RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 TSPY4P0CV99 314 aa21.8■■□□□ 1.08
SREBF1-207ENST00000447641 TSPY10P0CW01 314 aa21.8■■□□□ 1.08
SREBF1-207ENST00000447641 ABCC5O15440 1437 aa21.8■■□□□ 1.08
SREBF1-207ENST00000447641 CEP170BQ9Y4F5 1589 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-207ENST00000447641 DNMT1P26358 1616 aaKnown RBP21.78■■□□□ 1.08
SREBF1-207ENST00000447641 ZMYM3Q14202 1370 aa21.77■■□□□ 1.08
SREBF1-207ENST00000447641 ADGBQ8N7X0 1667 aa21.77■■□□□ 1.08
SREBF1-207ENST00000447641 A2MP01023 1474 aa21.76■■□□□ 1.07
SREBF1-207ENST00000447641 PLA2R1Q13018 1463 aa21.76■■□□□ 1.07
SREBF1-207ENST00000447641 CROCC2H7BZ55 1655 aa21.75■■□□□ 1.07
SREBF1-207ENST00000447641 DAPK1P53355 1430 aa21.75■■□□□ 1.07
SREBF1-207ENST00000447641 ESF1Q9H501 851 aaKnown RBP21.75■■□□□ 1.07
SREBF1-207ENST00000447641 SHANK2Q9UPX8 1470 aa21.75■■□□□ 1.07
SREBF1-207ENST00000447641 PTPRKQ15262 1439 aa21.74■■□□□ 1.07
SREBF1-207ENST00000447641 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.74■■□□□ 1.075e-15■■■■□ 23.7
SREBF1-207ENST00000447641 ZNF335Q9H4Z2 1342 aaPredicted RBP21.73■■□□□ 1.07
SREBF1-207ENST00000447641 DHX29Q7Z478 1369 aaKnown RBP21.73■■□□□ 1.07
SREBF1-207ENST00000447641 NCKAP5LQ9HCH0 1330 aa21.72■■□□□ 1.07
SREBF1-207ENST00000447641 FAM50AQ14320 339 aaKnown RBP21.71■■□□□ 1.07
SREBF1-207ENST00000447641 POLR1AO95602 1720 aaPredicted RBP21.7■■□□□ 1.06
SREBF1-207ENST00000447641 RRBP1Q9P2E9 1410 aaKnown RBP21.7■■□□□ 1.06
SREBF1-207ENST00000447641 NEURL4Q96JN8 1562 aa21.67■■□□□ 1.06
SREBF1-207ENST00000447641 ADGRL2O95490 1459 aa21.64■■□□□ 1.06
SREBF1-207ENST00000447641 DUOX2Q9NRD8 1548 aa21.62■■□□□ 1.05
SREBF1-207ENST00000447641 A2ML1A8K2U0 1454 aa21.62■■□□□ 1.05
SREBF1-207ENST00000447641 ANKRD30AQ9BXX3 1397 aa21.61■■□□□ 1.05
SREBF1-207ENST00000447641 KIF15Q9NS87 1388 aa21.61■■□□□ 1.05
SREBF1-207ENST00000447641 CHIC2Q9UKJ5 165 aa21.61■■□□□ 1.05
SREBF1-207ENST00000447641 RRP7BPQ9NSQ0 103 aa21.6■■□□□ 1.05
SREBF1-207ENST00000447641 PPP6R1Q9UPN7 881 aa21.6■■□□□ 1.05
SREBF1-207ENST00000447641 KIF3BO15066 747 aa21.59■■□□□ 1.05
SREBF1-207ENST00000447641 PKD2Q13563 968 aa21.59■■□□□ 1.05
SREBF1-207ENST00000447641 EIF2AK4Q9P2K8 1649 aaKnown RBP21.58■■□□□ 1.05
SREBF1-207ENST00000447641 GGT6Q6P531 493 aa21.58■■□□□ 1.05
SREBF1-207ENST00000447641 UBAP1LF5GYI3 381 aa21.57■■□□□ 1.04
SREBF1-207ENST00000447641 ROCK1Q13464 1354 aa21.57■■□□□ 1.04
SREBF1-207ENST00000447641 ALKQ9UM73 1620 aa21.56■■□□□ 1.04
SREBF1-207ENST00000447641 MED1Q15648 1581 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-207ENST00000447641 ERBINQ96RT1 1412 aa21.55■■□□□ 1.04
SREBF1-207ENST00000447641 RNF17Q9BXT8 1623 aaKnown RBP21.55■■□□□ 1.04
SREBF1-207ENST00000447641 KDM5DQ9BY66 1539 aa21.55■■□□□ 1.04
SREBF1-207ENST00000447641 VWDEQ8N2E2 1590 aa21.53■■□□□ 1.04
SREBF1-207ENST00000447641 PZPP20742 1482 aa21.53■■□□□ 1.04
SREBF1-207ENST00000447641 FAM135AQ9P2D6 1515 aa21.53■■□□□ 1.04
SREBF1-207ENST00000447641 CPS1P31327 1500 aa21.51■■□□□ 1.03
SREBF1-207ENST00000447641 MROH1Q8NDA8 1641 aa21.51■■□□□ 1.03
SREBF1-207ENST00000447641 STRCP1A6NGW2 1772 aa21.51■■□□□ 1.03
SREBF1-207ENST00000447641 ITGAEP38570 1179 aa21.49■■□□□ 1.03
SREBF1-207ENST00000447641 TNRQ92752 1358 aa21.48■■□□□ 1.03
SREBF1-207ENST00000447641 DEPDC5O75140 1603 aa21.48■■□□□ 1.03
SREBF1-207ENST00000447641 ANKRD50Q9ULJ7 1429 aa21.47■■□□□ 1.03
SREBF1-207ENST00000447641 FBXO31Q5XUX0 539 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-207ENST00000447641 PRDM15P57071 1507 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-207ENST00000447641 IQGAP1P46940 1657 aa21.44■■□□□ 1.02
SREBF1-207ENST00000447641 WASHC2CQ9Y4E1 1318 aa21.44■■□□□ 1.02
SREBF1-207ENST00000447641 HSPA1LP34931 641 aa21.43■■□□□ 1.02
SREBF1-207ENST00000447641 MED14O60244 1454 aa21.43■■□□□ 1.02
SREBF1-207ENST00000447641 ABCC3O15438 1527 aa21.42■■□□□ 1.02
SREBF1-207ENST00000447641 UGGT1Q9NYU2 1555 aa21.42■■□□□ 1.02
SREBF1-207ENST00000447641 ZC3H13Q5T200 1668 aaKnown RBP21.41■■□□□ 1.02
SREBF1-207ENST00000447641 NLRP1Q9C000 1473 aa21.4■■□□□ 1.02
SREBF1-207ENST00000447641 NAIPQ13075 1403 aa21.38■■□□□ 1.01
SREBF1-207ENST00000447641 CEP152O94986 1710 aa21.38■■□□□ 1.01
SREBF1-207ENST00000447641 NPHP4O75161 1426 aaPredicted RBP21.38■■□□□ 1.01
SREBF1-207ENST00000447641 SYNMO15061 1565 aa21.37■■□□□ 1.01
SREBF1-207ENST00000447641 LMTK2Q8IWU2 1503 aa21.36■■□□□ 1.01
SREBF1-207ENST00000447641 PIP4K2BP78356 416 aa21.36■■□□□ 1.01
SREBF1-207ENST00000447641 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
SREBF1-207ENST00000447641 UNC13BO14795 1591 aa21.36■■□□□ 1.01
SREBF1-207ENST00000447641 UBR1Q8IWV7 1749 aa21.35■■□□□ 1.01
SREBF1-207ENST00000447641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.35■■□□□ 1.01
SREBF1-207ENST00000447641 KANK1Q14678 1352 aa21.35■■□□□ 1.01
SREBF1-207ENST00000447641 GCC2Q8IWJ2 1684 aa21.34■■□□□ 1.01
SREBF1-207ENST00000447641 XIRP1Q702N8 1843 aaKnown RBP21.34■■□□□ 1.01
SREBF1-207ENST00000447641 SCAF1Q9H7N4 1312 aaKnown RBP21.34■■□□□ 1.01
SREBF1-207ENST00000447641 ARHGAP31Q2M1Z3 1444 aa21.34■■□□□ 1.01
SREBF1-207ENST00000447641 LRRC7Q96NW7 1537 aa21.32■■□□□ 1
SREBF1-207ENST00000447641 ERVK-7P63135 1459 aa21.32■■□□□ 1
SREBF1-207ENST00000447641 CFAP65Q6ZU64 1925 aaKnown RBP21.31■■□□□ 1
SREBF1-207ENST00000447641 TOM1O60784 492 aa21.31■■□□□ 1
SREBF1-207ENST00000447641 ANKLE2Q86XL3 938 aa21.29■■□□□ 1
SREBF1-207ENST00000447641 IQGAP3Q86VI3 1631 aa21.27■■□□□ 1
SREBF1-207ENST00000447641 THEMISQ8N1K5 641 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-207ENST00000447641 EFCAB6Q5THR3 1501 aa21.25■□□□□ 0.99
SREBF1-207ENST00000447641 TET3O43151 1660 aa21.25■□□□□ 0.99
SREBF1-207ENST00000447641 NUP155O75694 1391 aa21.24■□□□□ 0.99
SREBF1-207ENST00000447641 RPRD2Q5VT52 1461 aaKnown RBP21.22■□□□□ 0.99
SREBF1-207ENST00000447641 ARHGAP23Q9P227 1491 aa21.22■□□□□ 0.99
SREBF1-207ENST00000447641 SLIT1O75093 1534 aa21.21■□□□□ 0.99
SREBF1-207ENST00000447641 SCAF11Q99590 1463 aaKnown RBP21.2■□□□□ 0.98
SREBF1-207ENST00000447641 NOS1P29475 1434 aa21.19■□□□□ 0.98
SREBF1-207ENST00000447641 PIK3C2BO00750 1634 aa21.18■□□□□ 0.98
SREBF1-207ENST00000447641 SETD5Q9C0A6 1442 aa21.18■□□□□ 0.98
SREBF1-207ENST00000447641 E9PCH4 1651 aa21.18■□□□□ 0.98
SREBF1-207ENST00000447641 SENP3Q9H4L4 574 aaPredicted RBP21.14■□□□□ 0.97
SREBF1-207ENST00000447641 ACIN1Q9UKV3 1341 aaKnown RBP21.13■□□□□ 0.97
SREBF1-207ENST00000447641 LTKP29376 864 aa21.12■□□□□ 0.97
SREBF1-207ENST00000447641 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-207ENST00000447641 KDM5AP29375 1690 aaKnown RBP21.12■□□□□ 0.97
SREBF1-207ENST00000447641 TRIM52Q96A61 297 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms