RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 CHIC2Q9UKJ5 165 aa19.64■□□□□ 0.73
COL18A1-206ENST00000459895 KDM5DQ9BY66 1539 aa19.64■□□□□ 0.73
COL18A1-206ENST00000459895 FAM135AQ9P2D6 1515 aa19.64■□□□□ 0.73
COL18A1-206ENST00000459895 UNC13BO14795 1591 aa19.64■□□□□ 0.73
COL18A1-206ENST00000459895 ROCK1Q13464 1354 aa19.63■□□□□ 0.73
COL18A1-206ENST00000459895 PTPRMP28827 1452 aa19.61■□□□□ 0.73
COL18A1-206ENST00000459895 ITGAEP38570 1179 aa19.61■□□□□ 0.73
COL18A1-206ENST00000459895 MLECQ14165 292 aa19.61■□□□□ 0.73
COL18A1-206ENST00000459895 CAMSAP1Q5T5Y3 1602 aa19.6■□□□□ 0.73
COL18A1-206ENST00000459895 RRP7BPQ9NSQ0 103 aa19.59■□□□□ 0.73
COL18A1-206ENST00000459895 ABCC3O15438 1527 aa19.59■□□□□ 0.73
COL18A1-206ENST00000459895 VWDEQ8N2E2 1590 aa19.57■□□□□ 0.72
COL18A1-206ENST00000459895 ANKRD50Q9ULJ7 1429 aa19.57■□□□□ 0.72
COL18A1-206ENST00000459895 CNTLNQ9NXG0 1405 aa19.55■□□□□ 0.72
COL18A1-206ENST00000459895 HFM1A2PYH4 1435 aa19.54■□□□□ 0.72
COL18A1-206ENST00000459895 NAIPQ13075 1403 aa19.53■□□□□ 0.72
COL18A1-206ENST00000459895 KIF3BO15066 747 aa19.53■□□□□ 0.72
COL18A1-206ENST00000459895 IQGAP3Q86VI3 1631 aa19.53■□□□□ 0.72
COL18A1-206ENST00000459895 PREX1Q8TCU6 1659 aa19.51■□□□□ 0.71
COL18A1-206ENST00000459895 MYO3AQ8NEV4 1616 aa19.51■□□□□ 0.71
COL18A1-206ENST00000459895 EFCAB6Q5THR3 1501 aa19.51■□□□□ 0.71
COL18A1-206ENST00000459895 TET3O43151 1660 aa19.5■□□□□ 0.71
COL18A1-206ENST00000459895 GGT6Q6P531 493 aa19.49■□□□□ 0.71
COL18A1-206ENST00000459895 LMTK2Q8IWU2 1503 aa19.49■□□□□ 0.71
COL18A1-206ENST00000459895 PZPP20742 1482 aa19.47■□□□□ 0.71
COL18A1-206ENST00000459895 ZNF142P52746 1687 aaPredicted RBP19.46■□□□□ 0.71
COL18A1-206ENST00000459895 E9PCH4 1651 aa19.43■□□□□ 0.7
COL18A1-206ENST00000459895 SPATA31D1Q6ZQQ2 1576 aa19.43■□□□□ 0.7
COL18A1-206ENST00000459895 PLPPR3Q6T4P5 718 aa19.4■□□□□ 0.7
COL18A1-206ENST00000459895 ESF1Q9H501 851 aaKnown RBP19.4■□□□□ 0.7
COL18A1-206ENST00000459895 ZMYM3Q14202 1370 aa19.4■□□□□ 0.7
COL18A1-206ENST00000459895 KANK1Q14678 1352 aa19.4■□□□□ 0.7
COL18A1-206ENST00000459895 NPATQ14207 1427 aa19.4■□□□□ 0.7
COL18A1-206ENST00000459895 ERVK-7P63135 1459 aa19.4■□□□□ 0.7
COL18A1-206ENST00000459895 LMTK3Q96Q04 1460 aa19.4■□□□□ 0.7
COL18A1-206ENST00000459895 SYNMO15061 1565 aa19.38■□□□□ 0.69
COL18A1-206ENST00000459895 CEBPAP49715 358 aaPredicted RBP19.38■□□□□ 0.69
COL18A1-206ENST00000459895 PPP6R1Q9UPN7 881 aa19.38■□□□□ 0.69
COL18A1-206ENST00000459895 WASHC2CQ9Y4E1 1318 aa19.38■□□□□ 0.69
COL18A1-206ENST00000459895 CEP170BQ9Y4F5 1589 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-206ENST00000459895 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
COL18A1-206ENST00000459895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.691e-12■□□□□ 11.1
COL18A1-206ENST00000459895 ARHGAP31Q2M1Z3 1444 aa19.36■□□□□ 0.69
COL18A1-206ENST00000459895 SPHKAPQ2M3C7 1700 aa19.36■□□□□ 0.69
COL18A1-206ENST00000459895 CFAP65Q6ZU64 1925 aaKnown RBP19.33■□□□□ 0.69
COL18A1-206ENST00000459895 RPRD2Q5VT52 1461 aaKnown RBP19.33■□□□□ 0.68
COL18A1-206ENST00000459895 SETD5Q9C0A6 1442 aa19.33■□□□□ 0.68
COL18A1-206ENST00000459895 UHRF1BP1Q6BDS2 1440 aa19.32■□□□□ 0.68
COL18A1-206ENST00000459895 NUP155O75694 1391 aa19.32■□□□□ 0.68
COL18A1-206ENST00000459895 PIK3C2BO00750 1634 aa19.31■□□□□ 0.68
COL18A1-206ENST00000459895 RAB3GAP2Q9H2M9 1393 aa19.31■□□□□ 0.68
COL18A1-206ENST00000459895 TNRQ92752 1358 aa19.3■□□□□ 0.68
COL18A1-206ENST00000459895 UBR1Q8IWV7 1749 aa19.29■□□□□ 0.68
COL18A1-206ENST00000459895 UGGT1Q9NYU2 1555 aa19.28■□□□□ 0.68
COL18A1-206ENST00000459895 NOS1P29475 1434 aa19.27■□□□□ 0.68
COL18A1-206ENST00000459895 SETD1BQ9UPS6 1966 aaKnown RBP19.26■□□□□ 0.67
COL18A1-206ENST00000459895 FBXO31Q5XUX0 539 aaPredicted RBP19.26■□□□□ 0.67
COL18A1-206ENST00000459895 A2ML1A8K2U0 1454 aa19.26■□□□□ 0.67
COL18A1-206ENST00000459895 NLRP1Q9C000 1473 aa19.26■□□□□ 0.67
COL18A1-206ENST00000459895 ADGRB3O60242 1522 aa19.25■□□□□ 0.67
COL18A1-206ENST00000459895 TRPM2O94759 1503 aa19.25■□□□□ 0.67
COL18A1-206ENST00000459895 KDM5AP29375 1690 aaKnown RBP19.25■□□□□ 0.67
COL18A1-206ENST00000459895 POLR1AO95602 1720 aaPredicted RBP19.25■□□□□ 0.67
COL18A1-206ENST00000459895 MYO5BQ9ULV0 1848 aa19.24■□□□□ 0.67
COL18A1-206ENST00000459895 CLTCL1P53675 1640 aa19.24■□□□□ 0.67
COL18A1-206ENST00000459895 STRCQ7RTU9 1775 aa19.21■□□□□ 0.67
COL18A1-206ENST00000459895 TRIM52Q96A61 297 aa19.18■□□□□ 0.66
COL18A1-206ENST00000459895 TMEM131LA2VDJ0 1609 aa19.18■□□□□ 0.66
COL18A1-206ENST00000459895 PTPRTO14522 1441 aa19.17■□□□□ 0.66
COL18A1-206ENST00000459895 NEURL4Q96JN8 1562 aa19.16■□□□□ 0.66
COL18A1-206ENST00000459895 TRIM26Q12899 539 aaPredicted RBP19.16■□□□□ 0.66
COL18A1-206ENST00000459895 PLA2R1Q13018 1463 aa19.16■□□□□ 0.66
COL18A1-206ENST00000459895 HSPA2P54652 639 aa19.15■□□□□ 0.66
COL18A1-206ENST00000459895 KIF1BO60333 1816 aa19.14■□□□□ 0.65
COL18A1-206ENST00000459895 SLIT1O75093 1534 aa19.11■□□□□ 0.65
COL18A1-206ENST00000459895 SLC4A1APQ9BWU0 796 aaKnown RBP19.11■□□□□ 0.65
COL18A1-206ENST00000459895 PKD2Q13563 968 aa19.1■□□□□ 0.65
COL18A1-206ENST00000459895 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
COL18A1-206ENST00000459895 IQGAP1P46940 1657 aa19.08■□□□□ 0.65
COL18A1-206ENST00000459895 FOXD1Q16676 465 aa19.07■□□□□ 0.64
COL18A1-206ENST00000459895 IFT172Q9UG01 1749 aa19.06■□□□□ 0.64
COL18A1-206ENST00000459895 MPHOSPH9Q99550 1183 aa19.06■□□□□ 0.64
COL18A1-206ENST00000459895 ACIN1Q9UKV3 1341 aaKnown RBP19.05■□□□□ 0.64
COL18A1-206ENST00000459895 SCAF11Q99590 1463 aaKnown RBP19.03■□□□□ 0.64
COL18A1-206ENST00000459895 ZFYVE9O95405 1425 aa19.03■□□□□ 0.64
COL18A1-206ENST00000459895 HRCP23327 699 aa19.03■□□□□ 0.64
COL18A1-206ENST00000459895 IDI1Q13907 227 aa19.03■□□□□ 0.64
COL18A1-206ENST00000459895 NEXMIFQ5QGS0 1516 aa19.03■□□□□ 0.64
COL18A1-206ENST00000459895 PPLO60437 1756 aa19.03■□□□□ 0.64
COL18A1-206ENST00000459895 CCDC144AA2RUR9 1427 aa19.01■□□□□ 0.63
COL18A1-206ENST00000459895 SLC52A1Q9NWF4 448 aa19.01■□□□□ 0.63
COL18A1-206ENST00000459895 TMEM2Q9UHN6 1383 aa19■□□□□ 0.63
COL18A1-206ENST00000459895 MED14O60244 1454 aa18.99■□□□□ 0.63
COL18A1-206ENST00000459895 NRXN3Q9Y4C0 1643 aa18.97■□□□□ 0.63
COL18A1-206ENST00000459895 RIMS2Q9UQ26 1411 aa18.97■□□□□ 0.63
COL18A1-206ENST00000459895 DHX57Q6P158 1386 aaKnown RBP18.96■□□□□ 0.63
COL18A1-206ENST00000459895 NPHP4O75161 1426 aaPredicted RBP18.96■□□□□ 0.63
COL18A1-206ENST00000459895 SPATA31E1Q6ZUB1 1445 aa18.96■□□□□ 0.63
COL18A1-206ENST00000459895 ANKRD30BQ9BXX2 1392 aa18.95■□□□□ 0.62
COL18A1-206ENST00000459895 THEMISQ8N1K5 641 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms