RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.16■■□□□ 1.3
SHANK3-203ENST00000445220 ST18O60284 1047 aa23.15■■□□□ 1.3
SHANK3-203ENST00000445220 ZBED9Q6R2W3 1325 aa23.14■■□□□ 1.3
SHANK3-203ENST00000445220 SAFB2Q14151 953 aaKnown RBP eCLIP23.14■■□□□ 1.29
SHANK3-203ENST00000445220 FAM43AQ8N2R8 423 aa23.14■■□□□ 1.29
SHANK3-203ENST00000445220 NOC3LQ8WTT2 800 aaKnown RBP23.12■■□□□ 1.29
SHANK3-203ENST00000445220 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
SHANK3-203ENST00000445220 PKNOX2Q96KN3 472 aa23.12■■□□□ 1.29
SHANK3-203ENST00000445220 CENPJQ9HC77 1338 aaPredicted RBP23.12■■□□□ 1.29
SHANK3-203ENST00000445220 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
SHANK3-203ENST00000445220 SPAG9O60271 1321 aaKnown RBP23.12■■□□□ 1.29
SHANK3-203ENST00000445220 PHLDB1Q86UU1 1377 aa23.11■■□□□ 1.29
SHANK3-203ENST00000445220 SETQ01105 290 aaPredicted RBP23.11■■□□□ 1.29
SHANK3-203ENST00000445220 STK26Q9P289 416 aa23.11■■□□□ 1.29
SHANK3-203ENST00000445220 KIF3BO15066 747 aa23.11■■□□□ 1.29
SHANK3-203ENST00000445220 RRP1P56182 461 aaKnown RBP23.11■■□□□ 1.29
SHANK3-203ENST00000445220 HNRNPMP52272 730 aaKnown RBP eCLIP23.1■■□□□ 1.29
SHANK3-203ENST00000445220 EXOC6Q8TAG9 804 aa23.1■■□□□ 1.29
SHANK3-203ENST00000445220 DHX57Q6P158 1386 aaKnown RBP23.1■■□□□ 1.29
SHANK3-203ENST00000445220 SMC4Q9NTJ3 1288 aa23.09■■□□□ 1.29
SHANK3-203ENST00000445220 U2AF1L5P0DN76 240 aaPredicted RBP23.08■■□□□ 1.29
SHANK3-203ENST00000445220 U2AF1Q01081 240 aaKnown RBP eCLIP23.08■■□□□ 1.29
SHANK3-203ENST00000445220 ANO8Q9HCE9 1232 aaPredicted RBP23.08■■□□□ 1.28
SHANK3-203ENST00000445220 MAP7D2Q96T17 732 aa23.07■■□□□ 1.28
SHANK3-203ENST00000445220 CHMP4AQ9BY43 222 aa23.06■■□□□ 1.28
SHANK3-203ENST00000445220 CLUAP1Q96AJ1 413 aa23.06■■□□□ 1.28
SHANK3-203ENST00000445220 CHMP5Q9NZZ3 219 aa23.05■■□□□ 1.28
SHANK3-203ENST00000445220 CCDC34Q96HJ3 373 aa23.05■■□□□ 1.28
SHANK3-203ENST00000445220 NFKBIBQ15653 356 aa23.05■■□□□ 1.28
SHANK3-203ENST00000445220 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
SHANK3-203ENST00000445220 MTERF4Q7Z6M4 381 aaKnown RBP23.04■■□□□ 1.28
SHANK3-203ENST00000445220 TERF2IPQ9NYB0 399 aa23.04■■□□□ 1.28
SHANK3-203ENST00000445220 HMMRO75330 724 aa23.03■■□□□ 1.28
SHANK3-203ENST00000445220 GPS2Q13227 327 aa23.03■■□□□ 1.28
SHANK3-203ENST00000445220 KIF16BQ96L93 1317 aa23.02■■□□□ 1.27
SHANK3-203ENST00000445220 SOX12O15370 315 aa23.01■■□□□ 1.27
SHANK3-203ENST00000445220 NOL8Q76FK4 1167 aaKnown RBP23■■□□□ 1.27
SHANK3-203ENST00000445220 KIF15Q9NS87 1388 aa23■■□□□ 1.27
SHANK3-203ENST00000445220 TPM3P06753 285 aa22.99■■□□□ 1.27
SHANK3-203ENST00000445220 CRBNQ96SW2 442 aa22.99■■□□□ 1.27
SHANK3-203ENST00000445220 PRKRIP1Q9H875 184 aaPredicted RBP22.99■■□□□ 1.27
SHANK3-203ENST00000445220 TRIM6-TRIM34B2RNG4 842 aa22.99■■□□□ 1.27
SHANK3-203ENST00000445220 FOXD4L5Q5VV16 416 aaPredicted RBP22.99■■□□□ 1.27
SHANK3-203ENST00000445220 FOXD4L4Q8WXT5 416 aaPredicted RBP22.99■■□□□ 1.27
SHANK3-203ENST00000445220 MYBBP1AQ9BQG0 1328 aaKnown RBP22.99■■□□□ 1.27
SHANK3-203ENST00000445220 ATP6V1DQ9Y5K8 247 aa22.99■■□□□ 1.27
SHANK3-203ENST00000445220 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
SHANK3-203ENST00000445220 PRKCSHP14314 528 aaPredicted RBP22.98■■□□□ 1.27
SHANK3-203ENST00000445220 TEX35Q5T0J7 233 aa22.98■■□□□ 1.27
SHANK3-203ENST00000445220 PTPRGP23470 1445 aa22.98■■□□□ 1.27
SHANK3-203ENST00000445220 MRE11P49959 708 aa22.97■■□□□ 1.27
SHANK3-203ENST00000445220 CGNL1Q0VF96 1302 aa22.97■■□□□ 1.27
SHANK3-203ENST00000445220 UACAQ9BZF9 1416 aa22.97■■□□□ 1.27
SHANK3-203ENST00000445220 HSP90B1P14625 803 aaKnown RBP22.96■■□□□ 1.27
SHANK3-203ENST00000445220 WASHC2CQ9Y4E1 1318 aa22.96■■□□□ 1.27
SHANK3-203ENST00000445220 PLIN1O60240 522 aa22.96■■□□□ 1.27
SHANK3-203ENST00000445220 A0A0U1RQG5 324 aaPredicted RBP22.96■■□□□ 1.27
SHANK3-203ENST00000445220 TPM2P07951 284 aa22.96■■□□□ 1.27
SHANK3-203ENST00000445220 GOLGA6L19H0YKK7 550 aa22.95■■□□□ 1.27
SHANK3-203ENST00000445220 MRC2Q9UBG0 1479 aa22.95■■□□□ 1.26
SHANK3-203ENST00000445220 CCDC146Q8IYE0 955 aa22.93■■□□□ 1.26
SHANK3-203ENST00000445220 KIF3AQ9Y496 699 aa22.92■■□□□ 1.26
SHANK3-203ENST00000445220 NPHP1O15259 732 aa22.92■■□□□ 1.26
SHANK3-203ENST00000445220 IL27Q8NEV9 243 aa22.92■■□□□ 1.26
SHANK3-203ENST00000445220 NESP48681 1621 aa22.92■■□□□ 1.26
SHANK3-203ENST00000445220 GPATCH3Q96I76 525 aa22.92■■□□□ 1.26
SHANK3-203ENST00000445220 BRPF3Q9ULD4 1205 aa22.92■■□□□ 1.26
SHANK3-203ENST00000445220 IGF1RP08069 1367 aa22.92■■□□□ 1.26
SHANK3-203ENST00000445220 BECN2A8MW95 431 aa22.91■■□□□ 1.26
SHANK3-203ENST00000445220 ZNF592Q92610 1267 aa22.91■■□□□ 1.26
SHANK3-203ENST00000445220 LMOD3Q0VAK6 560 aa22.9■■□□□ 1.26
SHANK3-203ENST00000445220 FGD5Q6ZNL6 1462 aa22.89■■□□□ 1.26
SHANK3-203ENST00000445220 CCAR2Q8N163 923 aaKnown RBP22.89■■□□□ 1.25
SHANK3-203ENST00000445220 R3HCC1Q9Y3T6 440 aaKnown RBP22.89■■□□□ 1.25
SHANK3-203ENST00000445220 HDAC5Q9UQL6 1122 aa22.88■■□□□ 1.25
SHANK3-203ENST00000445220 ST20-MTHFSA0A0A6YYL1 179 aa22.88■■□□□ 1.25
SHANK3-203ENST00000445220 GAPVD1Q14C86 1478 aa22.88■■□□□ 1.25
SHANK3-203ENST00000445220 STK31Q9BXU1 1019 aa22.87■■□□□ 1.25
SHANK3-203ENST00000445220 EID1Q9Y6B2 187 aa22.87■■□□□ 1.25
SHANK3-203ENST00000445220 SF3A1Q15459 793 aaKnown RBP22.86■■□□□ 1.25
SHANK3-203ENST00000445220 MYOM3Q5VTT5 1437 aa22.86■■□□□ 1.25
SHANK3-203ENST00000445220 E9PSI1 815 aa22.86■■□□□ 1.25
SHANK3-203ENST00000445220 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.259e-7■■■■■ 27.1
SHANK3-203ENST00000445220 PAK3O75914 559 aaPredicted RBP22.85■■□□□ 1.25
SHANK3-203ENST00000445220 DIAPH3Q9NSV4 1193 aa22.85■■□□□ 1.25
SHANK3-203ENST00000445220 CUX1P39880 1505 aa22.83■■□□□ 1.25
SHANK3-203ENST00000445220 ANKRD45Q5TZF3 282 aa22.83■■□□□ 1.25
SHANK3-203ENST00000445220 NUCB2P80303 420 aa22.82■■□□□ 1.24
SHANK3-203ENST00000445220 NOM1Q5C9Z4 860 aaKnown RBP22.82■■□□□ 1.24
SHANK3-203ENST00000445220 ZKSCAN2Q63HK3 967 aa22.82■■□□□ 1.24
SHANK3-203ENST00000445220 NASPP49321 788 aaPredicted RBP22.82■■□□□ 1.24
SHANK3-203ENST00000445220 CCDC39Q9UFE4 941 aa22.82■■□□□ 1.24
SHANK3-203ENST00000445220 COG6Q9Y2V7 657 aa22.82■■□□□ 1.24
SHANK3-203ENST00000445220 USP47Q96K76 1375 aa22.81■■□□□ 1.24
SHANK3-203ENST00000445220 CLSTN1O94985 981 aa22.81■■□□□ 1.24
SHANK3-203ENST00000445220 FOXD4L6Q3SYB3 417 aaPredicted RBP22.81■■□□□ 1.24
SHANK3-203ENST00000445220 FOXD4L3Q6VB84 417 aaPredicted RBP22.81■■□□□ 1.24
SHANK3-203ENST00000445220 PANK3Q9H999 370 aa22.8■■□□□ 1.24
SHANK3-203ENST00000445220 VGFO15240 615 aaPredicted RBP22.8■■□□□ 1.24
SHANK3-203ENST00000445220 CCDC70Q6NSX1 233 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms