RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.06
NECTIN3-202ENST00000461477 UBAP1LF5GYI3 381 aa15.45■□□□□ 0.06
NECTIN3-202ENST00000461477 ESF1Q9H501 851 aaKnown RBP15.45■□□□□ 0.06
NECTIN3-202ENST00000461477 CEP170BQ9Y4F5 1589 aaPredicted RBP15.45■□□□□ 0.06
NECTIN3-202ENST00000461477 PTPRKQ15262 1439 aa15.44■□□□□ 0.06
NECTIN3-202ENST00000461477 INO80Q9ULG1 1556 aaPredicted RBP15.44■□□□□ 0.06
NECTIN3-202ENST00000461477 CASKIN1Q8WXD9 1431 aa15.43■□□□□ 0.06
NECTIN3-202ENST00000461477 PLA2R1Q13018 1463 aa15.42■□□□□ 0.06
NECTIN3-202ENST00000461477 HNRNPMP52272 730 aaKnown RBP eCLIP15.42■□□□□ 0.06
NECTIN3-202ENST00000461477 ATP7AQ04656 1500 aa15.42■□□□□ 0.06
NECTIN3-202ENST00000461477 GPATCH8Q9UKJ3 1502 aaKnown RBP15.42■□□□□ 0.06
NECTIN3-202ENST00000461477 CCDC18Q5T9S5 1454 aa15.4■□□□□ 0.06
NECTIN3-202ENST00000461477 ZNF777Q9ULD5 760 aaPredicted RBP15.4■□□□□ 0.06
NECTIN3-202ENST00000461477 MED1Q15648 1581 aaPredicted RBP15.4■□□□□ 0.06
NECTIN3-202ENST00000461477 POLA2Q14181 598 aa15.39■□□□□ 0.05
NECTIN3-202ENST00000461477 ATF5Q9Y2D1 282 aaPredicted RBP15.39■□□□□ 0.05
NECTIN3-202ENST00000461477 NEURL4Q96JN8 1562 aa15.39■□□□□ 0.05
NECTIN3-202ENST00000461477 SPAG9O60271 1321 aaKnown RBP15.39■□□□□ 0.05
NECTIN3-202ENST00000461477 A2MP01023 1474 aa15.39■□□□□ 0.05
NECTIN3-202ENST00000461477 DNMT1P26358 1616 aaKnown RBP15.39■□□□□ 0.05
NECTIN3-202ENST00000461477 ALKQ9UM73 1620 aa15.38■□□□□ 0.05
NECTIN3-202ENST00000461477 HSPA1LP34931 641 aa15.37■□□□□ 0.05
NECTIN3-202ENST00000461477 PKD2Q13563 968 aa15.36■□□□□ 0.05
NECTIN3-202ENST00000461477 POLR1AO95602 1720 aaPredicted RBP15.36■□□□□ 0.05
NECTIN3-202ENST00000461477 FYCO1Q9BQS8 1478 aa15.34■□□□□ 0.05
NECTIN3-202ENST00000461477 ATXN8OSP0DMR3 200 aa15.34■□□□□ 0.05
NECTIN3-202ENST00000461477 GGT6Q6P531 493 aa15.34■□□□□ 0.05
NECTIN3-202ENST00000461477 ADGBQ8N7X0 1667 aa15.34■□□□□ 0.05
NECTIN3-202ENST00000461477 A2ML1A8K2U0 1454 aa15.33■□□□□ 0.05
NECTIN3-202ENST00000461477 KIAA1107Q9UPP5 1409 aa15.33■□□□□ 0.04
NECTIN3-202ENST00000461477 ZNF644Q9H582 1327 aaPredicted RBP15.32■□□□□ 0.04
NECTIN3-202ENST00000461477 VWDEQ8N2E2 1590 aa15.32■□□□□ 0.04
NECTIN3-202ENST00000461477 STRCP1A6NGW2 1772 aa15.3■□□□□ 0.04
NECTIN3-202ENST00000461477 PIP4K2BP78356 416 aa15.3■□□□□ 0.04
NECTIN3-202ENST00000461477 FBXO31Q5XUX0 539 aaPredicted RBP15.3■□□□□ 0.04
NECTIN3-202ENST00000461477 TIAM1Q13009 1591 aa15.29■□□□□ 0.04
NECTIN3-202ENST00000461477 MBD5Q9P267 1494 aa15.29■□□□□ 0.04
NECTIN3-202ENST00000461477 SHANK2Q9UPX8 1470 aa15.29■□□□□ 0.04
NECTIN3-202ENST00000461477 CFDP1Q9UEE9 299 aaPredicted RBP15.27■□□□□ 0.04
NECTIN3-202ENST00000461477 CPS1P31327 1500 aa15.27■□□□□ 0.03
NECTIN3-202ENST00000461477 PLEKHH2Q8IVE3 1493 aa15.27■□□□□ 0.03
NECTIN3-202ENST00000461477 CCNB3Q8WWL7 1395 aa15.24■□□□□ 0.03
NECTIN3-202ENST00000461477 TNRQ92752 1358 aa15.24■□□□□ 0.03
NECTIN3-202ENST00000461477 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
NECTIN3-202ENST00000461477 PZPP20742 1482 aa15.23■□□□□ 0.03
NECTIN3-202ENST00000461477 DHX29Q7Z478 1369 aaKnown RBP15.23■□□□□ 0.03
NECTIN3-202ENST00000461477 TOM1O60784 492 aa15.21■□□□□ 0.03
NECTIN3-202ENST00000461477 KDM5DQ9BY66 1539 aa15.21■□□□□ 0.03
NECTIN3-202ENST00000461477 DEPDC5O75140 1603 aa15.2■□□□□ 0.02
NECTIN3-202ENST00000461477 MED14O60244 1454 aa15.2■□□□□ 0.02
NECTIN3-202ENST00000461477 IQGAP1P46940 1657 aa15.19■□□□□ 0.02
NECTIN3-202ENST00000461477 RTEL1-TNFRSF6BF6WH68 1400 aa15.19■□□□□ 0.02
NECTIN3-202ENST00000461477 NPHP4O75161 1426 aaPredicted RBP15.18■□□□□ 0.02
NECTIN3-202ENST00000461477 UGGT1Q9NYU2 1555 aa15.18■□□□□ 0.02
NECTIN3-202ENST00000461477 LRRC7Q96NW7 1537 aa15.17■□□□□ 0.02
NECTIN3-202ENST00000461477 ZC3H13Q5T200 1668 aaKnown RBP15.17■□□□□ 0.02
NECTIN3-202ENST00000461477 MTUS2Q5JR59 1369 aa15.17■□□□□ 0.02
NECTIN3-202ENST00000461477 KIF3BO15066 747 aa15.17■□□□□ 0.02
NECTIN3-202ENST00000461477 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
NECTIN3-202ENST00000461477 XIRP1Q702N8 1843 aaKnown RBP15.17■□□□□ 0.02
NECTIN3-202ENST00000461477 MIA2Q96PC5 1412 aa15.17■□□□□ 0.02
NECTIN3-202ENST00000461477 RGS17Q9UGC6 210 aaPredicted RBP15.16■□□□□ 0.02
NECTIN3-202ENST00000461477 ANKLE2Q86XL3 938 aa15.15■□□□□ 0.02
NECTIN3-202ENST00000461477 EHBP1L1Q8N3D4 1523 aa15.15■□□□□ 0.02
NECTIN3-202ENST00000461477 RNF17Q9BXT8 1623 aaKnown RBP15.14■□□□□ 0.01
NECTIN3-202ENST00000461477 CAMSAP2Q08AD1 1489 aa15.14■□□□□ 0.01
NECTIN3-202ENST00000461477 CCDC141Q6ZP82 1450 aa15.14■□□□□ 0.01
NECTIN3-202ENST00000461477 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
NECTIN3-202ENST00000461477 FAM135AQ9P2D6 1515 aa15.13■□□□□ 0.01
NECTIN3-202ENST00000461477 CEP162Q5TB80 1403 aa15.13■□□□□ 0.01
NECTIN3-202ENST00000461477 WASHC2CQ9Y4E1 1318 aa15.13■□□□□ 0.01
NECTIN3-202ENST00000461477 MROH1Q8NDA8 1641 aa15.12■□□□□ 0.01
NECTIN3-202ENST00000461477 CFAP65Q6ZU64 1925 aaKnown RBP15.11■□□□□ 0.01
NECTIN3-202ENST00000461477 SYNMO15061 1565 aa15.11■□□□□ 0.01
NECTIN3-202ENST00000461477 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
NECTIN3-202ENST00000461477 UBR1Q8IWV7 1749 aa15.11■□□□□ 0.01
NECTIN3-202ENST00000461477 ABCC3O15438 1527 aa15.11■□□□□ 0.01
NECTIN3-202ENST00000461477 THEMISQ8N1K5 641 aaPredicted RBP15.1■□□□□ 0.01
NECTIN3-202ENST00000461477 CEP152O94986 1710 aa15.09■□□□□ 0.01
NECTIN3-202ENST00000461477 ERVK-7P63135 1459 aa15.08■□□□□ 0.01
NECTIN3-202ENST00000461477 NCOA2Q15596 1464 aa15.08■□□□□ 0.01
NECTIN3-202ENST00000461477 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
NECTIN3-202ENST00000461477 LTKP29376 864 aa15.05■□□□□ -0
NECTIN3-202ENST00000461477 MAST1Q9Y2H9 1570 aa15.02■□□□□ -0
NECTIN3-202ENST00000461477 ARHGAP23Q9P227 1491 aa15.02■□□□□ -0
NECTIN3-202ENST00000461477 POTEAQ6S8J7 498 aa15.02■□□□□ -0
NECTIN3-202ENST00000461477 SETD1AO15047 1707 aaKnown RBP15.02□□□□□ -0.01
NECTIN3-202ENST00000461477 EIF2AK4Q9P2K8 1649 aaKnown RBP15.02□□□□□ -0.01
NECTIN3-202ENST00000461477 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
NECTIN3-202ENST00000461477 SLIT1O75093 1534 aa15.01□□□□□ -0.01
NECTIN3-202ENST00000461477 SRCAPQ6ZRS2 3230 aa14.99□□□□□ -0.01
NECTIN3-202ENST00000461477 PIK3C2BO00750 1634 aa14.99□□□□□ -0.01
NECTIN3-202ENST00000461477 ROBO1Q9Y6N7 1651 aa14.97□□□□□ -0.01
NECTIN3-202ENST00000461477 RSPH4AQ5TD94 716 aa14.97□□□□□ -0.01
NECTIN3-202ENST00000461477 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
NECTIN3-202ENST00000461477 FAM135BQ49AJ0 1406 aa14.95□□□□□ -0.02
NECTIN3-202ENST00000461477 TSPY4P0CV99 314 aa14.95□□□□□ -0.02
NECTIN3-202ENST00000461477 TSPY10P0CW01 314 aa14.95□□□□□ -0.02
NECTIN3-202ENST00000461477 TXNDC2Q86VQ3 553 aa14.95□□□□□ -0.02
NECTIN3-202ENST00000461477 RBM33Q96EV2 1170 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms