1623 aaKnown RBP16.22■□□□□ 0.19
LDHB-205ENST00000470280 NCOA1Q15788 1441 aa16.21■□□□□ 0.19
LDHB-205ENST00000470280 KDM5DQ9BY66 1539 aa16.21■□□□□ 0.19
LDHB-205ENST00000470280 EIF2AK4Q9P2K8 1649 aaKnown RBP16.21■□□□□ 0.19
LDHB-205ENST00000470280 WASHC2CQ9Y4E1 1318 aa16.2■□□□□ 0.18
LDHB-205ENST00000470280 FBXO31Q5XUX0 539 aaPredicted RBP16.2■□□□□ 0.18
LDHB-205ENST00000470280 ANKRD30AQ9BXX3 1397 aa16.2■□□□□ 0.18
LDHB-205ENST00000470280 SETD1BQ9UPS6 1966 aaKnown RBP16.19■□□□□ 0.18
LDHB-205ENST00000470280 ADGRL2O95490 1459 aa16.19■□□□□ 0.18
LDHB-205ENST00000470280 FAM135AQ9P2D6 1515 aa16.19■□□□□ 0.18
LDHB-205ENST00000470280 ERBINQ96RT1 1412 aa16.19■□□□□ 0.18
LDHB-205ENST00000470280 ABCC3O15438 1527 aa16.18■□□□□ 0.18
LDHB-205ENST00000470280 PZPP20742 1482 aa16.16■□□□□ 0.18
LDHB-205ENST00000470280 MYO3AQ8NEV4 1616 aa16.14■□□□□ 0.17
LDHB-205ENST00000470280 PRDM15P57071 1507 aaPredicted RBP16.14■□□□□ 0.17
LDHB-205ENST00000470280 ITGAEP38570 1179 aa16.13■□□□□ 0.17
LDHB-205ENST00000470280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.175e-9■■■■■ 39.5
LDHB-205ENST00000470280 TNRQ92752 1358 aa16.13■□□□□ 0.17
LDHB-205ENST00000470280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.13■□□□□ 0.17
LDHB-205ENST00000470280 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
LDHB-205ENST00000470280 CEP152O94986 1710 aa16.12■□□□□ 0.17
LDHB-205ENST00000470280 STRCQ7RTU9 1775 aa16.12■□□□□ 0.17
LDHB-205ENST00000470280 ZC3H13Q5T200 1668 aaKnown RBP16.11■□□□□ 0.17
LDHB-205ENST00000470280 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
LDHB-205ENST00000470280 CEP170BQ9Y4F5 1589 aaPredicted RBP16.11■□□□□ 0.17
LDHB-205ENST00000470280 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
LDHB-205ENST00000470280 ZNF142P52746 1687 aaPredicted RBP16.1■□□□□ 0.17
LDHB-205ENST00000470280 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
LDHB-205ENST00000470280 ROCK1Q13464 1354 aa16.09■□□□□ 0.17
LDHB-205ENST00000470280 A2ML1A8K2U0 1454 aa16.09■□□□□ 0.17
LDHB-205ENST00000470280 ERVK-7P63135 1459 aa16.08■□□□□ 0.16
LDHB-205ENST00000470280 VWDEQ8N2E2 1590 aa16.08■□□□□ 0.16
LDHB-205ENST00000470280 SPATA31D1Q6ZQQ2 1576 aa16.07■□□□□ 0.16
LDHB-205ENST00000470280 ARHGAP31Q2M1Z3 1444 aa16.06■□□□□ 0.16
LDHB-205ENST00000470280 LMTK2Q8IWU2 1503 aa16.05■□□□□ 0.16
LDHB-205ENST00000470280 KANK1Q14678 1352 aa16.05■□□□□ 0.16
LDHB-205ENST00000470280 NCKAP5LQ9HCH0 1330 aa16.05■□□□□ 0.16
LDHB-205ENST00000470280 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
LDHB-205ENST00000470280 PLA2R1Q13018 1463 aa16.03■□□□□ 0.16
LDHB-205ENST00000470280 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
LDHB-205ENST00000470280 PTPRTO14522 1441 aa16.02■□□□□ 0.16
LDHB-205ENST00000470280 UNC13BO14795 1591 aa16■□□□□ 0.15
LDHB-205ENST00000470280 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
LDHB-205ENST00000470280 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
LDHB-205ENST00000470280 EFCAB6Q5THR3 1501 aa15.99■□□□□ 0.15
LDHB-205ENST00000470280 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
LDHB-205ENST00000470280 PKD2Q13563 968 aa15.98■□□□□ 0.15
LDHB-205ENST00000470280 ILDR1Q86SU0 546 aaPredicted RBP15.98■□□□□ 0.15
LDHB-205ENST00000470280 SYNMO15061 1565 aa15.96■□□□□ 0.15
LDHB-205ENST00000470280 NOS1P29475 1434 aa15.96■□□□□ 0.15
LDHB-205ENST00000470280 THEMISQ8N1K5 641 aaPredicted RBP15.96■□□□□ 0.15
LDHB-205ENST00000470280 NEURL4Q96JN8 1562 aa15.96■□□□□ 0.14
LDHB-205ENST00000470280 NAIPQ13075 1403 aa15.95■□□□□ 0.14
LDHB-205ENST00000470280 PPP4R3CPQ6ZMV5 832 aa15.95■□□□□ 0.14
LDHB-205ENST00000470280 TET3O43151 1660 aa15.95■□□□□ 0.14
LDHB-205ENST00000470280 IDI1Q13907 227 aa15.94■□□□□ 0.14
LDHB-205ENST00000470280 CERKQ8TCT0 537 aa15.94■□□□□ 0.14
LDHB-205ENST00000470280 NUP155O75694 1391 aa15.94■□□□□ 0.14
LDHB-205ENST00000470280 UBR1Q8IWV7 1749 aa15.94■□□□□ 0.14
LDHB-205ENST00000470280 PIK3C2BO00750 1634 aa15.93■□□□□ 0.14
LDHB-205ENST00000470280 IQGAP3Q86VI3 1631 aa15.93■□□□□ 0.14
LDHB-205ENST00000470280 ANKLE2Q86XL3 938 aa15.92■□□□□ 0.14
LDHB-205ENST00000470280 LTBP4Q8N2S1 1624 aa15.92■□□□□ 0.14
LDHB-205ENST00000470280 ZNF335Q9H4Z2 1342 aaPredicted RBP15.92■□□□□ 0.14
LDHB-205ENST00000470280 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
LDHB-205ENST00000470280 POLR1AO95602 1720 aaPredicted RBP15.91■□□□□ 0.14
LDHB-205ENST00000470280 E9PCH4 1651 aa15.9■□□□□ 0.14
LDHB-205ENST00000470280 GCC2Q8IWJ2 1684 aa15.9■□□□□ 0.14
LDHB-205ENST00000470280 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
LDHB-205ENST00000470280 ARHGAP23Q9P227 1491 aa15.9■□□□□ 0.14
LDHB-205ENST00000470280 LTKP29376 864 aa15.89■□□□□ 0.13
LDHB-205ENST00000470280 FBXO41Q8TF61 875 aa15.89■□□□□ 0.13
LDHB-205ENST00000470280 MED14O60244 1454 aa15.89■□□□□ 0.13
LDHB-205ENST00000470280 NPHP4O75161 1426 aaPredicted RBP15.88■□□□□ 0.13
LDHB-205ENST00000470280 SLIT1O75093 1534 aa15.88■□□□□ 0.13
LDHB-205ENST00000470280 SLC52A1Q9NWF4 448 aa15.87■□□□□ 0.13
LDHB-205ENST00000470280 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
LDHB-205ENST00000470280 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
LDHB-205ENST00000470280 SCAF11Q99590 1463 aaKnown RBP15.85■□□□□ 0.13
LDHB-205ENST00000470280 ADGRB3O60242 1522 aa15.85■□□□□ 0.13
LDHB-205ENST00000470280 TXNDC2Q86VQ3 553 aa15.85■□□□□ 0.13
LDHB-205ENST00000470280 KDM5AP29375 1690 aaKnown RBP15.83■□□□□ 0.13
LDHB-205ENST00000470280 IQGAP1P46940 1657 aa15.83■□□□□ 0.12
LDHB-205ENST00000470280 HOXD11P31277 338 aaPredicted RBP15.81■□□□□ 0.12
LDHB-205ENST00000470280 TRIM52Q96A61 297 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms