RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 EIF2AK4Q9P2K8 1649 aaKnown RBP29.57■■■□□ 2.32
COL5A1-203ENST00000460264 SHANK2Q9UPX8 1470 aa29.57■■■□□ 2.32
COL5A1-203ENST00000460264 DNMT1P26358 1616 aaKnown RBP29.56■■■□□ 2.32
COL5A1-203ENST00000460264 ZNF142P52746 1687 aaPredicted RBP29.55■■■□□ 2.32
COL5A1-203ENST00000460264 ABCC5O15440 1437 aa29.54■■■□□ 2.32
COL5A1-203ENST00000460264 ILDR1Q86SU0 546 aaPredicted RBP29.52■■■□□ 2.32
COL5A1-203ENST00000460264 DUOX2Q9NRD8 1548 aa29.5■■■□□ 2.31
COL5A1-203ENST00000460264 DAPK1P53355 1430 aa29.5■■■□□ 2.31
COL5A1-203ENST00000460264 MROH1Q8NDA8 1641 aa29.48■■■□□ 2.31
COL5A1-203ENST00000460264 CEP170BQ9Y4F5 1589 aaPredicted RBP29.47■■■□□ 2.31
COL5A1-203ENST00000460264 ZC3H13Q5T200 1668 aaKnown RBP29.47■■■□□ 2.31
COL5A1-203ENST00000460264 PZPP20742 1482 aa29.47■■■□□ 2.31
COL5A1-203ENST00000460264 CAMSAP1Q5T5Y3 1602 aa29.45■■■□□ 2.3
COL5A1-203ENST00000460264 NCOA1Q15788 1441 aa29.45■■■□□ 2.3
COL5A1-203ENST00000460264 KIF15Q9NS87 1388 aa29.44■■■□□ 2.3
COL5A1-203ENST00000460264 WASHC2CQ9Y4E1 1318 aa29.44■■■□□ 2.3
COL5A1-203ENST00000460264 ABCC3O15438 1527 aa29.43■■■□□ 2.3
COL5A1-203ENST00000460264 DMRT2Q9Y5R5 561 aa29.4■■■□□ 2.3
COL5A1-203ENST00000460264 CEP152O94986 1710 aa29.4■■■□□ 2.3
COL5A1-203ENST00000460264 ERBINQ96RT1 1412 aa29.39■■■□□ 2.3
COL5A1-203ENST00000460264 PTPRTO14522 1441 aa29.37■■■□□ 2.29
COL5A1-203ENST00000460264 A2ML1A8K2U0 1454 aa29.37■■■□□ 2.29
COL5A1-203ENST00000460264 PRDM15P57071 1507 aaPredicted RBP29.37■■■□□ 2.29
COL5A1-203ENST00000460264 FBXO31Q5XUX0 539 aaPredicted RBP29.36■■■□□ 2.29
COL5A1-203ENST00000460264 TNRQ92752 1358 aa29.36■■■□□ 2.29
COL5A1-203ENST00000460264 DEPDC5O75140 1603 aa29.35■■■□□ 2.29
COL5A1-203ENST00000460264 RRP7BPQ9NSQ0 103 aa29.35■■■□□ 2.29
COL5A1-203ENST00000460264 PLA2R1Q13018 1463 aa29.35■■■□□ 2.29
COL5A1-203ENST00000460264 ANKRD30AQ9BXX3 1397 aa29.33■■■□□ 2.29
COL5A1-203ENST00000460264 ADGRL2O95490 1459 aa29.32■■■□□ 2.28
COL5A1-203ENST00000460264 FBXO41Q8TF61 875 aa29.31■■■□□ 2.28
COL5A1-203ENST00000460264 FAM50AQ14320 339 aaKnown RBP29.3■■■□□ 2.28
COL5A1-203ENST00000460264 CHIC2Q9UKJ5 165 aa29.3■■■□□ 2.28
COL5A1-203ENST00000460264 SPATA31D1Q6ZQQ2 1576 aa29.29■■■□□ 2.28
COL5A1-203ENST00000460264 NLRP1Q9C000 1473 aa29.27■■■□□ 2.28
COL5A1-203ENST00000460264 ERVK-7P63135 1459 aa29.25■■■□□ 2.27
COL5A1-203ENST00000460264 CERKQ8TCT0 537 aa29.25■■■□□ 2.27
COL5A1-203ENST00000460264 POLR1AO95602 1720 aaPredicted RBP29.25■■■□□ 2.27
COL5A1-203ENST00000460264 NCKAP5LQ9HCH0 1330 aa29.24■■■□□ 2.27
COL5A1-203ENST00000460264 CFAP65Q6ZU64 1925 aaKnown RBP29.24■■■□□ 2.27
COL5A1-203ENST00000460264 PKD2Q13563 968 aa29.22■■■□□ 2.27
COL5A1-203ENST00000460264 VWDEQ8N2E2 1590 aa29.21■■■□□ 2.27
COL5A1-203ENST00000460264 ARHGAP31Q2M1Z3 1444 aa29.2■■■□□ 2.26
COL5A1-203ENST00000460264 UGGT1Q9NYU2 1555 aa29.19■■■□□ 2.26
COL5A1-203ENST00000460264 LTBP4Q8N2S1 1624 aa29.19■■■□□ 2.26
COL5A1-203ENST00000460264 KANK1Q14678 1352 aa29.17■■■□□ 2.26
COL5A1-203ENST00000460264 NEURL4Q96JN8 1562 aa29.17■■■□□ 2.26
COL5A1-203ENST00000460264 LMTK2Q8IWU2 1503 aa29.16■■■□□ 2.26
COL5A1-203ENST00000460264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.16■■■□□ 2.26
COL5A1-203ENST00000460264 PPARGC1BQ86YN6 1023 aaKnown RBP29.15■■■□□ 2.26
COL5A1-203ENST00000460264 ANKRD50Q9ULJ7 1429 aa29.13■■■□□ 2.25
COL5A1-203ENST00000460264 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.12■■■□□ 2.25
COL5A1-203ENST00000460264 UBR1Q8IWV7 1749 aa29.11■■■□□ 2.25
COL5A1-203ENST00000460264 EFCAB6Q5THR3 1501 aa29.1■■■□□ 2.25
COL5A1-203ENST00000460264 THEMISQ8N1K5 641 aaPredicted RBP29.1■■■□□ 2.25
COL5A1-203ENST00000460264 ROCK1Q13464 1354 aa29.07■■■□□ 2.24
COL5A1-203ENST00000460264 UNC13BO14795 1591 aa29.06■■■□□ 2.24
COL5A1-203ENST00000460264 ZNF335Q9H4Z2 1342 aaPredicted RBP29.05■■■□□ 2.24
COL5A1-203ENST00000460264 IQSEC2Q5JU85 1478 aa29.04■■■□□ 2.24
COL5A1-203ENST00000460264 PIK3C2BO00750 1634 aa29.03■■■□□ 2.24
COL5A1-203ENST00000460264 ANKLE2Q86XL3 938 aa29.03■■■□□ 2.24
COL5A1-203ENST00000460264 MED14O60244 1454 aa29.02■■■□□ 2.24
COL5A1-203ENST00000460264 TET3O43151 1660 aa29.02■■■□□ 2.24
COL5A1-203ENST00000460264 SYNMO15061 1565 aa29.01■■■□□ 2.24
COL5A1-203ENST00000460264 IQGAP1P46940 1657 aa29.01■■■□□ 2.23
COL5A1-203ENST00000460264 GCC2Q8IWJ2 1684 aa28.99■■■□□ 2.23
COL5A1-203ENST00000460264 KDM5AP29375 1690 aaKnown RBP28.99■■■□□ 2.23
COL5A1-203ENST00000460264 NPHP4O75161 1426 aaPredicted RBP28.98■■■□□ 2.23
COL5A1-203ENST00000460264 RRBP1Q9P2E9 1410 aaKnown RBP28.98■■■□□ 2.23
COL5A1-203ENST00000460264 NOS1P29475 1434 aa28.96■■■□□ 2.23
COL5A1-203ENST00000460264 SLIT1O75093 1534 aa28.96■■■□□ 2.23
COL5A1-203ENST00000460264 ITGAEP38570 1179 aa28.96■■■□□ 2.23
COL5A1-203ENST00000460264 RPRD2Q5VT52 1461 aaKnown RBP28.96■■■□□ 2.23
COL5A1-203ENST00000460264 ARHGAP23Q9P227 1491 aa28.96■■■□□ 2.23
COL5A1-203ENST00000460264 IQGAP3Q86VI3 1631 aa28.94■■■□□ 2.22
COL5A1-203ENST00000460264 SCAF11Q99590 1463 aaKnown RBP28.92■■■□□ 2.22
COL5A1-203ENST00000460264 E9PCH4 1651 aa28.89■■■□□ 2.22
COL5A1-203ENST00000460264 ADGRB3O60242 1522 aa28.89■■■□□ 2.21
COL5A1-203ENST00000460264 CPS1P31327 1500 aa28.89■■■□□ 2.21
COL5A1-203ENST00000460264 IDI1Q13907 227 aa28.87■■■□□ 2.21
COL5A1-203ENST00000460264 TMEM2Q9UHN6 1383 aa28.85■■■□□ 2.21
COL5A1-203ENST00000460264 STRCP1A6NGW2 1772 aa28.83■■■□□ 2.21
COL5A1-203ENST00000460264 LTKP29376 864 aa28.83■■■□□ 2.21
COL5A1-203ENST00000460264 STAG3Q9UJ98 1225 aa28.83■■■□□ 2.21
COL5A1-203ENST00000460264 MYO5BQ9ULV0 1848 aa28.82■■■□□ 2.2
COL5A1-203ENST00000460264 TXNDC2Q86VQ3 553 aa28.81■■■□□ 2.2
COL5A1-203ENST00000460264 SLC52A1Q9NWF4 448 aa28.81■■■□□ 2.2
COL5A1-203ENST00000460264 NUP155O75694 1391 aa28.8■■■□□ 2.2
COL5A1-203ENST00000460264 EID1Q9Y6B2 187 aa28.79■■■□□ 2.2
COL5A1-203ENST00000460264 TMEM131LA2VDJ0 1609 aa28.77■■■□□ 2.2
COL5A1-203ENST00000460264 NAIPQ13075 1403 aa28.75■■■□□ 2.19
COL5A1-203ENST00000460264 UBAP1LF5GYI3 381 aa28.72■■■□□ 2.19
COL5A1-203ENST00000460264 SPHKAPQ2M3C7 1700 aa28.7■■■□□ 2.19
COL5A1-203ENST00000460264 LRRC7Q96NW7 1537 aa28.69■■■□□ 2.18
COL5A1-203ENST00000460264 HFM1A2PYH4 1435 aa28.69■■■□□ 2.18
COL5A1-203ENST00000460264 ZFYVE9O95405 1425 aa28.69■■■□□ 2.18
COL5A1-203ENST00000460264 RIMS2Q9UQ26 1411 aa28.63■■■□□ 2.17
COL5A1-203ENST00000460264 XIRP1Q702N8 1843 aaKnown RBP28.62■■■□□ 2.17
COL5A1-203ENST00000460264 ALKQ9UM73 1620 aa28.61■■■□□ 2.17
COL5A1-203ENST00000460264 PLEKHG1Q9ULL1 1385 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms