RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 TIAM1Q13009 1591 aa19.4■□□□□ 0.7
HCFC1-204ENST00000461098 DHX29Q7Z478 1369 aaKnown RBP19.39■□□□□ 0.69
HCFC1-204ENST00000461098 RTEL1-TNFRSF6BF6WH68 1400 aa19.39■□□□□ 0.69
HCFC1-204ENST00000461098 ALKQ9UM73 1620 aa19.39■□□□□ 0.69
HCFC1-204ENST00000461098 PIP4K2BP78356 416 aa19.38■□□□□ 0.69
HCFC1-204ENST00000461098 VWDEQ8N2E2 1590 aa19.36■□□□□ 0.69
HCFC1-204ENST00000461098 TNRQ92752 1358 aa19.36■□□□□ 0.69
HCFC1-204ENST00000461098 TOM1O60784 492 aa19.36■□□□□ 0.69
HCFC1-204ENST00000461098 PZPP20742 1482 aa19.35■□□□□ 0.69
HCFC1-204ENST00000461098 MTUS2Q5JR59 1369 aa19.35■□□□□ 0.69
HCFC1-204ENST00000461098 SCAF1Q9H7N4 1312 aaKnown RBP19.35■□□□□ 0.69
HCFC1-204ENST00000461098 KDM5DQ9BY66 1539 aa19.33■□□□□ 0.68
HCFC1-204ENST00000461098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.32■□□□□ 0.68
HCFC1-204ENST00000461098 KIF3BO15066 747 aa19.32■□□□□ 0.68
HCFC1-204ENST00000461098 MED14O60244 1454 aa19.32■□□□□ 0.68
HCFC1-204ENST00000461098 FAM135AQ9P2D6 1515 aa19.3■□□□□ 0.68
HCFC1-204ENST00000461098 ANKLE2Q86XL3 938 aa19.3■□□□□ 0.68
HCFC1-204ENST00000461098 MIA2Q96PC5 1412 aa19.3■□□□□ 0.68
HCFC1-204ENST00000461098 DEPDC5O75140 1603 aa19.29■□□□□ 0.68
HCFC1-204ENST00000461098 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
HCFC1-204ENST00000461098 EHBP1L1Q8N3D4 1523 aa19.28■□□□□ 0.68
HCFC1-204ENST00000461098 STRCP1A6NGW2 1772 aa19.28■□□□□ 0.68
HCFC1-204ENST00000461098 NLRP1Q9C000 1473 aa19.28■□□□□ 0.68
HCFC1-204ENST00000461098 UGGT1Q9NYU2 1555 aa19.27■□□□□ 0.68
HCFC1-204ENST00000461098 NPHP4O75161 1426 aaPredicted RBP19.27■□□□□ 0.68
HCFC1-204ENST00000461098 THEMISQ8N1K5 641 aaPredicted RBP19.27■□□□□ 0.68
HCFC1-204ENST00000461098 WASHC2CQ9Y4E1 1318 aa19.26■□□□□ 0.67
HCFC1-204ENST00000461098 CCDC141Q6ZP82 1450 aa19.26■□□□□ 0.67
HCFC1-204ENST00000461098 IQGAP1P46940 1657 aa19.24■□□□□ 0.67
HCFC1-204ENST00000461098 CAMSAP2Q08AD1 1489 aa19.23■□□□□ 0.67
HCFC1-204ENST00000461098 LRRC7Q96NW7 1537 aa19.23■□□□□ 0.67
HCFC1-204ENST00000461098 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
HCFC1-204ENST00000461098 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
HCFC1-204ENST00000461098 NCOA2Q15596 1464 aa19.19■□□□□ 0.66
HCFC1-204ENST00000461098 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
HCFC1-204ENST00000461098 RNF17Q9BXT8 1623 aaKnown RBP19.18■□□□□ 0.66
HCFC1-204ENST00000461098 ZC3H13Q5T200 1668 aaKnown RBP19.17■□□□□ 0.66
HCFC1-204ENST00000461098 ABCC3O15438 1527 aa19.17■□□□□ 0.66
HCFC1-204ENST00000461098 SYNMO15061 1565 aa19.16■□□□□ 0.66
HCFC1-204ENST00000461098 RGS17Q9UGC6 210 aaPredicted RBP19.16■□□□□ 0.66
HCFC1-204ENST00000461098 SENP3Q9H4L4 574 aaPredicted RBP19.14■□□□□ 0.65
HCFC1-204ENST00000461098 ERVK-7P63135 1459 aa19.14■□□□□ 0.65
HCFC1-204ENST00000461098 MROH1Q8NDA8 1641 aa19.14■□□□□ 0.65
HCFC1-204ENST00000461098 UBR1Q8IWV7 1749 aa19.12■□□□□ 0.65
HCFC1-204ENST00000461098 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
HCFC1-204ENST00000461098 TSPY4P0CV99 314 aa19.11■□□□□ 0.65
HCFC1-204ENST00000461098 TSPY10P0CW01 314 aa19.11■□□□□ 0.65
HCFC1-204ENST00000461098 MAST1Q9Y2H9 1570 aa19.1■□□□□ 0.65
HCFC1-204ENST00000461098 LTKP29376 864 aa19.09■□□□□ 0.65
HCFC1-204ENST00000461098 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
HCFC1-204ENST00000461098 EIF2AK4Q9P2K8 1649 aaKnown RBP19.08■□□□□ 0.65
HCFC1-204ENST00000461098 SCAF11Q99590 1463 aaKnown RBP19.08■□□□□ 0.64
HCFC1-204ENST00000461098 SLIT1O75093 1534 aa19.07■□□□□ 0.64
HCFC1-204ENST00000461098 CEP152O94986 1710 aa19.07■□□□□ 0.64
HCFC1-204ENST00000461098 CFAP65Q6ZU64 1925 aaKnown RBP19.07■□□□□ 0.64
HCFC1-204ENST00000461098 TXNDC2Q86VQ3 553 aa19.02■□□□□ 0.64
HCFC1-204ENST00000461098 FAM135BQ49AJ0 1406 aa19.01■□□□□ 0.63
HCFC1-204ENST00000461098 LRRC9Q6ZRR7 1453 aa19.01■□□□□ 0.63
HCFC1-204ENST00000461098 ARHGAP31Q2M1Z3 1444 aa19■□□□□ 0.63
HCFC1-204ENST00000461098 POTEAQ6S8J7 498 aa18.99■□□□□ 0.63
HCFC1-204ENST00000461098 PRDM15P57071 1507 aaPredicted RBP18.98■□□□□ 0.63
HCFC1-204ENST00000461098 DUOX2Q9NRD8 1548 aa18.98■□□□□ 0.63
HCFC1-204ENST00000461098 PIK3C2BO00750 1634 aa18.97■□□□□ 0.63
HCFC1-204ENST00000461098 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
HCFC1-204ENST00000461098 KANK4Q5T7N3 995 aaPredicted RBP18.95■□□□□ 0.62
HCFC1-204ENST00000461098 MAP3K1Q13233 1512 aa18.95■□□□□ 0.62
HCFC1-204ENST00000461098 TMEM94Q12767 1356 aa18.94■□□□□ 0.62
HCFC1-204ENST00000461098 TET3O43151 1660 aa18.94■□□□□ 0.62
HCFC1-204ENST00000461098 EID1Q9Y6B2 187 aa18.93■□□□□ 0.62
HCFC1-204ENST00000461098 MYOM3Q5VTT5 1437 aa18.92■□□□□ 0.62
HCFC1-204ENST00000461098 ROBO1Q9Y6N7 1651 aa18.92■□□□□ 0.62
HCFC1-204ENST00000461098 KCNA6P17658 529 aa18.91■□□□□ 0.62
HCFC1-204ENST00000461098 KDM5AP29375 1690 aaKnown RBP18.91■□□□□ 0.62
HCFC1-204ENST00000461098 KIF15Q9NS87 1388 aa18.91■□□□□ 0.62
HCFC1-204ENST00000461098 ERBINQ96RT1 1412 aa18.91■□□□□ 0.62
HCFC1-204ENST00000461098 RBM33Q96EV2 1170 aaKnown RBP18.9■□□□□ 0.62
HCFC1-204ENST00000461098 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
HCFC1-204ENST00000461098 IDI1Q13907 227 aa18.89■□□□□ 0.61
HCFC1-204ENST00000461098 ABCC5O15440 1437 aa18.89■□□□□ 0.61
HCFC1-204ENST00000461098 EFCAB6Q5THR3 1501 aa18.89■□□□□ 0.61
HCFC1-204ENST00000461098 RRP7BPQ9NSQ0 103 aa18.88■□□□□ 0.61
HCFC1-204ENST00000461098 CROCC2H7BZ55 1655 aa18.88■□□□□ 0.61
HCFC1-204ENST00000461098 SLC26A8Q96RN1 970 aa18.87■□□□□ 0.61
HCFC1-204ENST00000461098 LMTK2Q8IWU2 1503 aa18.86■□□□□ 0.61
HCFC1-204ENST00000461098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.86■□□□□ 0.618e-6■□□□□ 10.7
HCFC1-204ENST00000461098 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
HCFC1-204ENST00000461098 PROSER2Q86WR7 435 aaPredicted RBP18.85■□□□□ 0.61
HCFC1-204ENST00000461098 SETD1AO15047 1707 aaKnown RBP18.84■□□□□ 0.61
HCFC1-204ENST00000461098 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.6
HCFC1-204ENST00000461098 NKTRP30414 1462 aaKnown RBP18.83■□□□□ 0.6
HCFC1-204ENST00000461098 NOS1P29475 1434 aa18.83■□□□□ 0.6
HCFC1-204ENST00000461098 PHLPP1O60346 1717 aa18.8■□□□□ 0.6
HCFC1-204ENST00000461098 SLAIN2Q9P270 581 aa18.8■□□□□ 0.6
HCFC1-204ENST00000461098 PTPN23Q9H3S7 1636 aa18.8■□□□□ 0.6
HCFC1-204ENST00000461098 DAPK1P53355 1430 aa18.8■□□□□ 0.6
HCFC1-204ENST00000461098 KANK1Q14678 1352 aa18.8■□□□□ 0.6
HCFC1-204ENST00000461098 ADGRB3O60242 1522 aa18.79■□□□□ 0.6
HCFC1-204ENST00000461098 MSH6P52701 1360 aa18.78■□□□□ 0.6
HCFC1-204ENST00000461098 COL16A1Q07092 1604 aaPredicted RBP18.77■□□□□ 0.6
HCFC1-204ENST00000461098 JCADQ9P266 1359 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms