RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 ABCA9Q8IUA7 1624 aa25.34■■□□□ 1.65
MECP2-205ENST00000453960 RTEL1-TNFRSF6BF6WH68 1400 aa25.34■■□□□ 1.65
MECP2-205ENST00000453960 USP47Q96K76 1375 aa25.33■■□□□ 1.65
MECP2-205ENST00000453960 WDR7Q9Y4E6 1490 aa25.32■■□□□ 1.64
MECP2-205ENST00000453960 SUPT16HQ9Y5B9 1047 aaKnown RBP25.3■■□□□ 1.64
MECP2-205ENST00000453960 TRAPPC8Q9Y2L5 1435 aa25.29■■□□□ 1.64
MECP2-205ENST00000453960 TRPM1Q7Z4N2 1603 aa25.29■■□□□ 1.64
MECP2-205ENST00000453960 ZFYVE16Q7Z3T8 1539 aa25.28■■□□□ 1.64
MECP2-205ENST00000453960 LAMC1P11047 1609 aa25.27■■□□□ 1.64
MECP2-205ENST00000453960 DEPDC5O75140 1603 aa25.27■■□□□ 1.64
MECP2-205ENST00000453960 CYB5RLQ6IPT4 315 aa25.26■■□□□ 1.63
MECP2-205ENST00000453960 CCDC144AA2RUR9 1427 aa25.25■■□□□ 1.63
MECP2-205ENST00000453960 PRKRIP1Q9H875 184 aaPredicted RBP25.25■■□□□ 1.63
MECP2-205ENST00000453960 INO80Q9ULG1 1556 aaPredicted RBP25.24■■□□□ 1.63
MECP2-205ENST00000453960 PRAG1Q86YV5 1406 aa25.22■■□□□ 1.63
MECP2-205ENST00000453960 DHX29Q7Z478 1369 aaKnown RBP25.22■■□□□ 1.63
MECP2-205ENST00000453960 GPRASP1Q5JY77 1395 aa25.19■■□□□ 1.62
MECP2-205ENST00000453960 A2MP01023 1474 aa25.19■■□□□ 1.62
MECP2-205ENST00000453960 ROCK2O75116 1388 aaKnown RBP25.19■■□□□ 1.62
MECP2-205ENST00000453960 VWDEQ8N2E2 1590 aa25.17■■□□□ 1.62
MECP2-205ENST00000453960 E9PCH4 1651 aa25.17■■□□□ 1.62
MECP2-205ENST00000453960 EIF2AK4Q9P2K8 1649 aaKnown RBP25.16■■□□□ 1.62
MECP2-205ENST00000453960 FANCAO15360 1455 aa25.15■■□□□ 1.62
MECP2-205ENST00000453960 ATP7AQ04656 1500 aa25.14■■□□□ 1.62
MECP2-205ENST00000453960 DCAF11Q8TEB1 546 aa25.13■■□□□ 1.61
MECP2-205ENST00000453960 SPAG9O60271 1321 aaKnown RBP25.13■■□□□ 1.61
MECP2-205ENST00000453960 TET3O43151 1660 aa25.13■■□□□ 1.61
MECP2-205ENST00000453960 CARD11Q9BXL7 1154 aa25.12■■□□□ 1.61
MECP2-205ENST00000453960 PRDM15P57071 1507 aaPredicted RBP25.12■■□□□ 1.61
MECP2-205ENST00000453960 TRPM2O94759 1503 aa25.11■■□□□ 1.61
MECP2-205ENST00000453960 RNF17Q9BXT8 1623 aaKnown RBP25.11■■□□□ 1.61
MECP2-205ENST00000453960 ASXL2Q76L83 1435 aa25.11■■□□□ 1.61
MECP2-205ENST00000453960 ZNF326Q5BKZ1 582 aaKnown RBP25.11■■□□□ 1.61
MECP2-205ENST00000453960 SPHKAPQ2M3C7 1700 aa25.1■■□□□ 1.61
MECP2-205ENST00000453960 PTPRTO14522 1441 aa25.1■■□□□ 1.61
MECP2-205ENST00000453960 NEURL4Q96JN8 1562 aa25.09■■□□□ 1.61
MECP2-205ENST00000453960 CEP152O94986 1710 aa25.09■■□□□ 1.61
MECP2-205ENST00000453960 CCDC184Q52MB2 194 aa25.08■■□□□ 1.61
MECP2-205ENST00000453960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.06■■□□□ 1.6
MECP2-205ENST00000453960 ADGRL1O94910 1474 aa25.06■■□□□ 1.6
MECP2-205ENST00000453960 MROH1Q8NDA8 1641 aa25.05■■□□□ 1.6
MECP2-205ENST00000453960 AFAP1Q8N556 730 aa25.05■■□□□ 1.6
MECP2-205ENST00000453960 KDM2AQ9Y2K7 1162 aa25.04■■□□□ 1.6
MECP2-205ENST00000453960 KIDINS220Q9ULH0 1771 aa25.03■■□□□ 1.6
MECP2-205ENST00000453960 CFAP74Q9C0B2 1584 aa25.02■■□□□ 1.6
MECP2-205ENST00000453960 ST20-MTHFSA0A0A6YYL1 179 aa25.02■■□□□ 1.6
MECP2-205ENST00000453960 TRHP20396 242 aaPredicted RBP25.01■■□□□ 1.59
MECP2-205ENST00000453960 HNRNPUQ00839 825 aaKnown RBP eCLIP25.01■■□□□ 1.59
MECP2-205ENST00000453960 SCAPERQ9BY12 1400 aa25.01■■□□□ 1.59
MECP2-205ENST00000453960 MADDQ8WXG6 1647 aa25.01■■□□□ 1.59
MECP2-205ENST00000453960 KTN1Q86UP2 1357 aaKnown RBP25■■□□□ 1.59
MECP2-205ENST00000453960 CLTCL1P53675 1640 aa24.99■■□□□ 1.59
MECP2-205ENST00000453960 STAC3Q96MF2 364 aa24.98■■□□□ 1.59
MECP2-205ENST00000453960 MRS2Q9HD23 443 aa24.98■■□□□ 1.59
MECP2-205ENST00000453960 COL17A1Q9UMD9 1497 aaPredicted RBP24.98■■□□□ 1.59
MECP2-205ENST00000453960 IQGAP1P46940 1657 aa24.96■■□□□ 1.59
MECP2-205ENST00000453960 LMTK2Q8IWU2 1503 aa24.95■■□□□ 1.59
MECP2-205ENST00000453960 KIAA1210Q9ULL0 1709 aa24.94■■□□□ 1.58
MECP2-205ENST00000453960 ZBED9Q6R2W3 1325 aa24.94■■□□□ 1.58
MECP2-205ENST00000453960 ZNF518AQ6AHZ1 1483 aa24.94■■□□□ 1.58
MECP2-205ENST00000453960 NBPF1Q3BBV0 1214 aa24.93■■□□□ 1.58
MECP2-205ENST00000453960 FKBP8Q14318 412 aa24.92■■□□□ 1.58
MECP2-205ENST00000453960 RGL3Q3MIN7 710 aa24.92■■□□□ 1.58
MECP2-205ENST00000453960 KANK1Q14678 1352 aa24.91■■□□□ 1.58
MECP2-205ENST00000453960 EFCAB6Q5THR3 1501 aa24.9■■□□□ 1.58
MECP2-205ENST00000453960 TESK2Q96S53 571 aa24.9■■□□□ 1.58
MECP2-205ENST00000453960 MLH3Q9UHC1 1453 aa24.89■■□□□ 1.57
MECP2-205ENST00000453960 NEFLP07196 543 aa24.88■■□□□ 1.57
MECP2-205ENST00000453960 POGZQ7Z3K3 1410 aa24.87■■□□□ 1.57
MECP2-205ENST00000453960 IFT172Q9UG01 1749 aa24.86■■□□□ 1.57
MECP2-205ENST00000453960 PPRC1Q5VV67 1664 aaKnown RBP24.85■■□□□ 1.57
MECP2-205ENST00000453960 RALBP1Q15311 655 aa24.84■■□□□ 1.57
MECP2-205ENST00000453960 CD109Q6YHK3 1445 aa24.84■■□□□ 1.57
MECP2-205ENST00000453960 FAM9BQ8IZU0 186 aa24.83■■□□□ 1.57
MECP2-205ENST00000453960 KIF1BO60333 1816 aa24.83■■□□□ 1.57
MECP2-205ENST00000453960 FRMPD1Q5SYB0 1578 aa24.83■■□□□ 1.57
MECP2-205ENST00000453960 HECW2Q9P2P5 1572 aa24.83■■□□□ 1.57
MECP2-205ENST00000453960 BRD4O60885 1362 aaPredicted RBP24.83■■□□□ 1.57
MECP2-205ENST00000453960 NPM1P06748 294 aaKnown RBP eCLIP24.83■■□□□ 1.57
MECP2-205ENST00000453960 WASHC2CQ9Y4E1 1318 aa24.82■■□□□ 1.56
MECP2-205ENST00000453960 MYOM2P54296 1465 aa24.82■■□□□ 1.56
MECP2-205ENST00000453960 LRPPRCP42704 1394 aaKnown RBP24.82■■□□□ 1.56
MECP2-205ENST00000453960 PARD3Q8TEW0 1356 aa24.81■■□□□ 1.56
MECP2-205ENST00000453960 NEO1Q92859 1461 aa24.81■■□□□ 1.56
MECP2-205ENST00000453960 KIF3BO15066 747 aa24.81■■□□□ 1.56
MECP2-205ENST00000453960 PER1O15534 1290 aaPredicted RBP24.81■■□□□ 1.56
MECP2-205ENST00000453960 DISP3Q9P2K9 1392 aa24.8■■□□□ 1.56
MECP2-205ENST00000453960 PNISRQ8TF01 805 aaKnown RBP24.8■■□□□ 1.56
MECP2-205ENST00000453960 POLR3GLQ9BT43 218 aa24.8■■□□□ 1.56
MECP2-205ENST00000453960 ERICH6BQ5W0A0 696 aa24.79■■□□□ 1.56
MECP2-205ENST00000453960 MYBBP1AQ9BQG0 1328 aaKnown RBP24.79■■□□□ 1.56
MECP2-205ENST00000453960 MAP3K4Q9Y6R4 1608 aa24.79■■□□□ 1.56
MECP2-205ENST00000453960 SCAF11Q99590 1463 aaKnown RBP24.77■■□□□ 1.56
MECP2-205ENST00000453960 ABCA6Q8N139 1617 aa24.76■■□□□ 1.55
MECP2-205ENST00000453960 NRXN1Q9ULB1 1477 aa24.75■■□□□ 1.55
MECP2-205ENST00000453960 MROH2AA6NES4 1674 aa24.74■■□□□ 1.55
MECP2-205ENST00000453960 SMG6Q86US8 1419 aaKnown RBP24.73■■□□□ 1.55
MECP2-205ENST00000453960 ADGRB3O60242 1522 aa24.72■■□□□ 1.55
MECP2-205ENST00000453960 ZMYM4Q5VZL5 1548 aa24.72■■□□□ 1.55
MECP2-205ENST00000453960 TMF1P82094 1093 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms