RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 C9orf84Q5VXU9 1444 aa15.71■□□□□ 0.1
PDZRN3-203ENST00000462146 RCAN3Q9UKA8 241 aa15.69■□□□□ 0.1
PDZRN3-203ENST00000462146 RALBP1Q15311 655 aa15.68■□□□□ 0.1
PDZRN3-203ENST00000462146 CDCA7LQ96GN5 454 aa15.68■□□□□ 0.1
PDZRN3-203ENST00000462146 SKAP1Q86WV1 359 aa15.67■□□□□ 0.1
PDZRN3-203ENST00000462146 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
PDZRN3-203ENST00000462146 KDM5DQ9BY66 1539 aa15.66■□□□□ 0.1
PDZRN3-203ENST00000462146 TRPM1Q7Z4N2 1603 aa15.66■□□□□ 0.1
PDZRN3-203ENST00000462146 PLIN1O60240 522 aa15.65■□□□□ 0.1
PDZRN3-203ENST00000462146 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
PDZRN3-203ENST00000462146 HNRNPMP52272 730 aaKnown RBP eCLIP15.65■□□□□ 0.1
PDZRN3-203ENST00000462146 ABCC10Q5T3U5 1492 aa15.65■□□□□ 0.1
PDZRN3-203ENST00000462146 SHANK2Q9UPX8 1470 aa15.64■□□□□ 0.09
PDZRN3-203ENST00000462146 FBLN2P98095 1184 aa15.64■□□□□ 0.09
PDZRN3-203ENST00000462146 PARD3Q8TEW0 1356 aa15.64■□□□□ 0.09
PDZRN3-203ENST00000462146 PDE4AP27815 886 aa15.64■□□□□ 0.09
PDZRN3-203ENST00000462146 NBPF1Q3BBV0 1214 aa15.64■□□□□ 0.09
PDZRN3-203ENST00000462146 LAS1LQ9Y4W2 734 aaKnown RBP15.64■□□□□ 0.09
PDZRN3-203ENST00000462146 NLRP13Q86W25 1043 aa15.63■□□□□ 0.09
PDZRN3-203ENST00000462146 KTN1Q86UP2 1357 aaKnown RBP15.63■□□□□ 0.09
PDZRN3-203ENST00000462146 CHD1O14646 1710 aa15.62■□□□□ 0.09
PDZRN3-203ENST00000462146 CC2D1BQ5T0F9 858 aaKnown RBP15.62■□□□□ 0.09
PDZRN3-203ENST00000462146 PTPRGP23470 1445 aa15.62■□□□□ 0.09
PDZRN3-203ENST00000462146 RGL3Q3MIN7 710 aa15.62■□□□□ 0.09
PDZRN3-203ENST00000462146 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
PDZRN3-203ENST00000462146 TCERG1O14776 1098 aaKnown RBP15.61■□□□□ 0.09
PDZRN3-203ENST00000462146 ABCA8O94911 1581 aa15.61■□□□□ 0.09
PDZRN3-203ENST00000462146 TSPY4P0CV99 314 aa15.61■□□□□ 0.09
PDZRN3-203ENST00000462146 TSPY10P0CW01 314 aa15.61■□□□□ 0.09
PDZRN3-203ENST00000462146 PRAG1Q86YV5 1406 aa15.61■□□□□ 0.09
PDZRN3-203ENST00000462146 FAM135AQ9P2D6 1515 aa15.61■□□□□ 0.09
PDZRN3-203ENST00000462146 PLEKHD1A6NEE1 506 aa15.61■□□□□ 0.09
PDZRN3-203ENST00000462146 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
PDZRN3-203ENST00000462146 BACH2Q9BYV9 841 aa15.6■□□□□ 0.09
PDZRN3-203ENST00000462146 ATP10BO94823 1461 aa15.6■□□□□ 0.09
PDZRN3-203ENST00000462146 DISP3Q9P2K9 1392 aa15.59■□□□□ 0.09
PDZRN3-203ENST00000462146 MYO5CQ9NQX4 1742 aa15.59■□□□□ 0.09
PDZRN3-203ENST00000462146 JPH4Q96JJ6 628 aa15.58■□□□□ 0.09
PDZRN3-203ENST00000462146 CRBNQ96SW2 442 aa15.57■□□□□ 0.08
PDZRN3-203ENST00000462146 CARMIL2Q6F5E8 1435 aa15.57■□□□□ 0.08
PDZRN3-203ENST00000462146 SAMD9LQ8IVG5 1584 aa15.57■□□□□ 0.08
PDZRN3-203ENST00000462146 CDC42BPBQ9Y5S2 1711 aa15.56■□□□□ 0.08
PDZRN3-203ENST00000462146 PDE3BQ13370 1112 aa15.56■□□□□ 0.08
PDZRN3-203ENST00000462146 COL17A1Q9UMD9 1497 aaPredicted RBP15.56■□□□□ 0.08
PDZRN3-203ENST00000462146 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
PDZRN3-203ENST00000462146 ARHGEF5Q12774 1597 aa15.55■□□□□ 0.08
PDZRN3-203ENST00000462146 A2MP01023 1474 aa15.55■□□□□ 0.08
PDZRN3-203ENST00000462146 NEFMP07197 916 aa15.55■□□□□ 0.08
PDZRN3-203ENST00000462146 BLMP54132 1417 aaPredicted RBP15.55■□□□□ 0.08
PDZRN3-203ENST00000462146 C20orf194Q5TEA3 1177 aa15.54■□□□□ 0.08
PDZRN3-203ENST00000462146 PANK3Q9H999 370 aa15.54■□□□□ 0.08
PDZRN3-203ENST00000462146 PLA2R1Q13018 1463 aa15.54■□□□□ 0.08
PDZRN3-203ENST00000462146 IL27Q8NEV9 243 aa15.54■□□□□ 0.08
PDZRN3-203ENST00000462146 TESK2Q96S53 571 aa15.54■□□□□ 0.08
PDZRN3-203ENST00000462146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.53■□□□□ 0.08
PDZRN3-203ENST00000462146 NUP160Q12769 1436 aa15.53■□□□□ 0.08
PDZRN3-203ENST00000462146 PRDM15P57071 1507 aaPredicted RBP15.53■□□□□ 0.08
PDZRN3-203ENST00000462146 MS4A1P11836 297 aa15.52■□□□□ 0.08
PDZRN3-203ENST00000462146 CCDC141Q6ZP82 1450 aa15.52■□□□□ 0.07
PDZRN3-203ENST00000462146 ZMYM4Q5VZL5 1548 aa15.5■□□□□ 0.07
PDZRN3-203ENST00000462146 GPRASP1Q5JY77 1395 aa15.5■□□□□ 0.07
PDZRN3-203ENST00000462146 PREX2Q70Z35 1606 aa15.5■□□□□ 0.07
PDZRN3-203ENST00000462146 ERBINQ96RT1 1412 aa15.5■□□□□ 0.07
PDZRN3-203ENST00000462146 SYCP2Q9BX26 1530 aa15.49■□□□□ 0.07
PDZRN3-203ENST00000462146 RTN4Q9NQC3 1192 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-203ENST00000462146 LAMC1P11047 1609 aa15.48■□□□□ 0.07
PDZRN3-203ENST00000462146 UNC13BO14795 1591 aa15.48■□□□□ 0.07
PDZRN3-203ENST00000462146 ADAMTS8Q9UP79 889 aa15.48■□□□□ 0.07
PDZRN3-203ENST00000462146 SLC4A3P48751 1232 aa15.47■□□□□ 0.07
PDZRN3-203ENST00000462146 PLEKHH1Q9ULM0 1364 aa15.46■□□□□ 0.06
PDZRN3-203ENST00000462146 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
PDZRN3-203ENST00000462146 KDM2BQ8NHM5 1336 aa15.44■□□□□ 0.06
PDZRN3-203ENST00000462146 TTC37Q6PGP7 1564 aa15.44■□□□□ 0.06
PDZRN3-203ENST00000462146 MAGI2Q86UL8 1455 aa15.44■□□□□ 0.06
PDZRN3-203ENST00000462146 PLEKHH2Q8IVE3 1493 aa15.44■□□□□ 0.06
PDZRN3-203ENST00000462146 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
PDZRN3-203ENST00000462146 TMF1P82094 1093 aa15.44■□□□□ 0.06
PDZRN3-203ENST00000462146 EIF2AK4Q9P2K8 1649 aaKnown RBP15.44■□□□□ 0.06
PDZRN3-203ENST00000462146 IQGAP3Q86VI3 1631 aa15.43■□□□□ 0.06
PDZRN3-203ENST00000462146 RNF17Q9BXT8 1623 aaKnown RBP15.42■□□□□ 0.06
PDZRN3-203ENST00000462146 ANO8Q9HCE9 1232 aaPredicted RBP15.42■□□□□ 0.06
PDZRN3-203ENST00000462146 DUSP27Q5VZP5 1158 aa15.41■□□□□ 0.06
PDZRN3-203ENST00000462146 USP35Q9P2H5 1018 aa15.41■□□□□ 0.06
PDZRN3-203ENST00000462146 ARHGAP5Q13017 1502 aa15.41■□□□□ 0.06
PDZRN3-203ENST00000462146 INSRP06213 1382 aa15.41■□□□□ 0.06
PDZRN3-203ENST00000462146 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
PDZRN3-203ENST00000462146 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
PDZRN3-203ENST00000462146 WDR7Q9Y4E6 1490 aa15.41■□□□□ 0.06
PDZRN3-203ENST00000462146 PPP2R1AP30153 589 aa15.4■□□□□ 0.06
PDZRN3-203ENST00000462146 MAST1Q9Y2H9 1570 aa15.39■□□□□ 0.05
PDZRN3-203ENST00000462146 SHROOM2Q13796 1616 aa15.38■□□□□ 0.05
PDZRN3-203ENST00000462146 DDRGK1Q96HY6 314 aa15.38■□□□□ 0.05
PDZRN3-203ENST00000462146 C8orf34Q49A92 452 aa15.37■□□□□ 0.05
PDZRN3-203ENST00000462146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.37■□□□□ 0.05
PDZRN3-203ENST00000462146 WDR43Q15061 677 aaKnown RBP eCLIP15.37■□□□□ 0.05
PDZRN3-203ENST00000462146 NFKBIBQ15653 356 aa15.37■□□□□ 0.05
PDZRN3-203ENST00000462146 CCDC146Q8IYE0 955 aa15.37■□□□□ 0.05
PDZRN3-203ENST00000462146 IQGAP1P46940 1657 aa15.37■□□□□ 0.05
PDZRN3-203ENST00000462146 CENPQQ7L2Z9 268 aaPredicted RBP15.36■□□□□ 0.05
PDZRN3-203ENST00000462146 PLXNC1O60486 1568 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms