RNA–Protein interactions for RNA: ENST00000455814.2

LYRM4-202, Transcript of LYR motif containing 4, humanhuman

TSL 3

Gene LYRM4, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-202ENST00000455814 RRP7BPQ9NSQ0 103 aa13.43□□□□□ -0.26
LYRM4-202ENST00000455814 KANK1Q14678 1352 aa13.43□□□□□ -0.26
LYRM4-202ENST00000455814 TNRQ92752 1358 aa13.42□□□□□ -0.26
LYRM4-202ENST00000455814 MAST1Q9Y2H9 1570 aa13.41□□□□□ -0.26
LYRM4-202ENST00000455814 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
LYRM4-202ENST00000455814 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.26
LYRM4-202ENST00000455814 DUOX2Q9NRD8 1548 aa13.4□□□□□ -0.26
LYRM4-202ENST00000455814 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
LYRM4-202ENST00000455814 CLTCQ00610 1675 aaKnown RBP13.4□□□□□ -0.26
LYRM4-202ENST00000455814 ABCC5O15440 1437 aa13.39□□□□□ -0.27
LYRM4-202ENST00000455814 ANKLE2Q86XL3 938 aa13.39□□□□□ -0.27
LYRM4-202ENST00000455814 CHIC2Q9UKJ5 165 aa13.39□□□□□ -0.27
LYRM4-202ENST00000455814 SHANK2Q9UPX8 1470 aa13.39□□□□□ -0.27
LYRM4-202ENST00000455814 PZPP20742 1482 aa13.38□□□□□ -0.27
LYRM4-202ENST00000455814 FBXO31Q5XUX0 539 aaPredicted RBP13.38□□□□□ -0.27
LYRM4-202ENST00000455814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.38□□□□□ -0.27
LYRM4-202ENST00000455814 PTPN23Q9H3S7 1636 aa13.38□□□□□ -0.27
LYRM4-202ENST00000455814 DAPK1P53355 1430 aa13.38□□□□□ -0.27
LYRM4-202ENST00000455814 NCOA1Q15788 1441 aa13.38□□□□□ -0.27
LYRM4-202ENST00000455814 ERBINQ96RT1 1412 aa13.38□□□□□ -0.27
LYRM4-202ENST00000455814 TCOF1Q13428 1488 aaKnown RBP13.37□□□□□ -0.27
LYRM4-202ENST00000455814 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
LYRM4-202ENST00000455814 A2ML1A8K2U0 1454 aa13.36□□□□□ -0.27
LYRM4-202ENST00000455814 PLA2R1Q13018 1463 aa13.36□□□□□ -0.27
LYRM4-202ENST00000455814 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
LYRM4-202ENST00000455814 CAMSAP1Q5T5Y3 1602 aa13.35□□□□□ -0.27
LYRM4-202ENST00000455814 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
LYRM4-202ENST00000455814 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
LYRM4-202ENST00000455814 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.28
LYRM4-202ENST00000455814 EID1Q9Y6B2 187 aa13.31□□□□□ -0.28
LYRM4-202ENST00000455814 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
LYRM4-202ENST00000455814 ABCC3O15438 1527 aa13.3□□□□□ -0.28
LYRM4-202ENST00000455814 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
LYRM4-202ENST00000455814 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
LYRM4-202ENST00000455814 ZC3H13Q5T200 1668 aaKnown RBP13.3□□□□□ -0.28
LYRM4-202ENST00000455814 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
LYRM4-202ENST00000455814 MYO3AQ8NEV4 1616 aa13.29□□□□□ -0.28
LYRM4-202ENST00000455814 STRCQ7RTU9 1775 aa13.29□□□□□ -0.28
LYRM4-202ENST00000455814 SLC52A1Q9NWF4 448 aa13.28□□□□□ -0.28
LYRM4-202ENST00000455814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.28□□□□□ -0.28
LYRM4-202ENST00000455814 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
LYRM4-202ENST00000455814 UGGT1Q9NYU2 1555 aa13.28□□□□□ -0.28
LYRM4-202ENST00000455814 ADGRL2O95490 1459 aa13.27□□□□□ -0.29
LYRM4-202ENST00000455814 IQSEC2Q5JU85 1478 aa13.27□□□□□ -0.29
LYRM4-202ENST00000455814 ZNF142P52746 1687 aaPredicted RBP13.27□□□□□ -0.29
LYRM4-202ENST00000455814 ITGAEP38570 1179 aa13.26□□□□□ -0.29
LYRM4-202ENST00000455814 ERVK-7P63135 1459 aa13.26□□□□□ -0.29
LYRM4-202ENST00000455814 TXNDC2Q86VQ3 553 aa13.26□□□□□ -0.29
LYRM4-202ENST00000455814 ROCK1Q13464 1354 aa13.25□□□□□ -0.29
LYRM4-202ENST00000455814 SPATA31D1Q6ZQQ2 1576 aa13.24□□□□□ -0.29
LYRM4-202ENST00000455814 ZNF335Q9H4Z2 1342 aaPredicted RBP13.24□□□□□ -0.29
LYRM4-202ENST00000455814 TOM1O60784 492 aa13.24□□□□□ -0.29
LYRM4-202ENST00000455814 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
LYRM4-202ENST00000455814 CROCC2H7BZ55 1655 aa13.23□□□□□ -0.29
LYRM4-202ENST00000455814 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
LYRM4-202ENST00000455814 NPHP4O75161 1426 aaPredicted RBP13.22□□□□□ -0.29
LYRM4-202ENST00000455814 UBAP1LF5GYI3 381 aa13.22□□□□□ -0.29
LYRM4-202ENST00000455814 IDI1Q13907 227 aa13.21□□□□□ -0.29
LYRM4-202ENST00000455814 LMTK2Q8IWU2 1503 aa13.21□□□□□ -0.29
LYRM4-202ENST00000455814 BCANQ96GW7 911 aa13.2□□□□□ -0.3
LYRM4-202ENST00000455814 MED14O60244 1454 aa13.19□□□□□ -0.3
LYRM4-202ENST00000455814 RPRD2Q5VT52 1461 aaKnown RBP13.19□□□□□ -0.3
LYRM4-202ENST00000455814 LTBP4Q8N2S1 1624 aa13.19□□□□□ -0.3
LYRM4-202ENST00000455814 CPS1P31327 1500 aa13.18□□□□□ -0.3
LYRM4-202ENST00000455814 MROH1Q8NDA8 1641 aa13.18□□□□□ -0.3
LYRM4-202ENST00000455814 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.18□□□□□ -0.3
LYRM4-202ENST00000455814 NUP155O75694 1391 aa13.18□□□□□ -0.3
LYRM4-202ENST00000455814 TMEM2Q9UHN6 1383 aa13.17□□□□□ -0.3
LYRM4-202ENST00000455814 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
LYRM4-202ENST00000455814 SCAF11Q99590 1463 aaKnown RBP13.16□□□□□ -0.3
LYRM4-202ENST00000455814 PPP1R15AO75807 674 aaPredicted RBP13.16□□□□□ -0.3
LYRM4-202ENST00000455814 CHGAP10645 457 aaKnown RBP13.16□□□□□ -0.3
LYRM4-202ENST00000455814 ACIN1Q9UKV3 1341 aaKnown RBP13.15□□□□□ -0.3
LYRM4-202ENST00000455814 CEP152O94986 1710 aa13.15□□□□□ -0.3
LYRM4-202ENST00000455814 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
LYRM4-202ENST00000455814 NOS1P29475 1434 aa13.14□□□□□ -0.31
LYRM4-202ENST00000455814 LTKP29376 864 aa13.14□□□□□ -0.31
LYRM4-202ENST00000455814 VWDEQ8N2E2 1590 aa13.14□□□□□ -0.31
LYRM4-202ENST00000455814 POLR1AO95602 1720 aaPredicted RBP13.13□□□□□ -0.31
LYRM4-202ENST00000455814 SLIT1O75093 1534 aa13.13□□□□□ -0.31
LYRM4-202ENST00000455814 EFCAB6Q5THR3 1501 aa13.13□□□□□ -0.31
LYRM4-202ENST00000455814 ARHGAP23Q9P227 1491 aa13.12□□□□□ -0.31
LYRM4-202ENST00000455814 RRBP1Q9P2E9 1410 aaKnown RBP13.12□□□□□ -0.31
LYRM4-202ENST00000455814 KCNA6P17658 529 aa13.11□□□□□ -0.31
LYRM4-202ENST00000455814 TRIM52Q96A61 297 aa13.11□□□□□ -0.31
LYRM4-202ENST00000455814 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
LYRM4-202ENST00000455814 PIP4K2BP78356 416 aa13.1□□□□□ -0.31
LYRM4-202ENST00000455814 CFAP65Q6ZU64 1925 aaKnown RBP13.09□□□□□ -0.31
LYRM4-202ENST00000455814 IQGAP1P46940 1657 aa13.09□□□□□ -0.31
LYRM4-202ENST00000455814 UBR1Q8IWV7 1749 aa13.09□□□□□ -0.31
LYRM4-202ENST00000455814 KDM5AP29375 1690 aaKnown RBP13.08□□□□□ -0.31
LYRM4-202ENST00000455814 PROSER2Q86WR7 435 aaPredicted RBP13.08□□□□□ -0.32
LYRM4-202ENST00000455814 TET3O43151 1660 aa13.08□□□□□ -0.32
LYRM4-202ENST00000455814 SLC26A8Q96RN1 970 aa13.07□□□□□ -0.32
LYRM4-202ENST00000455814 TBX22Q9Y458 520 aa13.07□□□□□ -0.32
LYRM4-202ENST00000455814 UNC13BO14795 1591 aa13.07□□□□□ -0.32
LYRM4-202ENST00000455814 PIK3C2BO00750 1634 aa13.06□□□□□ -0.32
LYRM4-202ENST00000455814 ZNF326Q5BKZ1 582 aaKnown RBP13.06□□□□□ -0.32
LYRM4-202ENST00000455814 ADGRB3O60242 1522 aa13.05□□□□□ -0.32
LYRM4-202ENST00000455814 DISP3Q9P2K9 1392 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms