RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CNTLNQ9NXG0 1405 aa22.82■■□□□ 1.24
CDC42SE1-203ENST00000470278 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
CDC42SE1-203ENST00000470278 MYO3AQ8NEV4 1616 aa22.81■■□□□ 1.24
CDC42SE1-203ENST00000470278 NCOA1Q15788 1441 aa22.81■■□□□ 1.24
CDC42SE1-203ENST00000470278 PTPRKQ15262 1439 aa22.8■■□□□ 1.24
CDC42SE1-203ENST00000470278 DUOX2Q9NRD8 1548 aa22.79■■□□□ 1.24
CDC42SE1-203ENST00000470278 PTPRTO14522 1441 aa22.79■■□□□ 1.24
CDC42SE1-203ENST00000470278 NPATQ14207 1427 aa22.78■■□□□ 1.24
CDC42SE1-203ENST00000470278 EIF2AK4Q9P2K8 1649 aaKnown RBP22.78■■□□□ 1.24
CDC42SE1-203ENST00000470278 ROCK1Q13464 1354 aa22.77■■□□□ 1.24
CDC42SE1-203ENST00000470278 DHX29Q7Z478 1369 aaKnown RBP22.77■■□□□ 1.24
CDC42SE1-203ENST00000470278 ANKRD30AQ9BXX3 1397 aa22.77■■□□□ 1.24
CDC42SE1-203ENST00000470278 KIF15Q9NS87 1388 aa22.76■■□□□ 1.23
CDC42SE1-203ENST00000470278 CAMSAP1Q5T5Y3 1602 aa22.75■■□□□ 1.23
CDC42SE1-203ENST00000470278 ERBINQ96RT1 1412 aa22.74■■□□□ 1.23
CDC42SE1-203ENST00000470278 ZMYM3Q14202 1370 aa22.72■■□□□ 1.23
CDC42SE1-203ENST00000470278 CEP170BQ9Y4F5 1589 aaPredicted RBP22.71■■□□□ 1.23
CDC42SE1-203ENST00000470278 RNF17Q9BXT8 1623 aaKnown RBP22.71■■□□□ 1.23
CDC42SE1-203ENST00000470278 CHIC2Q9UKJ5 165 aa22.69■■□□□ 1.22
CDC42SE1-203ENST00000470278 GCC2Q8IWJ2 1684 aa22.68■■□□□ 1.22
CDC42SE1-203ENST00000470278 FAM135AQ9P2D6 1515 aa22.67■■□□□ 1.22
CDC42SE1-203ENST00000470278 DEPDC5O75140 1603 aa22.67■■□□□ 1.22
CDC42SE1-203ENST00000470278 RRP7BPQ9NSQ0 103 aa22.66■■□□□ 1.22
CDC42SE1-203ENST00000470278 DMRT2Q9Y5R5 561 aa22.66■■□□□ 1.22
CDC42SE1-203ENST00000470278 ITGAEP38570 1179 aa22.65■■□□□ 1.22
CDC42SE1-203ENST00000470278 PLA2R1Q13018 1463 aa22.64■■□□□ 1.21
CDC42SE1-203ENST00000470278 ANKRD50Q9ULJ7 1429 aa22.64■■□□□ 1.21
CDC42SE1-203ENST00000470278 MROH1Q8NDA8 1641 aa22.64■■□□□ 1.21
CDC42SE1-203ENST00000470278 PRDM15P57071 1507 aaPredicted RBP22.63■■□□□ 1.21
CDC42SE1-203ENST00000470278 ESF1Q9H501 851 aaKnown RBP22.63■■□□□ 1.21
CDC42SE1-203ENST00000470278 HFM1A2PYH4 1435 aa22.62■■□□□ 1.21
CDC42SE1-203ENST00000470278 IQSEC2Q5JU85 1478 aa22.61■■□□□ 1.21
CDC42SE1-203ENST00000470278 ZC3H13Q5T200 1668 aaKnown RBP22.6■■□□□ 1.21
CDC42SE1-203ENST00000470278 NAIPQ13075 1403 aa22.59■■□□□ 1.21
CDC42SE1-203ENST00000470278 KIF3BO15066 747 aa22.59■■□□□ 1.21
CDC42SE1-203ENST00000470278 NEURL4Q96JN8 1562 aa22.59■■□□□ 1.21
CDC42SE1-203ENST00000470278 KDM5DQ9BY66 1539 aa22.58■■□□□ 1.21
CDC42SE1-203ENST00000470278 POLR1AO95602 1720 aaPredicted RBP22.58■■□□□ 1.21
CDC42SE1-203ENST00000470278 PPP6R1Q9UPN7 881 aa22.58■■□□□ 1.21
CDC42SE1-203ENST00000470278 UNC13BO14795 1591 aa22.58■■□□□ 1.2
CDC42SE1-203ENST00000470278 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
CDC42SE1-203ENST00000470278 GGT6Q6P531 493 aa22.56■■□□□ 1.2
CDC42SE1-203ENST00000470278 A2ML1A8K2U0 1454 aa22.55■■□□□ 1.2
CDC42SE1-203ENST00000470278 VWDEQ8N2E2 1590 aa22.55■■□□□ 1.2
CDC42SE1-203ENST00000470278 ZNF335Q9H4Z2 1342 aaPredicted RBP22.53■■□□□ 1.2
CDC42SE1-203ENST00000470278 PZPP20742 1482 aa22.53■■□□□ 1.2
CDC42SE1-203ENST00000470278 ABCC3O15438 1527 aa22.52■■□□□ 1.2
CDC42SE1-203ENST00000470278 LMTK2Q8IWU2 1503 aa22.5■■□□□ 1.19
CDC42SE1-203ENST00000470278 SPATA31D1Q6ZQQ2 1576 aa22.5■■□□□ 1.19
CDC42SE1-203ENST00000470278 CEP152O94986 1710 aa22.48■■□□□ 1.19
CDC42SE1-203ENST00000470278 IQGAP3Q86VI3 1631 aa22.47■■□□□ 1.19
CDC42SE1-203ENST00000470278 ILDR2Q71H61 639 aa22.47■■□□□ 1.19
CDC42SE1-203ENST00000470278 FBXO31Q5XUX0 539 aaPredicted RBP22.46■■□□□ 1.19
CDC42SE1-203ENST00000470278 KANK1Q14678 1352 aa22.46■■□□□ 1.19
CDC42SE1-203ENST00000470278 PKD2Q13563 968 aa22.44■■□□□ 1.18
CDC42SE1-203ENST00000470278 TNRQ92752 1358 aa22.44■■□□□ 1.18
CDC42SE1-203ENST00000470278 WASHC2CQ9Y4E1 1318 aa22.44■■□□□ 1.18
CDC42SE1-203ENST00000470278 TET3O43151 1660 aa22.42■■□□□ 1.18
CDC42SE1-203ENST00000470278 EFCAB6Q5THR3 1501 aa22.42■■□□□ 1.18
CDC42SE1-203ENST00000470278 SETD5Q9C0A6 1442 aa22.42■■□□□ 1.18
CDC42SE1-203ENST00000470278 ARHGAP31Q2M1Z3 1444 aa22.4■■□□□ 1.18
CDC42SE1-203ENST00000470278 STRCP1A6NGW2 1772 aa22.4■■□□□ 1.18
CDC42SE1-203ENST00000470278 DISP3Q9P2K9 1392 aa22.4■■□□□ 1.18
CDC42SE1-203ENST00000470278 ALKQ9UM73 1620 aa22.4■■□□□ 1.18
CDC42SE1-203ENST00000470278 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
CDC42SE1-203ENST00000470278 ACIN1Q9UKV3 1341 aaKnown RBP22.37■■□□□ 1.17
CDC42SE1-203ENST00000470278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.37■■□□□ 1.174e-8■■□□□ 14.5
CDC42SE1-203ENST00000470278 CFAP65Q6ZU64 1925 aaKnown RBP22.37■■□□□ 1.17
CDC42SE1-203ENST00000470278 NUP155O75694 1391 aa22.37■■□□□ 1.17
CDC42SE1-203ENST00000470278 RPRD2Q5VT52 1461 aaKnown RBP22.36■■□□□ 1.17
CDC42SE1-203ENST00000470278 NLRP1Q9C000 1473 aa22.36■■□□□ 1.17
CDC42SE1-203ENST00000470278 UGGT1Q9NYU2 1555 aa22.35■■□□□ 1.17
CDC42SE1-203ENST00000470278 RAB3GAP2Q9H2M9 1393 aa22.35■■□□□ 1.17
CDC42SE1-203ENST00000470278 MED14O60244 1454 aa22.34■■□□□ 1.17
CDC42SE1-203ENST00000470278 IQGAP1P46940 1657 aa22.34■■□□□ 1.17
CDC42SE1-203ENST00000470278 UBR1Q8IWV7 1749 aa22.34■■□□□ 1.17
CDC42SE1-203ENST00000470278 ERVK-7P63135 1459 aa22.34■■□□□ 1.17
CDC42SE1-203ENST00000470278 E9PCH4 1651 aa22.32■■□□□ 1.16
CDC42SE1-203ENST00000470278 CPS1P31327 1500 aa22.31■■□□□ 1.16
CDC42SE1-203ENST00000470278 HRCP23327 699 aa22.3■■□□□ 1.16
CDC42SE1-203ENST00000470278 UBAP1LF5GYI3 381 aa22.28■■□□□ 1.16
CDC42SE1-203ENST00000470278 NPHP4O75161 1426 aaPredicted RBP22.26■■□□□ 1.15
CDC42SE1-203ENST00000470278 NOS1P29475 1434 aa22.25■■□□□ 1.15
CDC42SE1-203ENST00000470278 XIRP1Q702N8 1843 aaKnown RBP22.24■■□□□ 1.15
CDC42SE1-203ENST00000470278 TRIM52Q96A61 297 aa22.23■■□□□ 1.15
CDC42SE1-203ENST00000470278 SYNMO15061 1565 aa22.23■■□□□ 1.15
CDC42SE1-203ENST00000470278 SPHKAPQ2M3C7 1700 aa22.23■■□□□ 1.15
CDC42SE1-203ENST00000470278 SOCS7O14512 581 aa22.21■■□□□ 1.15
CDC42SE1-203ENST00000470278 ARHGAP23Q9P227 1491 aa22.21■■□□□ 1.15
CDC42SE1-203ENST00000470278 MED1Q15648 1581 aaPredicted RBP22.2■■□□□ 1.14
CDC42SE1-203ENST00000470278 PIK3C2BO00750 1634 aa22.2■■□□□ 1.14
CDC42SE1-203ENST00000470278 ANKLE2Q86XL3 938 aa22.19■■□□□ 1.14
CDC42SE1-203ENST00000470278 SLIT1O75093 1534 aa22.19■■□□□ 1.14
CDC42SE1-203ENST00000470278 LRRC7Q96NW7 1537 aa22.19■■□□□ 1.14
CDC42SE1-203ENST00000470278 KDM5AP29375 1690 aaKnown RBP22.18■■□□□ 1.14
CDC42SE1-203ENST00000470278 TRPM2O94759 1503 aa22.18■■□□□ 1.14
CDC42SE1-203ENST00000470278 THEMISQ8N1K5 641 aaPredicted RBP22.18■■□□□ 1.14
CDC42SE1-203ENST00000470278 SLC4A1APQ9BWU0 796 aaKnown RBP22.18■■□□□ 1.14
CDC42SE1-203ENST00000470278 HSPA1LP34931 641 aa22.15■■□□□ 1.14
CDC42SE1-203ENST00000470278 MPHOSPH9Q99550 1183 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms