RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PLXNC1O60486 1568 aa14.51□□□□□ -0.09
SYNGAP1-205ENST00000470232 GPATCH8Q9UKJ3 1502 aaKnown RBP14.5□□□□□ -0.09
SYNGAP1-205ENST00000470232 TNRQ92752 1358 aa14.49□□□□□ -0.09
SYNGAP1-205ENST00000470232 CCNB3Q8WWL7 1395 aa14.48□□□□□ -0.09
SYNGAP1-205ENST00000470232 POLR1AO95602 1720 aaPredicted RBP14.48□□□□□ -0.09
SYNGAP1-205ENST00000470232 ADGBQ8N7X0 1667 aa14.47□□□□□ -0.09
SYNGAP1-205ENST00000470232 INO80Q9ULG1 1556 aaPredicted RBP14.46□□□□□ -0.09
SYNGAP1-205ENST00000470232 WASHC2CQ9Y4E1 1318 aa14.45□□□□□ -0.1
SYNGAP1-205ENST00000470232 FBXO31Q5XUX0 539 aaPredicted RBP14.45□□□□□ -0.1
SYNGAP1-205ENST00000470232 DHX29Q7Z478 1369 aaKnown RBP14.45□□□□□ -0.1
SYNGAP1-205ENST00000470232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.45□□□□□ -0.1
SYNGAP1-205ENST00000470232 NPHP4O75161 1426 aaPredicted RBP14.44□□□□□ -0.1
SYNGAP1-205ENST00000470232 KIF3BO15066 747 aa14.44□□□□□ -0.1
SYNGAP1-205ENST00000470232 FYCO1Q9BQS8 1478 aa14.44□□□□□ -0.1
SYNGAP1-205ENST00000470232 NEURL4Q96JN8 1562 aa14.43□□□□□ -0.1
SYNGAP1-205ENST00000470232 RTEL1-TNFRSF6BF6WH68 1400 aa14.43□□□□□ -0.1
SYNGAP1-205ENST00000470232 FAM135AQ9P2D6 1515 aa14.43□□□□□ -0.1
SYNGAP1-205ENST00000470232 MED14O60244 1454 aa14.42□□□□□ -0.1
SYNGAP1-205ENST00000470232 VWDEQ8N2E2 1590 aa14.42□□□□□ -0.1
SYNGAP1-205ENST00000470232 MIA2Q96PC5 1412 aa14.41□□□□□ -0.1
SYNGAP1-205ENST00000470232 PZPP20742 1482 aa14.41□□□□□ -0.1
SYNGAP1-205ENST00000470232 NLRP1Q9C000 1473 aa14.41□□□□□ -0.1
SYNGAP1-205ENST00000470232 UGGT1Q9NYU2 1555 aa14.4□□□□□ -0.1
SYNGAP1-205ENST00000470232 MTUS2Q5JR59 1369 aa14.4□□□□□ -0.1
SYNGAP1-205ENST00000470232 RSPH4AQ5TD94 716 aa14.4□□□□□ -0.1
SYNGAP1-205ENST00000470232 DEPDC5O75140 1603 aa14.4□□□□□ -0.1
SYNGAP1-205ENST00000470232 KDM5DQ9BY66 1539 aa14.38□□□□□ -0.11
SYNGAP1-205ENST00000470232 RGS17Q9UGC6 210 aaPredicted RBP14.37□□□□□ -0.11
SYNGAP1-205ENST00000470232 ZNF644Q9H582 1327 aaPredicted RBP14.37□□□□□ -0.11
SYNGAP1-205ENST00000470232 LRRC7Q96NW7 1537 aa14.36□□□□□ -0.11
SYNGAP1-205ENST00000470232 ALKQ9UM73 1620 aa14.36□□□□□ -0.11
SYNGAP1-205ENST00000470232 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
SYNGAP1-205ENST00000470232 RNF17Q9BXT8 1623 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-205ENST00000470232 MBD5Q9P267 1494 aa14.35□□□□□ -0.11
SYNGAP1-205ENST00000470232 TSPY4P0CV99 314 aa14.34□□□□□ -0.11
SYNGAP1-205ENST00000470232 TSPY10P0CW01 314 aa14.34□□□□□ -0.11
SYNGAP1-205ENST00000470232 SYNMO15061 1565 aa14.34□□□□□ -0.11
SYNGAP1-205ENST00000470232 CCDC141Q6ZP82 1450 aa14.3□□□□□ -0.12
SYNGAP1-205ENST00000470232 POTEAQ6S8J7 498 aa14.29□□□□□ -0.12
SYNGAP1-205ENST00000470232 EID1Q9Y6B2 187 aa14.29□□□□□ -0.12
SYNGAP1-205ENST00000470232 FAM135BQ49AJ0 1406 aa14.29□□□□□ -0.12
SYNGAP1-205ENST00000470232 STRCP1A6NGW2 1772 aa14.29□□□□□ -0.12
SYNGAP1-205ENST00000470232 TXNDC2Q86VQ3 553 aa14.28□□□□□ -0.12
SYNGAP1-205ENST00000470232 TIAM1Q13009 1591 aa14.27□□□□□ -0.12
SYNGAP1-205ENST00000470232 CEP162Q5TB80 1403 aa14.26□□□□□ -0.13
SYNGAP1-205ENST00000470232 EHBP1L1Q8N3D4 1523 aa14.25□□□□□ -0.13
SYNGAP1-205ENST00000470232 SCAF11Q99590 1463 aaKnown RBP14.25□□□□□ -0.13
SYNGAP1-205ENST00000470232 LTKP29376 864 aa14.23□□□□□ -0.13
SYNGAP1-205ENST00000470232 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
SYNGAP1-205ENST00000470232 ERVK-7P63135 1459 aa14.22□□□□□ -0.13
SYNGAP1-205ENST00000470232 ZC3H13Q5T200 1668 aaKnown RBP14.22□□□□□ -0.13
SYNGAP1-205ENST00000470232 CAMSAP2Q08AD1 1489 aa14.21□□□□□ -0.13
SYNGAP1-205ENST00000470232 PROSER2Q86WR7 435 aaPredicted RBP14.21□□□□□ -0.13
SYNGAP1-205ENST00000470232 ABCC3O15438 1527 aa14.2□□□□□ -0.14
SYNGAP1-205ENST00000470232 CFAP65Q6ZU64 1925 aaKnown RBP14.2□□□□□ -0.14
SYNGAP1-205ENST00000470232 KCNA6P17658 529 aa14.2□□□□□ -0.14
SYNGAP1-205ENST00000470232 UBR1Q8IWV7 1749 aa14.19□□□□□ -0.14
SYNGAP1-205ENST00000470232 SLIT1O75093 1534 aa14.19□□□□□ -0.14
SYNGAP1-205ENST00000470232 TMEM94Q12767 1356 aa14.19□□□□□ -0.14
SYNGAP1-205ENST00000470232 ARHGEF5Q12774 1597 aa14.18□□□□□ -0.14
SYNGAP1-205ENST00000470232 LRRC9Q6ZRR7 1453 aa14.18□□□□□ -0.14
SYNGAP1-205ENST00000470232 ARHGAP23Q9P227 1491 aa14.18□□□□□ -0.14
SYNGAP1-205ENST00000470232 XIRP1Q702N8 1843 aaKnown RBP14.18□□□□□ -0.14
SYNGAP1-205ENST00000470232 POTEDQ86YR6 584 aa14.17□□□□□ -0.14
SYNGAP1-205ENST00000470232 NCOA2Q15596 1464 aa14.17□□□□□ -0.14
SYNGAP1-205ENST00000470232 JCADQ9P266 1359 aa14.16□□□□□ -0.14
SYNGAP1-205ENST00000470232 EIF2AK4Q9P2K8 1649 aaKnown RBP14.15□□□□□ -0.14
SYNGAP1-205ENST00000470232 ROBO1Q9Y6N7 1651 aa14.15□□□□□ -0.14
SYNGAP1-205ENST00000470232 ZNF772Q68DY9 489 aaPredicted RBP14.15□□□□□ -0.14
SYNGAP1-205ENST00000470232 SLAIN2Q9P270 581 aa14.15□□□□□ -0.14
SYNGAP1-205ENST00000470232 MSH6P52701 1360 aa14.14□□□□□ -0.15
SYNGAP1-205ENST00000470232 TMEM2Q9UHN6 1383 aa14.14□□□□□ -0.15
SYNGAP1-205ENST00000470232 MEX3CQ5U5Q3 659 aaKnown RBP14.14□□□□□ -0.15
SYNGAP1-205ENST00000470232 UPF1Q92900 1129 aaKnown RBP eCLIP14.14□□□□□ -0.15
SYNGAP1-205ENST00000470232 BCANQ96GW7 911 aa14.13□□□□□ -0.15
SYNGAP1-205ENST00000470232 ARHGAP31Q2M1Z3 1444 aa14.13□□□□□ -0.15
SYNGAP1-205ENST00000470232 SLC26A8Q96RN1 970 aa14.12□□□□□ -0.15
SYNGAP1-205ENST00000470232 MAST1Q9Y2H9 1570 aa14.12□□□□□ -0.15
SYNGAP1-205ENST00000470232 CEP152O94986 1710 aa14.11□□□□□ -0.15
SYNGAP1-205ENST00000470232 SPATA31A6Q5VVP1 1343 aa14.11□□□□□ -0.15
SYNGAP1-205ENST00000470232 RBM33Q96EV2 1170 aaKnown RBP14.1□□□□□ -0.15
SYNGAP1-205ENST00000470232 SETD1AO15047 1707 aaKnown RBP14.1□□□□□ -0.15
SYNGAP1-205ENST00000470232 PHLPP1O60346 1717 aa14.1□□□□□ -0.15
SYNGAP1-205ENST00000470232 KANK1Q14678 1352 aa14.09□□□□□ -0.15
SYNGAP1-205ENST00000470232 RXRBP28702 533 aa14.09□□□□□ -0.15
SYNGAP1-205ENST00000470232 HDGFP51858 240 aaKnown RBP14.09□□□□□ -0.15
SYNGAP1-205ENST00000470232 TRIM52Q96A61 297 aa14.09□□□□□ -0.15
SYNGAP1-205ENST00000470232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.09□□□□□ -0.15
SYNGAP1-205ENST00000470232 PRDM15P57071 1507 aaPredicted RBP14.09□□□□□ -0.15
SYNGAP1-205ENST00000470232 DUOX2Q9NRD8 1548 aa14.09□□□□□ -0.15
SYNGAP1-205ENST00000470232 IDI1Q13907 227 aa14.08□□□□□ -0.16
SYNGAP1-205ENST00000470232 NKTRP30414 1462 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-205ENST00000470232 PIK3C2BO00750 1634 aa14.07□□□□□ -0.16
SYNGAP1-205ENST00000470232 MROH1Q8NDA8 1641 aa14.07□□□□□ -0.16
SYNGAP1-205ENST00000470232 MAP3K1Q13233 1512 aa14.06□□□□□ -0.16
SYNGAP1-205ENST00000470232 EFCAB6Q5THR3 1501 aa14.06□□□□□ -0.16
SYNGAP1-205ENST00000470232 KDM5AP29375 1690 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-205ENST00000470232 FGD6Q6ZV73 1430 aa14.06□□□□□ -0.16
SYNGAP1-205ENST00000470232 TET3O43151 1660 aa14.05□□□□□ -0.16
SYNGAP1-205ENST00000470232 SLC52A1Q9NWF4 448 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms