RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 KANK4Q5T7N3 995 aaPredicted RBP33.35■■■□□ 2.93
COL9A3-207ENST00000467819 PLA2R1Q13018 1463 aa33.34■■■□□ 2.93
COL9A3-207ENST00000467819 FAM135AQ9P2D6 1515 aa33.33■■■□□ 2.93
COL9A3-207ENST00000467819 DNMT1P26358 1616 aaKnown RBP33.31■■■□□ 2.92
COL9A3-207ENST00000467819 A2ML1A8K2U0 1454 aa33.31■■■□□ 2.92
COL9A3-207ENST00000467819 MAST1Q9Y2H9 1570 aa33.3■■■□□ 2.92
COL9A3-207ENST00000467819 TCOF1Q13428 1488 aaKnown RBP33.29■■■□□ 2.92
COL9A3-207ENST00000467819 MYOM3Q5VTT5 1437 aa33.28■■■□□ 2.92
COL9A3-207ENST00000467819 PZPP20742 1482 aa33.28■■■□□ 2.92
COL9A3-207ENST00000467819 WASHC2CQ9Y4E1 1318 aa33.28■■■□□ 2.92
COL9A3-207ENST00000467819 PKD2Q13563 968 aa33.27■■■□□ 2.92
COL9A3-207ENST00000467819 FBXO31Q5XUX0 539 aaPredicted RBP33.27■■■□□ 2.92
COL9A3-207ENST00000467819 TNRQ92752 1358 aa33.26■■■□□ 2.92
COL9A3-207ENST00000467819 RNF17Q9BXT8 1623 aaKnown RBP33.24■■■□□ 2.91
COL9A3-207ENST00000467819 MIA2Q96PC5 1412 aa33.24■■■□□ 2.91
COL9A3-207ENST00000467819 POLR1AO95602 1720 aaPredicted RBP33.23■■■□□ 2.91
COL9A3-207ENST00000467819 IQSEC2Q5JU85 1478 aa33.23■■■□□ 2.91
COL9A3-207ENST00000467819 ZNF335Q9H4Z2 1342 aaPredicted RBP33.22■■■□□ 2.91
COL9A3-207ENST00000467819 EIF2AK4Q9P2K8 1649 aaKnown RBP33.2■■■□□ 2.91
COL9A3-207ENST00000467819 ZC3H13Q5T200 1668 aaKnown RBP33.18■■■□□ 2.9
COL9A3-207ENST00000467819 CROCC2H7BZ55 1655 aa33.15■■■□□ 2.9
COL9A3-207ENST00000467819 ABCC3O15438 1527 aa33.15■■■□□ 2.9
COL9A3-207ENST00000467819 CEP152O94986 1710 aa33.14■■■□□ 2.89
COL9A3-207ENST00000467819 APLP2Q06481 763 aa33.13■■■□□ 2.89
COL9A3-207ENST00000467819 MROH1Q8NDA8 1641 aa33.13■■■□□ 2.89
COL9A3-207ENST00000467819 PTPN23Q9H3S7 1636 aa33.13■■■□□ 2.89
COL9A3-207ENST00000467819 NEURL4Q96JN8 1562 aa33.12■■■□□ 2.89
COL9A3-207ENST00000467819 CFAP65Q6ZU64 1925 aaKnown RBP33.11■■■□□ 2.89
COL9A3-207ENST00000467819 NLRP1Q9C000 1473 aa33.11■■■□□ 2.89
COL9A3-207ENST00000467819 DUOX2Q9NRD8 1548 aa33.1■■■□□ 2.89
COL9A3-207ENST00000467819 UGGT1Q9NYU2 1555 aa33.09■■■□□ 2.89
COL9A3-207ENST00000467819 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.07■■■□□ 2.88
COL9A3-207ENST00000467819 SPATA31D1Q6ZQQ2 1576 aa33.04■■■□□ 2.88
COL9A3-207ENST00000467819 SHANK2Q9UPX8 1470 aa33.04■■■□□ 2.88
COL9A3-207ENST00000467819 ABCC5O15440 1437 aa33.03■■■□□ 2.88
COL9A3-207ENST00000467819 THEMISQ8N1K5 641 aaPredicted RBP33.03■■■□□ 2.88
COL9A3-207ENST00000467819 KIF15Q9NS87 1388 aa33.02■■■□□ 2.88
COL9A3-207ENST00000467819 ERVK-7P63135 1459 aa33.01■■■□□ 2.88
COL9A3-207ENST00000467819 ANKLE2Q86XL3 938 aa33■■■□□ 2.87
COL9A3-207ENST00000467819 UBAP1LF5GYI3 381 aa32.99■■■□□ 2.87
COL9A3-207ENST00000467819 FGD6Q6ZV73 1430 aa32.99■■■□□ 2.87
COL9A3-207ENST00000467819 DAPK1P53355 1430 aa32.98■■■□□ 2.87
COL9A3-207ENST00000467819 DEPDC5O75140 1603 aa32.98■■■□□ 2.87
COL9A3-207ENST00000467819 RRP7BPQ9NSQ0 103 aa32.97■■■□□ 2.87
COL9A3-207ENST00000467819 PRDM15P57071 1507 aaPredicted RBP32.97■■■□□ 2.87
COL9A3-207ENST00000467819 DISP3Q9P2K9 1392 aa32.96■■■□□ 2.87
COL9A3-207ENST00000467819 ERBINQ96RT1 1412 aa32.95■■■□□ 2.87
COL9A3-207ENST00000467819 IQGAP1P46940 1657 aa32.94■■■□□ 2.86
COL9A3-207ENST00000467819 NPHP4O75161 1426 aaPredicted RBP32.93■■■□□ 2.86
COL9A3-207ENST00000467819 UBR1Q8IWV7 1749 aa32.92■■■□□ 2.86
COL9A3-207ENST00000467819 MED14O60244 1454 aa32.92■■■□□ 2.86
COL9A3-207ENST00000467819 CPS1P31327 1500 aa32.92■■■□□ 2.86
COL9A3-207ENST00000467819 VWDEQ8N2E2 1590 aa32.91■■■□□ 2.86
COL9A3-207ENST00000467819 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.87■■■□□ 2.853e-8■□□□□ 8.8
COL9A3-207ENST00000467819 CHIC2Q9UKJ5 165 aa32.87■■■□□ 2.85
COL9A3-207ENST00000467819 ARHGAP31Q2M1Z3 1444 aa32.84■■■□□ 2.85
COL9A3-207ENST00000467819 ANKRD30AQ9BXX3 1397 aa32.83■■■□□ 2.85
COL9A3-207ENST00000467819 KANK1Q14678 1352 aa32.81■■■□□ 2.84
COL9A3-207ENST00000467819 STRCP1A6NGW2 1772 aa32.8■■■□□ 2.84
COL9A3-207ENST00000467819 SCAF1Q9H7N4 1312 aaKnown RBP32.78■■■□□ 2.84
COL9A3-207ENST00000467819 PIK3C2BO00750 1634 aa32.77■■■□□ 2.84
COL9A3-207ENST00000467819 ILDR2Q71H61 639 aa32.77■■■□□ 2.84
COL9A3-207ENST00000467819 SCAF11Q99590 1463 aaKnown RBP32.74■■■□□ 2.83
COL9A3-207ENST00000467819 PIP4K2BP78356 416 aa32.74■■■□□ 2.83
COL9A3-207ENST00000467819 FAM50AQ14320 339 aaKnown RBP32.73■■■□□ 2.83
COL9A3-207ENST00000467819 SLIT1O75093 1534 aa32.72■■■□□ 2.83
COL9A3-207ENST00000467819 LMTK2Q8IWU2 1503 aa32.72■■■□□ 2.83
COL9A3-207ENST00000467819 TOM1O60784 492 aa32.72■■■□□ 2.83
COL9A3-207ENST00000467819 ADGRL2O95490 1459 aa32.72■■■□□ 2.83
COL9A3-207ENST00000467819 ARHGAP23Q9P227 1491 aa32.72■■■□□ 2.83
COL9A3-207ENST00000467819 SYNMO15061 1565 aa32.7■■■□□ 2.82
COL9A3-207ENST00000467819 LTKP29376 864 aa32.68■■■□□ 2.82
COL9A3-207ENST00000467819 TXNDC2Q86VQ3 553 aa32.67■■■□□ 2.82
COL9A3-207ENST00000467819 EFCAB6Q5THR3 1501 aa32.67■■■□□ 2.82
COL9A3-207ENST00000467819 LRRC7Q96NW7 1537 aa32.65■■■□□ 2.82
COL9A3-207ENST00000467819 ALKQ9UM73 1620 aa32.65■■■□□ 2.82
COL9A3-207ENST00000467819 KDM5AP29375 1690 aaKnown RBP32.65■■■□□ 2.82
COL9A3-207ENST00000467819 STAG3Q9UJ98 1225 aa32.64■■■□□ 2.82
COL9A3-207ENST00000467819 HSPA1LP34931 641 aa32.63■■■□□ 2.81
COL9A3-207ENST00000467819 EID1Q9Y6B2 187 aa32.62■■■□□ 2.81
COL9A3-207ENST00000467819 TMEM2Q9UHN6 1383 aa32.6■■■□□ 2.81
COL9A3-207ENST00000467819 ANKRD50Q9ULJ7 1429 aa32.6■■■□□ 2.81
COL9A3-207ENST00000467819 IDI1Q13907 227 aa32.58■■■□□ 2.81
COL9A3-207ENST00000467819 NOS1P29475 1434 aa32.57■■■□□ 2.8
COL9A3-207ENST00000467819 XIRP1Q702N8 1843 aaKnown RBP32.56■■■□□ 2.8
COL9A3-207ENST00000467819 ADGRB3O60242 1522 aa32.55■■■□□ 2.8
COL9A3-207ENST00000467819 TET3O43151 1660 aa32.53■■■□□ 2.8
COL9A3-207ENST00000467819 SOCS7O14512 581 aa32.52■■■□□ 2.8
COL9A3-207ENST00000467819 MYO5BQ9ULV0 1848 aa32.51■■■□□ 2.79
COL9A3-207ENST00000467819 GCC2Q8IWJ2 1684 aa32.5■■■□□ 2.79
COL9A3-207ENST00000467819 MED1Q15648 1581 aaPredicted RBP32.5■■■□□ 2.79
COL9A3-207ENST00000467819 UNC13BO14795 1591 aa32.49■■■□□ 2.79
COL9A3-207ENST00000467819 RPRD2Q5VT52 1461 aaKnown RBP32.48■■■□□ 2.79
COL9A3-207ENST00000467819 SENP3Q9H4L4 574 aaPredicted RBP32.46■■■□□ 2.79
COL9A3-207ENST00000467819 SLC52A1Q9NWF4 448 aa32.44■■■□□ 2.78
COL9A3-207ENST00000467819 SLC26A8Q96RN1 970 aa32.41■■■□□ 2.78
COL9A3-207ENST00000467819 E9PCH4 1651 aa32.4■■■□□ 2.78
COL9A3-207ENST00000467819 ROCK1Q13464 1354 aa32.38■■■□□ 2.77
COL9A3-207ENST00000467819 PPARGC1BQ86YN6 1023 aaKnown RBP32.37■■■□□ 2.77
COL9A3-207ENST00000467819 TMEM131LA2VDJ0 1609 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms