RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TCOF1Q13428 1488 aaKnown RBP15.08■□□□□ 0
USP54-207ENST00000451492 ZC3H13Q5T200 1668 aaKnown RBP15.07■□□□□ 0
USP54-207ENST00000451492 CFAP65Q6ZU64 1925 aaKnown RBP15.07■□□□□ 0
USP54-207ENST00000451492 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
USP54-207ENST00000451492 ABCC5O15440 1437 aa15.06■□□□□ 0
USP54-207ENST00000451492 NPATQ14207 1427 aa15.06■□□□□ 0
USP54-207ENST00000451492 PTPRKQ15262 1439 aa15.06■□□□□ 0
USP54-207ENST00000451492 DUOX2Q9NRD8 1548 aa15.06■□□□□ 0
USP54-207ENST00000451492 CEP170BQ9Y4F5 1589 aaPredicted RBP15.06■□□□□ 0
USP54-207ENST00000451492 CAMSAP1Q5T5Y3 1602 aa15.06■□□□□ 0
USP54-207ENST00000451492 MROH1Q8NDA8 1641 aa15.05■□□□□ -0
USP54-207ENST00000451492 ILDR1Q86SU0 546 aaPredicted RBP15.04■□□□□ -0
USP54-207ENST00000451492 PPARGC1BQ86YN6 1023 aaKnown RBP15.04■□□□□ -0
USP54-207ENST00000451492 FAM135AQ9P2D6 1515 aa15.03■□□□□ -0
USP54-207ENST00000451492 KIF15Q9NS87 1388 aa15.03■□□□□ -0
USP54-207ENST00000451492 FAM50AQ14320 339 aaKnown RBP15.03■□□□□ -0
USP54-207ENST00000451492 CHIC2Q9UKJ5 165 aa15.03■□□□□ -0
USP54-207ENST00000451492 WASHC2CQ9Y4E1 1318 aa15.02■□□□□ -0
USP54-207ENST00000451492 RRP7BPQ9NSQ0 103 aa15.02■□□□□ -0
USP54-207ENST00000451492 ABCC3O15438 1527 aa15.02□□□□□ -0.01
USP54-207ENST00000451492 PZPP20742 1482 aa15.01□□□□□ -0.01
USP54-207ENST00000451492 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
USP54-207ENST00000451492 PRDM15P57071 1507 aaPredicted RBP14.99□□□□□ -0.01
USP54-207ENST00000451492 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
USP54-207ENST00000451492 NCOA1Q15788 1441 aa14.99□□□□□ -0.01
USP54-207ENST00000451492 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
USP54-207ENST00000451492 DEPDC5O75140 1603 aa14.99□□□□□ -0.01
USP54-207ENST00000451492 FBXO31Q5XUX0 539 aaPredicted RBP14.98□□□□□ -0.01
USP54-207ENST00000451492 TNRQ92752 1358 aa14.98□□□□□ -0.01
USP54-207ENST00000451492 A2ML1A8K2U0 1454 aa14.96□□□□□ -0.01
USP54-207ENST00000451492 ANKRD30AQ9BXX3 1397 aa14.96□□□□□ -0.02
USP54-207ENST00000451492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.95□□□□□ -0.02
USP54-207ENST00000451492 NCKAP5LQ9HCH0 1330 aa14.94□□□□□ -0.02
USP54-207ENST00000451492 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
USP54-207ENST00000451492 SPATA31D1Q6ZQQ2 1576 aa14.94□□□□□ -0.02
USP54-207ENST00000451492 ERVK-7P63135 1459 aa14.93□□□□□ -0.02
USP54-207ENST00000451492 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
USP54-207ENST00000451492 PLA2R1Q13018 1463 aa14.92□□□□□ -0.02
USP54-207ENST00000451492 UGGT1Q9NYU2 1555 aa14.92□□□□□ -0.02
USP54-207ENST00000451492 PTPRTO14522 1441 aa14.92□□□□□ -0.02
USP54-207ENST00000451492 ITGAEP38570 1179 aa14.91□□□□□ -0.02
USP54-207ENST00000451492 UBR1Q8IWV7 1749 aa14.9□□□□□ -0.02
USP54-207ENST00000451492 NEURL4Q96JN8 1562 aa14.9□□□□□ -0.02
USP54-207ENST00000451492 NLRP1Q9C000 1473 aa14.89□□□□□ -0.03
USP54-207ENST00000451492 KANK1Q14678 1352 aa14.89□□□□□ -0.03
USP54-207ENST00000451492 FBXO41Q8TF61 875 aa14.89□□□□□ -0.03
USP54-207ENST00000451492 CERKQ8TCT0 537 aa14.88□□□□□ -0.03
USP54-207ENST00000451492 PIK3C2BO00750 1634 aa14.88□□□□□ -0.03
USP54-207ENST00000451492 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.87□□□□□ -0.03
USP54-207ENST00000451492 VWDEQ8N2E2 1590 aa14.87□□□□□ -0.03
USP54-207ENST00000451492 EFCAB6Q5THR3 1501 aa14.87□□□□□ -0.03
USP54-207ENST00000451492 UNC13BO14795 1591 aa14.86□□□□□ -0.03
USP54-207ENST00000451492 ANKRD50Q9ULJ7 1429 aa14.86□□□□□ -0.03
USP54-207ENST00000451492 LTBP4Q8N2S1 1624 aa14.86□□□□□ -0.03
USP54-207ENST00000451492 IQGAP1P46940 1657 aa14.86□□□□□ -0.03
USP54-207ENST00000451492 GCC2Q8IWJ2 1684 aa14.86□□□□□ -0.03
USP54-207ENST00000451492 TET3O43151 1660 aa14.84□□□□□ -0.03
USP54-207ENST00000451492 LMTK2Q8IWU2 1503 aa14.84□□□□□ -0.03
USP54-207ENST00000451492 PKD2Q13563 968 aa14.84□□□□□ -0.03
USP54-207ENST00000451492 SYNMO15061 1565 aa14.84□□□□□ -0.03
USP54-207ENST00000451492 MYO5BQ9ULV0 1848 aa14.83□□□□□ -0.04
USP54-207ENST00000451492 ZNF335Q9H4Z2 1342 aaPredicted RBP14.83□□□□□ -0.04
USP54-207ENST00000451492 ARHGAP31Q2M1Z3 1444 aa14.83□□□□□ -0.04
USP54-207ENST00000451492 E9PCH4 1651 aa14.81□□□□□ -0.04
USP54-207ENST00000451492 THEMISQ8N1K5 641 aaPredicted RBP14.8□□□□□ -0.04
USP54-207ENST00000451492 IQGAP3Q86VI3 1631 aa14.8□□□□□ -0.04
USP54-207ENST00000451492 NPHP4O75161 1426 aaPredicted RBP14.78□□□□□ -0.04
USP54-207ENST00000451492 ROCK1Q13464 1354 aa14.78□□□□□ -0.04
USP54-207ENST00000451492 ANKLE2Q86XL3 938 aa14.78□□□□□ -0.04
USP54-207ENST00000451492 RRBP1Q9P2E9 1410 aaKnown RBP14.77□□□□□ -0.04
USP54-207ENST00000451492 STRCP1A6NGW2 1772 aa14.77□□□□□ -0.05
USP54-207ENST00000451492 KDM5AP29375 1690 aaKnown RBP14.77□□□□□ -0.05
USP54-207ENST00000451492 ADGRB3O60242 1522 aa14.76□□□□□ -0.05
USP54-207ENST00000451492 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
USP54-207ENST00000451492 SCAF11Q99590 1463 aaKnown RBP14.75□□□□□ -0.05
USP54-207ENST00000451492 SLIT1O75093 1534 aa14.74□□□□□ -0.05
USP54-207ENST00000451492 MED14O60244 1454 aa14.74□□□□□ -0.05
USP54-207ENST00000451492 NOS1P29475 1434 aa14.74□□□□□ -0.05
USP54-207ENST00000451492 SPHKAPQ2M3C7 1700 aa14.73□□□□□ -0.05
USP54-207ENST00000451492 IQSEC2Q5JU85 1478 aa14.73□□□□□ -0.05
USP54-207ENST00000451492 RPRD2Q5VT52 1461 aaKnown RBP14.73□□□□□ -0.05
USP54-207ENST00000451492 ARHGAP23Q9P227 1491 aa14.72□□□□□ -0.05
USP54-207ENST00000451492 CPS1P31327 1500 aa14.71□□□□□ -0.05
USP54-207ENST00000451492 IDI1Q13907 227 aa14.71□□□□□ -0.05
USP54-207ENST00000451492 SENP3Q9H4L4 574 aaPredicted RBP14.71□□□□□ -0.05
USP54-207ENST00000451492 NUP155O75694 1391 aa14.71□□□□□ -0.06
USP54-207ENST00000451492 TMEM131LA2VDJ0 1609 aa14.7□□□□□ -0.06
USP54-207ENST00000451492 LTKP29376 864 aa14.69□□□□□ -0.06
USP54-207ENST00000451492 TXNDC2Q86VQ3 553 aa14.69□□□□□ -0.06
USP54-207ENST00000451492 CHGAP10645 457 aaKnown RBP14.68□□□□□ -0.06
USP54-207ENST00000451492 EID1Q9Y6B2 187 aa14.68□□□□□ -0.06
USP54-207ENST00000451492 TMEM2Q9UHN6 1383 aa14.68□□□□□ -0.06
USP54-207ENST00000451492 NAIPQ13075 1403 aa14.67□□□□□ -0.06
USP54-207ENST00000451492 UBAP1LF5GYI3 381 aa14.67□□□□□ -0.06
USP54-207ENST00000451492 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
USP54-207ENST00000451492 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
USP54-207ENST00000451492 BCANQ96GW7 911 aa14.64□□□□□ -0.07
USP54-207ENST00000451492 SLC52A1Q9NWF4 448 aa14.64□□□□□ -0.07
USP54-207ENST00000451492 KIF1BO60333 1816 aa14.63□□□□□ -0.07
USP54-207ENST00000451492 CLTCL1P53675 1640 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms