RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CROCC2H7BZ55 1655 aa24.25■■□□□ 1.47
SNAPC3-205ENST00000467062 USP35Q9P2H5 1018 aa24.25■■□□□ 1.47
SNAPC3-205ENST00000467062 ST20-MTHFSA0A0A6YYL1 179 aa24.24■■□□□ 1.47
SNAPC3-205ENST00000467062 ERCC6L2Q5T890 1561 aa24.19■■□□□ 1.46
SNAPC3-205ENST00000467062 WASHC2CQ9Y4E1 1318 aa24.19■■□□□ 1.46
SNAPC3-205ENST00000467062 SHANK2Q9UPX8 1470 aa24.18■■□□□ 1.46
SNAPC3-205ENST00000467062 DHX29Q7Z478 1369 aaKnown RBP24.18■■□□□ 1.46
SNAPC3-205ENST00000467062 BCORL1Q5H9F3 1711 aa24.17■■□□□ 1.46
SNAPC3-205ENST00000467062 SAMD9LQ8IVG5 1584 aa24.15■■□□□ 1.46
SNAPC3-205ENST00000467062 EIF5BO60841 1220 aaKnown RBP24.15■■□□□ 1.46
SNAPC3-205ENST00000467062 CCDC141Q6ZP82 1450 aa24.14■■□□□ 1.46
SNAPC3-205ENST00000467062 NBPF1Q3BBV0 1214 aa24.14■■□□□ 1.45
SNAPC3-205ENST00000467062 ARHGAP5Q13017 1502 aa24.12■■□□□ 1.45
SNAPC3-205ENST00000467062 SYCP2Q9BX26 1530 aa24.12■■□□□ 1.45
SNAPC3-205ENST00000467062 CHD1O14646 1710 aa24.11■■□□□ 1.45
SNAPC3-205ENST00000467062 CDC42BPBQ9Y5S2 1711 aa24.1■■□□□ 1.45
SNAPC3-205ENST00000467062 PKNOX2Q96KN3 472 aa24.1■■□□□ 1.45
SNAPC3-205ENST00000467062 ROCK2O75116 1388 aaKnown RBP24.1■■□□□ 1.45
SNAPC3-205ENST00000467062 NEFMP07197 916 aa24.09■■□□□ 1.45
SNAPC3-205ENST00000467062 ZBED9Q6R2W3 1325 aa24.09■■□□□ 1.45
SNAPC3-205ENST00000467062 RSPH4AQ5TD94 716 aa24.09■■□□□ 1.45
SNAPC3-205ENST00000467062 TTC37Q6PGP7 1564 aa24.08■■□□□ 1.45
SNAPC3-205ENST00000467062 UHRF1BP1Q6BDS2 1440 aa24.08■■□□□ 1.45
SNAPC3-205ENST00000467062 KDM5CP41229 1560 aa24.07■■□□□ 1.44
SNAPC3-205ENST00000467062 FAM135AQ9P2D6 1515 aa24.07■■□□□ 1.44
SNAPC3-205ENST00000467062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.06■■□□□ 1.44
SNAPC3-205ENST00000467062 PLEKHH2Q8IVE3 1493 aa24.06■■□□□ 1.44
SNAPC3-205ENST00000467062 RALGAPBQ86X10 1494 aa24.06■■□□□ 1.44
SNAPC3-205ENST00000467062 ARHGEF5Q12774 1597 aa24.05■■□□□ 1.44
SNAPC3-205ENST00000467062 CCDC144AA2RUR9 1427 aa24.05■■□□□ 1.44
SNAPC3-205ENST00000467062 TMC1Q8TDI8 760 aa24.04■■□□□ 1.44
SNAPC3-205ENST00000467062 PPM1GO15355 546 aaPredicted RBP24.03■■□□□ 1.44
SNAPC3-205ENST00000467062 PREX2Q70Z35 1606 aa24.02■■□□□ 1.44
SNAPC3-205ENST00000467062 KDM5DQ9BY66 1539 aa24.02■■□□□ 1.44
SNAPC3-205ENST00000467062 PLA2R1Q13018 1463 aa24.01■■□□□ 1.43
SNAPC3-205ENST00000467062 ARHGEF12Q9NZN5 1544 aa24.01■■□□□ 1.43
SNAPC3-205ENST00000467062 RSPH6AQ9H0K4 717 aa24.01■■□□□ 1.43
SNAPC3-205ENST00000467062 AFAP1Q8N556 730 aa24■■□□□ 1.43
SNAPC3-205ENST00000467062 PNISRQ8TF01 805 aaKnown RBP23.99■■□□□ 1.43
SNAPC3-205ENST00000467062 ARID4BQ4LE39 1312 aaPredicted RBP23.98■■□□□ 1.43
SNAPC3-205ENST00000467062 BRPF3Q9ULD4 1205 aa23.97■■□□□ 1.43
SNAPC3-205ENST00000467062 EFCAB2Q5VUJ9 269 aa23.97■■□□□ 1.43
SNAPC3-205ENST00000467062 ABCC2Q92887 1545 aa23.96■■□□□ 1.43
SNAPC3-205ENST00000467062 POLR1AO95602 1720 aaPredicted RBP23.95■■□□□ 1.42
SNAPC3-205ENST00000467062 LAS1LQ9Y4W2 734 aaKnown RBP23.94■■□□□ 1.42
SNAPC3-205ENST00000467062 PRAG1Q86YV5 1406 aa23.94■■□□□ 1.42
SNAPC3-205ENST00000467062 TRAPPC8Q9Y2L5 1435 aa23.93■■□□□ 1.42
SNAPC3-205ENST00000467062 GSE1Q14687 1217 aa23.92■■□□□ 1.42
SNAPC3-205ENST00000467062 SHROOM2Q13796 1616 aa23.91■■□□□ 1.42
SNAPC3-205ENST00000467062 GLIPR1L2Q4G1C9 344 aa23.91■■□□□ 1.42
SNAPC3-205ENST00000467062 CC2D1BQ5T0F9 858 aaKnown RBP23.9■■□□□ 1.42
SNAPC3-205ENST00000467062 A2MP01023 1474 aa23.9■■□□□ 1.42
SNAPC3-205ENST00000467062 PLCH2O75038 1416 aa23.89■■□□□ 1.42
SNAPC3-205ENST00000467062 SPAG9O60271 1321 aaKnown RBP23.86■■□□□ 1.41
SNAPC3-205ENST00000467062 TESK2Q96S53 571 aa23.86■■□□□ 1.41
SNAPC3-205ENST00000467062 NUDCQ9Y266 331 aa23.86■■□□□ 1.41
SNAPC3-205ENST00000467062 DISP3Q9P2K9 1392 aa23.85■■□□□ 1.41
SNAPC3-205ENST00000467062 MYBBP1AQ9BQG0 1328 aaKnown RBP23.85■■□□□ 1.41
SNAPC3-205ENST00000467062 NPM2Q86SE8 214 aaKnown RBP23.84■■□□□ 1.41
SNAPC3-205ENST00000467062 PER1O15534 1290 aaPredicted RBP23.83■■□□□ 1.41
SNAPC3-205ENST00000467062 PANK3Q9H999 370 aa23.83■■□□□ 1.4
SNAPC3-205ENST00000467062 SMG6Q86US8 1419 aaKnown RBP23.83■■□□□ 1.4
SNAPC3-205ENST00000467062 RALBP1Q15311 655 aa23.82■■□□□ 1.4
SNAPC3-205ENST00000467062 MYO5CQ9NQX4 1742 aa23.81■■□□□ 1.4
SNAPC3-205ENST00000467062 RNF123Q5XPI4 1314 aa23.81■■□□□ 1.4
SNAPC3-205ENST00000467062 FAM43AQ8N2R8 423 aa23.81■■□□□ 1.4
SNAPC3-205ENST00000467062 ZCCHC11Q5TAX3 1644 aaKnown RBP23.8■■□□□ 1.4
SNAPC3-205ENST00000467062 MAST1Q9Y2H9 1570 aa23.79■■□□□ 1.4
SNAPC3-205ENST00000467062 DUOX2Q9NRD8 1548 aa23.79■■□□□ 1.4
SNAPC3-205ENST00000467062 UNC13BO14795 1591 aa23.79■■□□□ 1.4
SNAPC3-205ENST00000467062 TCERG1O14776 1098 aaKnown RBP23.78■■□□□ 1.4
SNAPC3-205ENST00000467062 TRPM1Q7Z4N2 1603 aa23.77■■□□□ 1.4
SNAPC3-205ENST00000467062 BRD4O60885 1362 aaPredicted RBP23.76■■□□□ 1.39
SNAPC3-205ENST00000467062 KTN1Q86UP2 1357 aaKnown RBP23.76■■□□□ 1.39
SNAPC3-205ENST00000467062 KIF3BO15066 747 aa23.75■■□□□ 1.39
SNAPC3-205ENST00000467062 NLRP13Q86W25 1043 aa23.75■■□□□ 1.39
SNAPC3-205ENST00000467062 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
SNAPC3-205ENST00000467062 ERBINQ96RT1 1412 aa23.75■■□□□ 1.39
SNAPC3-205ENST00000467062 TMF1P82094 1093 aa23.74■■□□□ 1.39
SNAPC3-205ENST00000467062 PLXNC1O60486 1568 aa23.73■■□□□ 1.39
SNAPC3-205ENST00000467062 LRPPRCP42704 1394 aaKnown RBP23.73■■□□□ 1.39
SNAPC3-205ENST00000467062 DDRGK1Q96HY6 314 aa23.73■■□□□ 1.39
SNAPC3-205ENST00000467062 IQGAP3Q86VI3 1631 aa23.73■■□□□ 1.39
SNAPC3-205ENST00000467062 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
SNAPC3-205ENST00000467062 ABCC1P33527 1531 aa23.71■■□□□ 1.39
SNAPC3-205ENST00000467062 PDE4AP27815 886 aa23.71■■□□□ 1.39
SNAPC3-205ENST00000467062 FRAT1Q92837 279 aaPredicted RBP23.7■■□□□ 1.38
SNAPC3-205ENST00000467062 CDCA7LQ96GN5 454 aa23.7■■□□□ 1.38
SNAPC3-205ENST00000467062 PARD3Q8TEW0 1356 aa23.7■■□□□ 1.38
SNAPC3-205ENST00000467062 SCAPERQ9BY12 1400 aa23.69■■□□□ 1.38
SNAPC3-205ENST00000467062 MS4A1P11836 297 aa23.68■■□□□ 1.38
SNAPC3-205ENST00000467062 UHRF1BP1LA0JNW5 1464 aa23.67■■□□□ 1.38
SNAPC3-205ENST00000467062 BACH2Q9BYV9 841 aa23.67■■□□□ 1.38
SNAPC3-205ENST00000467062 NFKBIBQ15653 356 aa23.67■■□□□ 1.38
SNAPC3-205ENST00000467062 COL17A1Q9UMD9 1497 aaPredicted RBP23.66■■□□□ 1.38
SNAPC3-205ENST00000467062 SLC24A1O60721 1099 aa23.66■■□□□ 1.38
SNAPC3-205ENST00000467062 MAGI2Q86UL8 1455 aa23.66■■□□□ 1.38
SNAPC3-205ENST00000467062 ATP10AO60312 1499 aa23.65■■□□□ 1.38
SNAPC3-205ENST00000467062 PRDM15P57071 1507 aaPredicted RBP23.64■■□□□ 1.37
SNAPC3-205ENST00000467062 FANCAO15360 1455 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms