RNA–Protein interactions for RNA: ENST00000455814.2

LYRM4-202, Transcript of LYR motif containing 4, humanhuman

TSL 3

Gene LYRM4, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4-202ENST00000455814 NISCHQ9Y2I1 1504 aa21.19■□□□□ 0.98
LYRM4-202ENST00000455814 CCDC180Q9P1Z9 1646 aa18.88■□□□□ 0.61
LYRM4-202ENST00000455814 ABCC9O60706 1549 aa18.74■□□□□ 0.59
LYRM4-202ENST00000455814 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
LYRM4-202ENST00000455814 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
LYRM4-202ENST00000455814 NACADO15069 1562 aa17.91■□□□□ 0.46
LYRM4-202ENST00000455814 MYO15BQ96JP2 1530 aa17.72■□□□□ 0.43
LYRM4-202ENST00000455814 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
LYRM4-202ENST00000455814 DCAF1Q9Y4B6 1507 aa17.54■□□□□ 0.4
LYRM4-202ENST00000455814 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
LYRM4-202ENST00000455814 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
LYRM4-202ENST00000455814 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
LYRM4-202ENST00000455814 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.36
LYRM4-202ENST00000455814 BICRAQ9NZM4 1560 aa17.26■□□□□ 0.35
LYRM4-202ENST00000455814 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
LYRM4-202ENST00000455814 EIF4G1Q04637 1599 aaKnown RBP16.92■□□□□ 0.3
LYRM4-202ENST00000455814 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
LYRM4-202ENST00000455814 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
LYRM4-202ENST00000455814 NCAPD3P42695 1498 aa16.54■□□□□ 0.24
LYRM4-202ENST00000455814 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
LYRM4-202ENST00000455814 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
LYRM4-202ENST00000455814 ATAD2BQ9ULI0 1458 aa16.47■□□□□ 0.23
LYRM4-202ENST00000455814 SMARCA4P51532 1647 aa16.43■□□□□ 0.22
LYRM4-202ENST00000455814 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
LYRM4-202ENST00000455814 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
LYRM4-202ENST00000455814 PEG3Q9GZU2 1588 aa16.29■□□□□ 0.2
LYRM4-202ENST00000455814 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
LYRM4-202ENST00000455814 MROH2BQ7Z745 1585 aa16.26■□□□□ 0.19
LYRM4-202ENST00000455814 CUX2O14529 1486 aa16.15■□□□□ 0.18
LYRM4-202ENST00000455814 PDS5BQ9NTI5 1447 aa16.12■□□□□ 0.17
LYRM4-202ENST00000455814 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
LYRM4-202ENST00000455814 CADPSQ9ULU8 1353 aa16.08■□□□□ 0.16
LYRM4-202ENST00000455814 NESP48681 1621 aa16.08■□□□□ 0.16
LYRM4-202ENST00000455814 RSF1Q96T23 1441 aaPredicted RBP16.06■□□□□ 0.16
LYRM4-202ENST00000455814 WIZO95785 1651 aa16.04■□□□□ 0.16
LYRM4-202ENST00000455814 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
LYRM4-202ENST00000455814 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
LYRM4-202ENST00000455814 CFTRP13569 1480 aa15.87■□□□□ 0.13
LYRM4-202ENST00000455814 MRC2Q9UBG0 1479 aa15.86■□□□□ 0.13
LYRM4-202ENST00000455814 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
LYRM4-202ENST00000455814 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
LYRM4-202ENST00000455814 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.13
LYRM4-202ENST00000455814 KIF21AQ7Z4S6 1674 aa15.81■□□□□ 0.12
LYRM4-202ENST00000455814 CCDC88BA6NC98 1476 aa15.77■□□□□ 0.11
LYRM4-202ENST00000455814 WDR62O43379 1518 aa15.75■□□□□ 0.11
LYRM4-202ENST00000455814 ABCC8Q09428 1581 aa15.66■□□□□ 0.1
LYRM4-202ENST00000455814 SUPT5HO00267 1087 aaKnown RBP15.62■□□□□ 0.09
LYRM4-202ENST00000455814 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
LYRM4-202ENST00000455814 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
LYRM4-202ENST00000455814 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
LYRM4-202ENST00000455814 IFT140Q96RY7 1462 aa15.56■□□□□ 0.08
LYRM4-202ENST00000455814 TOPBP1Q92547 1522 aa15.52■□□□□ 0.07
LYRM4-202ENST00000455814 DNMBPQ6XZF7 1577 aa15.48■□□□□ 0.07
LYRM4-202ENST00000455814 SOGA1O94964 1423 aa15.41■□□□□ 0.06
LYRM4-202ENST00000455814 ZNF608Q9ULD9 1512 aaPredicted RBP15.38■□□□□ 0.05
LYRM4-202ENST00000455814 POLA1P09884 1462 aaPredicted RBP15.37■□□□□ 0.05
LYRM4-202ENST00000455814 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
LYRM4-202ENST00000455814 FBLN2P98095 1184 aa15.35■□□□□ 0.05
LYRM4-202ENST00000455814 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.05
LYRM4-202ENST00000455814 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
LYRM4-202ENST00000455814 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
LYRM4-202ENST00000455814 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
LYRM4-202ENST00000455814 RAD54L2Q9Y4B4 1467 aa15.3■□□□□ 0.04
LYRM4-202ENST00000455814 TARBP1Q13395 1621 aaKnown RBP15.28■□□□□ 0.04
LYRM4-202ENST00000455814 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
LYRM4-202ENST00000455814 WDR97A6NE52 1622 aa15.28■□□□□ 0.04
LYRM4-202ENST00000455814 CUX1P39880 1505 aa15.27■□□□□ 0.03
LYRM4-202ENST00000455814 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
LYRM4-202ENST00000455814 GRIN2BQ13224 1484 aa15.23■□□□□ 0.03
LYRM4-202ENST00000455814 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
LYRM4-202ENST00000455814 GAPVD1Q14C86 1478 aa15.19■□□□□ 0.02
LYRM4-202ENST00000455814 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
LYRM4-202ENST00000455814 ABCA10Q8WWZ4 1543 aa15.17■□□□□ 0.02
LYRM4-202ENST00000455814 CYB5RLQ6IPT4 315 aa15.14■□□□□ 0.01
LYRM4-202ENST00000455814 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
LYRM4-202ENST00000455814 ARHGEF11O15085 1522 aa15.12■□□□□ 0.01
LYRM4-202ENST00000455814 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
LYRM4-202ENST00000455814 TOP2BQ02880 1626 aa15.1■□□□□ 0.01
LYRM4-202ENST00000455814 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
LYRM4-202ENST00000455814 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
LYRM4-202ENST00000455814 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
LYRM4-202ENST00000455814 CHD1O14646 1710 aa15.09■□□□□ 0.01
LYRM4-202ENST00000455814 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
LYRM4-202ENST00000455814 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
LYRM4-202ENST00000455814 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
LYRM4-202ENST00000455814 PBRM1Q86U86 1689 aa15□□□□□ -0.01
LYRM4-202ENST00000455814 ERICH3Q5RHP9 1530 aa15□□□□□ -0.01
LYRM4-202ENST00000455814 CLASP1Q7Z460 1538 aa14.98□□□□□ -0.01
LYRM4-202ENST00000455814 GRIN2AQ12879 1464 aa14.98□□□□□ -0.01
LYRM4-202ENST00000455814 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
LYRM4-202ENST00000455814 KIF27Q86VH2 1401 aa14.97□□□□□ -0.01
LYRM4-202ENST00000455814 ARAP1Q96P48 1450 aa14.95□□□□□ -0.02
LYRM4-202ENST00000455814 NUP160Q12769 1436 aa14.92□□□□□ -0.02
LYRM4-202ENST00000455814 ADAMTS12P58397 1594 aa14.92□□□□□ -0.02
LYRM4-202ENST00000455814 JPH4Q96JJ6 628 aa14.91□□□□□ -0.02
LYRM4-202ENST00000455814 IGF1RP08069 1367 aa14.88□□□□□ -0.03
LYRM4-202ENST00000455814 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
LYRM4-202ENST00000455814 CARMIL1Q5VZK9 1371 aa14.84□□□□□ -0.03
LYRM4-202ENST00000455814 CEP170Q5SW79 1584 aa14.82□□□□□ -0.04
LYRM4-202ENST00000455814 PRG4Q92954 1404 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 243.8 ms