RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 NISCHQ9Y2I1 1504 aa39.51■■■■□ 3.91
MECP2-205ENST00000453960 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
MECP2-205ENST00000453960 ZCCHC6Q5VYS8 1495 aaKnown RBP33.39■■■□□ 2.94
MECP2-205ENST00000453960 DCAF1Q9Y4B6 1507 aa32.75■■■□□ 2.83
MECP2-205ENST00000453960 SHROOM4Q9ULL8 1493 aa32.6■■■□□ 2.81
MECP2-205ENST00000453960 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
MECP2-205ENST00000453960 DCAF8L2P0C7V8 631 aa32.03■■■□□ 2.72
MECP2-205ENST00000453960 SUPT5HO00267 1087 aaKnown RBP31.75■■■□□ 2.67
MECP2-205ENST00000453960 NACADO15069 1562 aa31.53■■■□□ 2.64
MECP2-205ENST00000453960 ABCC9O60706 1549 aa31.5■■■□□ 2.63
MECP2-205ENST00000453960 SCRIBQ14160 1630 aa31.36■■■□□ 2.61
MECP2-205ENST00000453960 RB1CC1Q8TDY2 1594 aa31.01■■■□□ 2.56
MECP2-205ENST00000453960 CHIC1Q5VXU3 224 aa30.98■■■□□ 2.55
MECP2-205ENST00000453960 RSF1Q96T23 1441 aaPredicted RBP30.96■■■□□ 2.55
MECP2-205ENST00000453960 CECR2Q9BXF3 1484 aa30.6■■■□□ 2.49
MECP2-205ENST00000453960 UNC13AQ9UPW8 1703 aa30.58■■■□□ 2.49
MECP2-205ENST00000453960 MROH2BQ7Z745 1585 aa30.55■■■□□ 2.48
MECP2-205ENST00000453960 BAZ1AQ9NRL2 1556 aaPredicted RBP30.41■■■□□ 2.46
MECP2-205ENST00000453960 WIZO95785 1651 aa30.35■■■□□ 2.45
MECP2-205ENST00000453960 SMARCA4P51532 1647 aa30.2■■■□□ 2.43
MECP2-205ENST00000453960 BICRAQ9NZM4 1560 aa30.18■■■□□ 2.42
MECP2-205ENST00000453960 TOP2AP11388 1531 aaKnown RBP30.05■■■□□ 2.4
MECP2-205ENST00000453960 EIF4G1Q04637 1599 aaKnown RBP30.02■■■□□ 2.4
MECP2-205ENST00000453960 PEG3Q9GZU2 1588 aa29.88■■■□□ 2.37
MECP2-205ENST00000453960 TRIM41Q8WV44 630 aa29.82■■■□□ 2.36
MECP2-205ENST00000453960 SMARCA2P51531 1590 aa29.82■■■□□ 2.36
MECP2-205ENST00000453960 LOC105371045A0A1W2PR82 267 aa29.76■■■□□ 2.35
MECP2-205ENST00000453960 CCDC88BA6NC98 1476 aa29.73■■■□□ 2.35
MECP2-205ENST00000453960 PABPN1Q86U42 306 aaKnown RBP eCLIP29.67■■■□□ 2.34
MECP2-205ENST00000453960 DNAJC5BQ9UF47 199 aa29.64■■■□□ 2.34
MECP2-205ENST00000453960 ATAD2BQ9ULI0 1458 aa29.47■■■□□ 2.31
MECP2-205ENST00000453960 ABCC8Q09428 1581 aa29.35■■■□□ 2.29
MECP2-205ENST00000453960 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
MECP2-205ENST00000453960 FAM9AQ8IZU1 332 aaPredicted RBP29.23■■■□□ 2.27
MECP2-205ENST00000453960 PCGF6Q9BYE7 350 aa29.22■■■□□ 2.27
MECP2-205ENST00000453960 HRCP23327 699 aa29.17■■■□□ 2.26
MECP2-205ENST00000453960 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
MECP2-205ENST00000453960 EEA1Q15075 1411 aa29.11■■■□□ 2.25
MECP2-205ENST00000453960 NCAPD3P42695 1498 aa29.1■■■□□ 2.25
MECP2-205ENST00000453960 TRIM26Q12899 539 aaPredicted RBP29.08■■■□□ 2.25
MECP2-205ENST00000453960 WRNQ14191 1432 aaPredicted RBP eCLIP29.05■■■□□ 2.24
MECP2-205ENST00000453960 SYNJ1O43426 1573 aa28.97■■■□□ 2.23
MECP2-205ENST00000453960 SOGA1O94964 1423 aa28.97■■■□□ 2.23
MECP2-205ENST00000453960 RUSC2Q8N2Y8 1516 aa28.84■■■□□ 2.21
MECP2-205ENST00000453960 TNIKQ9UKE5 1360 aa28.81■■■□□ 2.2
MECP2-205ENST00000453960 TOP2BQ02880 1626 aa28.81■■■□□ 2.2
MECP2-205ENST00000453960 BIVM-ERCC5R4GMW8 1640 aa28.8■■■□□ 2.2
MECP2-205ENST00000453960 CSRNP3Q8WYN3 585 aa28.8■■■□□ 2.2
MECP2-205ENST00000453960 KIF21BO75037 1637 aa28.75■■■□□ 2.19
MECP2-205ENST00000453960 GOLGA3Q08378 1498 aa28.72■■■□□ 2.19
MECP2-205ENST00000453960 EHMT2Q96KQ7 1210 aa28.7■■■□□ 2.19
MECP2-205ENST00000453960 CEP162Q5TB80 1403 aa28.68■■■□□ 2.18
MECP2-205ENST00000453960 PRDM2Q13029 1718 aa28.68■■■□□ 2.18
MECP2-205ENST00000453960 CFTRP13569 1480 aa28.68■■■□□ 2.18
MECP2-205ENST00000453960 CEP164Q9UPV0 1460 aa28.64■■■□□ 2.18
MECP2-205ENST00000453960 CUX1P39880 1505 aa28.51■■■□□ 2.15
MECP2-205ENST00000453960 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
MECP2-205ENST00000453960 ERICH3Q5RHP9 1530 aa28.4■■■□□ 2.14
MECP2-205ENST00000453960 UBTFP17480 764 aaKnown RBP28.38■■■□□ 2.13
MECP2-205ENST00000453960 RAPGEF2Q9Y4G8 1499 aa28.35■■■□□ 2.13
MECP2-205ENST00000453960 CADPSQ9ULU8 1353 aa28.35■■■□□ 2.13
MECP2-205ENST00000453960 PRXQ9BXM0 1461 aa28.35■■■□□ 2.13
MECP2-205ENST00000453960 ZEB1P37275 1124 aaPredicted RBP28.35■■■□□ 2.13
MECP2-205ENST00000453960 PPARGC1BQ86YN6 1023 aaKnown RBP28.28■■■□□ 2.12
MECP2-205ENST00000453960 CLIP1P30622 1438 aa28.25■■■□□ 2.11
MECP2-205ENST00000453960 KIF27Q86VH2 1401 aa28.23■■■□□ 2.11
MECP2-205ENST00000453960 VPS8Q8N3P4 1428 aa28.17■■■□□ 2.1
MECP2-205ENST00000453960 FANCD2Q9BXW9 1451 aa28.03■■■□□ 2.08
MECP2-205ENST00000453960 FGD5Q6ZNL6 1462 aa28.02■■■□□ 2.08
MECP2-205ENST00000453960 DNMBPQ6XZF7 1577 aa27.99■■■□□ 2.07
MECP2-205ENST00000453960 LAMC3Q9Y6N6 1575 aa27.96■■■□□ 2.07
MECP2-205ENST00000453960 ARAP1Q96P48 1450 aa27.96■■■□□ 2.07
MECP2-205ENST00000453960 CUX2O14529 1486 aa27.95■■■□□ 2.07
MECP2-205ENST00000453960 IGF1RP08069 1367 aa27.94■■■□□ 2.06
MECP2-205ENST00000453960 TOPBP1Q92547 1522 aa27.86■■■□□ 2.05
MECP2-205ENST00000453960 ABCA10Q8WWZ4 1543 aa27.85■■■□□ 2.05
MECP2-205ENST00000453960 NESP48681 1621 aa27.83■■■□□ 2.05
MECP2-205ENST00000453960 ARHGAP35Q9NRY4 1499 aa27.79■■■□□ 2.04
MECP2-205ENST00000453960 POLA1P09884 1462 aaPredicted RBP27.79■■■□□ 2.04
MECP2-205ENST00000453960 CARMIL1Q5VZK9 1371 aa27.76■■■□□ 2.04
MECP2-205ENST00000453960 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
MECP2-205ENST00000453960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.74■■■□□ 2.03
MECP2-205ENST00000453960 TTBK1Q5TCY1 1321 aaPredicted RBP27.72■■■□□ 2.03
MECP2-205ENST00000453960 APLP2Q06481 763 aa27.69■■■□□ 2.02
MECP2-205ENST00000453960 CCER1Q8TC90 406 aaPredicted RBP27.69■■■□□ 2.02
MECP2-205ENST00000453960 CUL7Q14999 1698 aa27.69■■■□□ 2.02
MECP2-205ENST00000453960 URB2Q14146 1524 aaKnown RBP27.68■■■□□ 2.02
MECP2-205ENST00000453960 RAD54L2Q9Y4B4 1467 aa27.66■■■□□ 2.02
MECP2-205ENST00000453960 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.01
MECP2-205ENST00000453960 MAP3K1Q13233 1512 aa27.64■■■□□ 2.01
MECP2-205ENST00000453960 ABCA5Q8WWZ7 1642 aa27.59■■■□□ 2.01
MECP2-205ENST00000453960 RANGAP1P46060 587 aaPredicted RBP27.57■■■□□ 2
MECP2-205ENST00000453960 KIF21AQ7Z4S6 1674 aa27.57■■■□□ 2
MECP2-205ENST00000453960 RRBP1Q9P2E9 1410 aaKnown RBP27.52■■■□□ 2
MECP2-205ENST00000453960 CTTNBP2Q8WZ74 1663 aa27.52■■■□□ 2
MECP2-205ENST00000453960 EFCAB5A4FU69 1503 aa27.49■■□□□ 1.99
MECP2-205ENST00000453960 TIAM1Q13009 1591 aa27.48■■□□□ 1.99
MECP2-205ENST00000453960 KANK4Q5T7N3 995 aaPredicted RBP27.47■■□□□ 1.99
MECP2-205ENST00000453960 TARBP1Q13395 1621 aaKnown RBP27.45■■□□□ 1.98
MECP2-205ENST00000453960 FHAD1B1AJZ9 1412 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms